Wall clock time and date at job start Sun Mar 7 2021 12:22:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81402 * 1 3 3 O 1.42096 * 108.57966 * 2 1 4 4 O 1.42103 * 108.58024 * 228.97182 * 2 1 3 5 5 C 1.81401 * 101.92259 * 114.48446 * 2 1 3 6 6 H 1.09005 * 112.85235 * 53.80099 * 5 2 1 7 7 C 1.53782 * 113.61690 * 185.00102 * 5 2 1 8 8 C 1.53781 * 87.08137 * 139.98003 * 7 5 2 9 9 H 1.08998 * 113.61220 * 219.93578 * 8 7 5 10 10 C 1.52997 * 113.61399 * 89.11534 * 8 7 5 11 11 N 1.46506 * 109.47289 * 174.99933 * 10 8 7 12 12 C 1.34774 * 120.00072 * 180.02562 * 11 10 8 13 13 O 1.21563 * 120.00203 * 0.02562 * 12 11 10 14 14 C 1.47696 * 119.99732 * 180.02562 * 12 11 10 15 15 C 1.39806 * 120.15223 * 179.72396 * 14 12 11 16 16 F 1.35098 * 120.08616 * 359.97438 * 15 14 12 17 17 C 1.38313 * 119.82850 * 179.78787 * 15 14 12 18 18 C 1.38190 * 120.14642 * 0.47068 * 17 15 14 19 19 C 1.50695 * 119.84064 * 179.76591 * 18 17 15 20 20 O 1.42904 * 109.46965 * 255.01424 * 19 18 17 21 21 Si 1.86301 * 109.47641 * 15.01432 * 19 18 17 22 22 C 1.38655 * 120.31226 * 359.78009 * 18 17 15 23 23 F 1.35099 * 119.91409 * 179.97438 * 22 18 17 24 24 C 1.38065 * 120.16880 * 359.97438 * 22 18 17 25 25 C 1.53784 * 113.61447 * 282.50213 * 5 2 1 26 26 H 1.08999 * 109.47087 * 305.51320 * 1 2 3 27 27 H 1.08994 * 109.46786 * 65.51827 * 1 2 3 28 28 H 1.09003 * 109.46864 * 185.51734 * 1 2 3 29 29 H 1.08999 * 113.61026 * 25.43282 * 7 5 2 30 30 H 1.09003 * 113.61174 * 254.52645 * 7 5 2 31 31 H 1.09001 * 109.47289 * 54.99804 * 10 8 7 32 32 H 1.09004 * 109.47261 * 295.00060 * 10 8 7 33 33 H 0.97001 * 119.99251 * 0.02562 * 11 10 8 34 34 H 1.08004 * 119.92850 * 180.22762 * 17 15 14 35 35 H 1.09002 * 109.47102 * 135.02241 * 19 18 17 36 36 H 0.96705 * 113.99757 * 60.00361 * 20 19 18 37 37 H 1.48508 * 109.99467 * 58.68304 * 21 19 18 38 38 H 1.48499 * 110.00053 * 180.02562 * 21 19 18 39 39 H 1.08002 * 120.07639 * 179.97438 * 24 22 18 40 40 H 1.08997 * 113.61599 * 105.46727 * 25 5 2 41 41 H 1.09008 * 113.61136 * 334.56272 * 25 5 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8140 0.0000 0.0000 3 8 2.2668 1.3469 0.0000 4 8 2.2668 -0.8842 -1.0161 5 6 2.1888 -0.7356 1.6153 6 1 1.6958 -1.6958 1.7678 7 6 3.6894 -0.7535 1.9509 8 6 3.2921 -0.3791 3.3885 9 1 3.9586 0.3496 3.8499 10 6 3.0231 -1.5895 4.2849 11 7 2.7710 -1.1361 5.6550 12 6 2.5089 -2.0346 6.6247 13 8 2.4822 -3.2214 6.3626 14 6 2.2542 -1.5774 8.0058 15 6 1.9763 -2.5063 9.0131 16 9 1.9393 -3.8259 8.7259 17 6 1.7431 -2.0711 10.3050 18 6 1.7747 -0.7212 10.5990 19 6 1.5144 -0.2543 12.0079 20 8 0.2044 0.3110 12.0880 21 14 1.6387 -1.7013 13.1748 22 6 2.0446 0.2056 9.6036 23 9 2.0730 1.5234 9.8999 24 6 2.2843 -0.2149 8.3106 25 6 2.0176 0.2404 2.7913 26 1 -0.3633 0.5970 0.8365 27 1 -0.3633 0.4259 -0.9352 28 1 -0.3633 -1.0229 0.0988 29 1 4.2603 0.0217 1.4397 30 1 4.1440 -1.7406 1.8665 31 1 3.8907 -2.2493 4.2744 32 1 2.1516 -2.1293 3.9146 33 1 2.7927 -0.1891 5.8642 34 1 1.5318 -2.7876 11.0851 35 1 2.2526 0.4990 12.2833 36 1 -0.5044 -0.3045 11.8559 37 1 2.9864 -2.3176 13.0777 38 1 1.3834 -1.2540 14.5676 39 1 2.4939 0.5084 7.5364 40 1 1.1226 0.0557 3.3853 41 1 2.1315 1.2874 2.5099 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17836384_12360598.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 12:22:45 Heat of formation + Delta-G solvation = -166.253305 kcal Electronic energy + Delta-G solvation = -29885.923975 eV Core-core repulsion = 25111.176030 eV Total energy + Delta-G solvation = -4774.747944 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.088 amu Computer time = 1.26 seconds Orbital eigenvalues (eV) -50.10735 -50.08600 -41.46027 -40.37970 -39.64315 -38.00531 -37.63412 -37.05482 -35.70219 -33.39050 -31.36643 -30.46012 -29.54894 -27.59223 -26.82290 -25.30657 -24.38517 -23.53993 -21.89955 -20.68654 -19.81777 -19.35799 -18.72691 -18.67401 -18.32733 -17.88724 -17.36140 -17.13462 -17.00908 -16.87836 -16.70977 -16.57920 -16.21550 -16.10316 -15.87453 -15.75859 -15.50082 -15.14638 -14.86775 -14.59994 -14.20100 -14.12657 -13.97314 -13.91659 -13.81633 -13.61514 -13.27295 -13.20836 -13.12362 -13.06604 -13.00836 -12.73437 -12.35212 -12.18286 -11.97044 -11.63216 -11.58981 -11.30921 -10.91228 -10.61441 -10.59238 -10.22685 -9.81691 -5.05558 -0.91535 -0.80695 -0.30195 1.16026 1.39538 1.61894 1.81186 1.85912 1.93797 2.24878 2.63784 2.79428 2.84963 2.92487 3.12279 3.27808 3.29692 3.41075 3.43822 3.54691 3.59207 3.62627 3.81976 4.08127 4.13636 4.17666 4.25680 4.32095 4.33783 4.39164 4.53747 4.59067 4.62243 4.69806 4.72163 4.75092 4.87905 4.92655 4.94753 4.97800 5.18569 5.31387 5.38853 6.30231 6.68742 6.98389 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.643 4.643 2 S 2.417 3.583 3 O -0.979 6.979 4 O -0.995 6.995 5 C -0.593 4.593 6 H 0.177 0.823 7 C -0.113 4.113 8 C -0.106 4.106 9 H 0.111 0.889 10 C 0.134 3.866 11 N -0.705 5.705 12 C 0.557 3.443 13 O -0.561 6.561 14 C -0.148 4.148 15 C 0.141 3.859 16 F -0.122 7.122 17 C -0.121 4.121 18 C -0.097 4.097 19 C -0.077 4.077 20 O -0.546 6.546 21 Si 0.778 3.222 22 C 0.099 3.901 23 F -0.130 7.130 24 C -0.077 4.077 25 C -0.110 4.110 26 H 0.154 0.846 27 H 0.129 0.871 28 H 0.149 0.851 29 H 0.098 0.902 30 H 0.095 0.905 31 H 0.068 0.932 32 H 0.077 0.923 33 H 0.417 0.583 34 H 0.180 0.820 35 H 0.114 0.886 36 H 0.399 0.601 37 H -0.281 1.281 38 H -0.292 1.292 39 H 0.182 0.818 40 H 0.110 0.890 41 H 0.112 0.888 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.334 1.234 3.384 5.636 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.795 4.795 2 S 2.606 3.394 3 O -0.977 6.977 4 O -0.992 6.992 5 C -0.704 4.704 6 H 0.194 0.806 7 C -0.151 4.151 8 C -0.126 4.126 9 H 0.129 0.871 10 C 0.011 3.989 11 N -0.358 5.358 12 C 0.344 3.656 13 O -0.440 6.440 14 C -0.152 4.152 15 C 0.120 3.880 16 F -0.100 7.100 17 C -0.139 4.139 18 C -0.099 4.099 19 C -0.186 4.186 20 O -0.354 6.354 21 Si 0.682 3.318 22 C 0.079 3.921 23 F -0.109 7.109 24 C -0.096 4.096 25 C -0.148 4.148 26 H 0.172 0.828 27 H 0.147 0.853 28 H 0.167 0.833 29 H 0.116 0.884 30 H 0.113 0.887 31 H 0.086 0.914 32 H 0.095 0.905 33 H 0.256 0.744 34 H 0.197 0.803 35 H 0.131 0.869 36 H 0.250 0.750 37 H -0.207 1.207 38 H -0.219 1.219 39 H 0.199 0.801 40 H 0.128 0.872 41 H 0.130 0.870 Dipole moment (debyes) X Y Z Total from point charges -3.017 0.892 3.299 4.558 hybrid contribution -0.035 0.532 0.091 0.540 sum -3.052 1.424 3.390 4.778 Atomic orbital electron populations 1.30099 1.22706 1.13610 1.13053 1.07600 0.79769 0.74456 0.77611 1.93548 1.80876 1.36062 1.87181 1.93544 1.81016 1.67795 1.56850 1.31687 1.07544 1.13370 1.17810 0.80555 1.22733 0.91227 1.04712 0.96476 1.22353 0.98795 0.97196 0.94233 0.87071 1.21262 1.02123 0.96057 0.79488 1.45722 1.70937 1.10631 1.08534 1.18016 0.77034 0.85701 0.84824 1.90881 1.52265 1.17718 1.83159 1.19829 1.08121 0.93532 0.93762 1.17803 0.99003 0.77959 0.93239 1.91613 1.92996 1.31338 1.94095 1.20992 1.02156 0.95425 0.95304 1.20565 0.99532 0.92453 0.97352 1.25244 0.88549 1.08706 0.96145 1.86560 1.14373 1.43150 1.91360 0.93818 0.84084 0.78277 0.75612 1.17411 1.02993 0.78191 0.93476 1.91568 1.93812 1.31596 1.93880 1.21345 0.97638 0.94465 0.96180 1.22952 1.00170 0.98148 0.93508 0.82792 0.85252 0.83280 0.88390 0.88670 0.91365 0.90496 0.74439 0.80297 0.86891 0.75008 1.20737 1.21900 0.80124 0.87168 0.87019 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.64 6.46 10.62 113.37 1.20 7.66 16 2 S 2.42 -6.76 5.30 -56.49 -0.30 -7.06 16 3 O -0.98 -4.61 17.34 -127.37 -2.21 -6.81 16 4 O -0.99 -7.48 18.10 -127.37 -2.31 -9.78 16 5 C -0.59 5.41 3.81 31.12 0.12 5.52 16 6 H 0.18 -2.40 7.72 -2.38 -0.02 -2.42 16 7 C -0.11 0.79 7.26 31.12 0.23 1.01 16 8 C -0.11 1.08 3.94 -10.27 -0.04 1.04 16 9 H 0.11 -1.38 8.14 -2.39 -0.02 -1.40 16 10 C 0.13 -0.89 5.35 86.38 0.46 -0.42 16 11 N -0.71 4.70 5.51 -466.11 -2.57 2.13 16 12 C 0.56 0.57 7.77 86.74 0.67 1.25 16 13 O -0.56 -5.78 15.34 -3.91 -0.06 -5.84 16 14 C -0.15 0.27 5.88 -20.06 -0.12 0.16 16 15 C 0.14 0.00 7.28 22.67 0.17 0.16 16 16 F -0.12 -0.70 15.55 44.97 0.70 0.00 16 17 C -0.12 0.61 8.62 22.28 0.19 0.80 16 18 C -0.10 0.42 5.27 -19.78 -0.10 0.32 16 19 C -0.08 0.32 2.44 71.23 0.17 0.50 16 20 O -0.55 1.86 12.88 -148.98 -1.92 -0.06 16 21 Si 0.78 -4.47 29.90 68.60 2.05 -2.42 16 22 C 0.10 -0.33 7.23 22.33 0.16 -0.17 16 23 F -0.13 0.00 16.73 44.97 0.75 0.75 16 24 C -0.08 0.50 9.51 22.57 0.21 0.72 16 25 C -0.11 1.29 7.16 31.12 0.22 1.51 16 26 H 0.15 -2.28 8.14 -2.39 -0.02 -2.30 16 27 H 0.13 -1.17 8.14 -2.39 -0.02 -1.19 16 28 H 0.15 -2.04 8.14 -2.39 -0.02 -2.06 16 29 H 0.10 -0.58 8.10 -2.39 -0.02 -0.60 16 30 H 0.09 -0.68 8.10 -2.39 -0.02 -0.70 16 31 H 0.07 -0.25 8.14 -2.39 -0.02 -0.26 16 32 H 0.08 -0.47 7.39 -2.38 -0.02 -0.48 16 33 H 0.42 -5.48 6.50 -92.71 -0.60 -6.08 16 34 H 0.18 -1.83 5.10 -2.91 -0.01 -1.85 16 35 H 0.11 -0.27 7.89 -2.39 -0.02 -0.29 16 36 H 0.40 -4.94 8.70 -74.05 -0.64 -5.58 16 37 H -0.28 0.17 7.11 99.48 0.71 0.88 16 38 H -0.29 -0.58 7.11 99.48 0.71 0.13 16 39 H 0.18 -2.44 6.41 -2.91 -0.02 -2.45 16 40 H 0.11 -1.69 8.10 -2.39 -0.02 -1.71 16 41 H 0.11 -1.26 7.48 -2.38 -0.02 -1.28 16 Total: 0.00 -36.29 365.21 -2.40 -38.69 By element: Atomic # 1 Polarization: -29.56 SS G_CDS: -0.09 Total: -29.65 kcal Atomic # 6 Polarization: 16.50 SS G_CDS: 3.55 Total: 20.05 kcal Atomic # 7 Polarization: 4.70 SS G_CDS: -2.57 Total: 2.13 kcal Atomic # 8 Polarization: -15.99 SS G_CDS: -6.49 Total: -22.49 kcal Atomic # 9 Polarization: -0.70 SS G_CDS: 1.45 Total: 0.75 kcal Atomic # 14 Polarization: -4.47 SS G_CDS: 2.05 Total: -2.42 kcal Atomic # 16 Polarization: -6.76 SS G_CDS: -0.30 Total: -7.06 kcal Total: -36.29 -2.40 -38.69 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17836384_12360598.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -127.567 kcal (2) G-P(sol) polarization free energy of solvation -36.288 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -163.855 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.398 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.686 kcal (6) G-S(sol) free energy of system = (1) + (5) -166.253 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.27 seconds