Wall clock time and date at job start Sun Mar 7 2021 12:26:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35895 * 116.99914 * 2 1 4 4 C 1.38615 * 120.02968 * 180.02562 * 3 2 1 5 5 C 1.38650 * 119.89586 * 180.02562 * 4 3 2 6 6 O 1.35897 * 120.03111 * 179.97438 * 5 4 3 7 7 C 1.42896 * 116.99925 * 0.02562 * 6 5 4 8 8 C 1.50696 * 109.47321 * 179.97438 * 7 6 5 9 9 O 1.21285 * 119.99835 * 0.02562 * 8 7 6 10 10 N 1.34774 * 120.00231 * 179.97438 * 8 7 6 11 11 C 1.46498 * 120.00235 * 180.02562 * 10 8 7 12 12 C 1.52998 * 109.47536 * 180.02562 * 11 10 8 13 13 H 1.09002 * 112.84961 * 316.19967 * 12 11 10 14 14 C 1.53783 * 113.61112 * 87.49818 * 12 11 10 15 15 C 1.53790 * 87.08064 * 89.12165 * 14 12 11 16 16 H 1.09005 * 113.68475 * 270.87234 * 15 14 12 17 17 S 1.81398 * 113.61610 * 139.98039 * 15 14 12 18 18 C 1.81391 * 101.92304 * 82.50202 * 17 15 14 19 19 O 1.42105 * 108.57879 * 328.01282 * 17 15 14 20 20 O 1.42097 * 108.57629 * 196.99043 * 17 15 14 21 21 C 1.53773 * 113.61841 * 184.99814 * 12 11 10 22 22 C 1.38758 * 119.94363 * 0.25296 * 5 4 3 23 23 C 1.50700 * 119.97424 * 179.74579 * 22 5 4 24 24 O 1.42901 * 109.46895 * 284.99640 * 23 22 5 25 25 Si 1.86295 * 109.47020 * 165.00240 * 23 22 5 26 26 C 1.38198 * 120.04960 * 359.49229 * 22 5 4 27 27 C 1.38152 * 120.11470 * 0.50665 * 26 22 5 28 28 H 1.08997 * 109.46809 * 180.02562 * 1 2 3 29 29 H 1.08996 * 109.47271 * 300.00451 * 1 2 3 30 30 H 1.08998 * 109.47306 * 60.00562 * 1 2 3 31 31 H 1.08001 * 120.04749 * 0.03761 * 4 3 2 32 32 H 1.09004 * 109.47349 * 59.99667 * 7 6 5 33 33 H 1.09005 * 109.46874 * 300.00215 * 7 6 5 34 34 H 0.97001 * 120.00295 * 0.02562 * 10 8 7 35 35 H 1.09004 * 109.47220 * 59.99739 * 11 10 8 36 36 H 1.09005 * 109.47279 * 300.00119 * 11 10 8 37 37 H 1.08993 * 113.61882 * 334.57429 * 14 12 11 38 38 H 1.09000 * 113.61329 * 203.66322 * 14 12 11 39 39 H 1.09003 * 109.47583 * 300.00163 * 18 17 15 40 40 H 1.09003 * 109.47643 * 59.99714 * 18 17 15 41 41 H 1.09003 * 109.47254 * 179.97438 * 18 17 15 42 42 H 1.08996 * 113.61756 * 156.33899 * 21 12 11 43 43 H 1.09002 * 113.69227 * 25.44093 * 21 12 11 44 44 H 1.08990 * 109.46848 * 44.99989 * 23 22 5 45 45 H 0.96698 * 113.99876 * 179.97438 * 24 23 22 46 46 H 1.48498 * 110.00398 * 59.99969 * 25 23 22 47 47 H 1.48504 * 109.99977 * 181.31900 * 25 23 22 48 48 H 1.08004 * 119.94615 * 180.25591 * 26 22 5 49 49 H 1.08001 * 119.97598 * 179.72593 * 27 26 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2108 0.0000 4 6 3.4301 1.2841 -0.0005 5 6 4.0567 2.5210 0.0000 6 8 5.4136 2.5960 0.0000 7 6 6.1316 1.3606 -0.0011 8 6 7.6124 1.6402 -0.0016 9 8 8.0134 2.7848 -0.0005 10 7 8.4912 0.6183 -0.0021 11 6 9.9307 0.8901 -0.0020 12 6 10.6996 -0.4327 -0.0034 13 1 10.2855 -1.1636 0.6912 14 6 10.9558 -0.9947 -1.4117 15 6 12.2580 -0.1766 -1.4158 16 1 12.1377 0.8360 -1.8009 17 16 13.6630 -1.0507 -2.1590 18 6 13.3967 -0.7522 -3.9282 19 8 13.5156 -2.4414 -1.9072 20 8 14.8620 -0.3976 -1.7652 21 6 12.2227 -0.2601 0.1194 22 6 3.2971 3.6822 0.0064 23 6 3.9774 5.0269 0.0128 24 8 4.5043 5.2879 1.3152 25 14 2.7435 6.3491 -0.4343 26 6 1.9172 3.6065 0.0016 27 6 1.2905 2.3753 0.0010 28 1 -0.3633 -1.0277 0.0005 29 1 -0.3633 0.5139 0.8899 30 1 -0.3634 0.5137 -0.8900 31 1 4.0196 0.3792 -0.0016 32 1 5.8699 0.7890 -0.8916 33 1 5.8699 0.7874 0.8884 34 1 8.1705 -0.2972 -0.0026 35 1 10.1925 1.4620 0.8883 36 1 10.1925 1.4629 -0.8917 37 1 10.2293 -0.6627 -2.1532 38 1 11.1174 -2.0726 -1.4289 39 1 12.4318 -1.1634 -4.2249 40 1 13.4094 0.3204 -4.1218 41 1 14.1890 -1.2339 -4.5013 42 1 12.7305 -1.1370 0.5207 43 1 12.5202 0.6646 0.6139 44 1 4.7893 5.0267 -0.7144 45 1 4.9575 6.1385 1.3929 46 1 1.6314 6.3597 0.5497 47 1 3.4092 7.6763 -0.4626 48 1 1.3276 4.5114 0.0024 49 1 0.2120 2.3187 0.0018 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17836384_4974312.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 12:26:50 Heat of formation + Delta-G solvation = -137.682304 kcal Electronic energy + Delta-G solvation = -33102.485744 eV Core-core repulsion = 28319.445060 eV Total energy + Delta-G solvation = -4783.040684 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 386.137 amu Computer time = 2.72 seconds Orbital eigenvalues (eV) -41.80465 -41.15739 -40.33646 -39.62889 -38.15093 -38.00418 -37.05658 -36.99221 -35.59738 -32.37748 -31.62225 -30.77796 -30.39887 -28.63273 -28.32571 -27.14553 -26.00988 -25.38245 -23.58552 -22.34818 -21.76782 -20.64181 -19.90815 -19.83799 -18.64632 -18.37820 -18.37076 -17.81192 -17.51983 -17.33595 -17.25967 -17.01173 -16.82814 -16.74796 -16.72466 -16.09988 -15.97203 -15.57535 -15.46062 -15.17261 -14.87010 -14.64280 -14.41975 -14.28311 -14.14896 -13.92477 -13.88693 -13.72463 -13.62390 -13.49129 -13.34030 -13.24611 -13.20121 -13.04962 -12.89656 -12.58053 -12.43245 -12.10873 -11.95387 -11.93671 -11.87432 -11.70360 -11.57591 -11.22818 -10.92431 -10.29534 -10.26547 -9.67341 -9.05317 -4.91563 -1.08838 0.24260 0.35620 1.36010 1.36934 1.44011 1.62109 1.63821 1.99510 2.15855 2.42470 2.49043 2.58298 2.68428 3.00879 3.17270 3.22954 3.31389 3.49275 3.52849 3.69635 3.72864 3.79159 3.80579 3.87574 3.94853 3.96281 4.01110 4.08805 4.11341 4.16017 4.28842 4.30172 4.30664 4.37310 4.39143 4.51026 4.53747 4.55004 4.58882 4.61019 4.66795 4.69200 4.93420 5.04415 5.18085 5.25035 5.33841 5.47235 6.09076 6.24868 6.35491 6.64700 7.02072 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.315 6.315 3 C 0.174 3.826 4 C -0.247 4.247 5 C 0.191 3.809 6 O -0.274 6.274 7 C 0.037 3.963 8 C 0.517 3.483 9 O -0.510 6.510 10 N -0.728 5.728 11 C 0.137 3.863 12 C -0.115 4.115 13 H 0.098 0.902 14 C -0.112 4.112 15 C -0.610 4.610 16 H 0.154 0.846 17 S 2.423 3.577 18 C -0.655 4.655 19 O -0.936 6.936 20 O -0.938 6.938 21 C -0.096 4.096 22 C -0.136 4.136 23 C -0.060 4.060 24 O -0.531 6.531 25 Si 0.682 3.318 26 C -0.037 4.037 27 C -0.238 4.238 28 H 0.103 0.897 29 H 0.058 0.942 30 H 0.060 0.940 31 H 0.139 0.861 32 H 0.097 0.903 33 H 0.097 0.903 34 H 0.404 0.596 35 H 0.078 0.922 36 H 0.075 0.925 37 H 0.089 0.911 38 H 0.110 0.890 39 H 0.129 0.871 40 H 0.128 0.872 41 H 0.130 0.870 42 H 0.101 0.899 43 H 0.094 0.906 44 H 0.076 0.924 45 H 0.377 0.623 46 H -0.256 1.256 47 H -0.261 1.261 48 H 0.138 0.862 49 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.316 -2.878 -4.111 7.310 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.228 6.228 3 C 0.128 3.872 4 C -0.266 4.266 5 C 0.144 3.856 6 O -0.185 6.185 7 C -0.042 4.042 8 C 0.301 3.699 9 O -0.384 6.384 10 N -0.383 5.383 11 C 0.014 3.986 12 C -0.135 4.135 13 H 0.116 0.884 14 C -0.150 4.150 15 C -0.719 4.719 16 H 0.172 0.828 17 S 2.605 3.395 18 C -0.804 4.804 19 O -0.933 6.933 20 O -0.935 6.935 21 C -0.135 4.135 22 C -0.137 4.137 23 C -0.170 4.170 24 O -0.338 6.338 25 Si 0.584 3.416 26 C -0.055 4.055 27 C -0.257 4.257 28 H 0.121 0.879 29 H 0.077 0.923 30 H 0.079 0.921 31 H 0.156 0.844 32 H 0.115 0.885 33 H 0.114 0.886 34 H 0.239 0.761 35 H 0.096 0.904 36 H 0.093 0.907 37 H 0.107 0.893 38 H 0.129 0.871 39 H 0.147 0.853 40 H 0.147 0.853 41 H 0.148 0.852 42 H 0.119 0.881 43 H 0.113 0.887 44 H 0.094 0.906 45 H 0.224 0.776 46 H -0.181 1.181 47 H -0.186 1.186 48 H 0.156 0.844 49 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -4.774 -2.361 -3.349 6.292 hybrid contribution -0.125 0.247 0.279 0.394 sum -4.899 -2.114 -3.070 6.156 Atomic orbital electron populations 1.23147 0.77608 1.04401 1.01807 1.86069 1.22018 1.26648 1.88027 1.18675 0.91444 0.84381 0.92716 1.20351 0.92938 0.97207 1.16132 1.18375 0.81857 0.92477 0.92847 1.86228 1.14854 1.29580 1.87879 1.22504 0.90123 0.87218 1.04330 1.20002 0.87382 0.85532 0.76946 1.90794 1.79802 1.20878 1.46894 1.45760 1.06418 1.09365 1.76713 1.21189 0.78350 0.95724 1.03325 1.22459 0.95670 0.97298 0.98023 0.88383 1.22853 0.93583 1.00240 0.98320 1.31787 1.16887 1.13926 1.09282 0.82844 1.07812 0.76913 0.76190 0.78554 1.30239 1.12216 1.12145 1.25843 1.93610 1.86612 1.29184 1.83878 1.93617 1.41944 1.77061 1.80849 1.22582 0.96141 1.04775 0.90004 1.18461 0.92261 0.92092 1.10890 1.24556 1.03975 1.00373 0.88095 1.86606 1.75786 1.41666 1.29750 0.95303 0.79678 0.77210 0.89405 1.20722 0.92549 0.97893 0.94334 1.21109 1.00475 0.91674 1.12455 0.87892 0.92288 0.92148 0.84373 0.88540 0.88565 0.76142 0.90404 0.90715 0.89284 0.87124 0.85264 0.85306 0.85186 0.88069 0.88733 0.90623 0.77556 1.18068 1.18641 0.84446 0.84676 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 30. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.06 9.81 101.05 0.99 0.93 16 2 O -0.31 -0.30 10.49 -19.41 -0.20 -0.51 16 3 C 0.17 0.26 6.68 -39.24 -0.26 0.00 16 4 C -0.25 -0.34 8.97 -39.29 -0.35 -0.69 16 5 C 0.19 0.52 6.66 -39.24 -0.26 0.26 16 6 O -0.27 -0.88 8.99 -39.33 -0.35 -1.23 16 7 C 0.04 -0.03 5.22 36.00 0.19 0.16 16 8 C 0.52 0.42 7.91 -10.99 -0.09 0.33 16 9 O -0.51 -2.93 16.50 -14.36 -0.24 -3.17 16 10 N -0.73 2.01 5.56 -60.29 -0.33 1.68 16 11 C 0.14 -0.35 5.35 -4.04 -0.02 -0.37 16 12 C -0.11 0.48 3.94 -89.81 -0.35 0.13 16 13 H 0.10 -0.50 8.14 -51.93 -0.42 -0.92 16 14 C -0.11 0.52 7.16 -25.91 -0.19 0.34 16 15 C -0.61 2.43 3.82 -25.91 -0.10 2.33 16 16 H 0.15 -0.90 7.72 -51.93 -0.40 -1.30 16 17 S 2.42 -3.88 5.34 -107.50 -0.57 -4.46 16 18 C -0.65 2.78 10.62 101.05 1.07 3.85 16 19 O -0.94 -1.69 17.19 -57.83 -0.99 -2.68 16 20 O -0.94 -2.71 18.10 -57.83 -1.05 -3.76 16 21 C -0.10 0.31 7.26 -25.92 -0.19 0.12 16 22 C -0.14 -0.37 5.31 -104.44 -0.55 -0.92 16 23 C -0.06 -0.13 2.36 36.01 0.09 -0.05 16 24 O -0.53 -2.02 12.86 -35.23 -0.45 -2.48 16 25 Si 0.68 0.10 30.18 -169.99 -5.13 -5.03 16 26 C -0.04 -0.05 8.65 -39.63 -0.34 -0.39 16 27 C -0.24 -0.15 9.04 -39.41 -0.36 -0.51 16 28 H 0.10 -0.40 8.14 -51.93 -0.42 -0.82 16 29 H 0.06 -0.17 7.66 -51.93 -0.40 -0.57 16 30 H 0.06 -0.20 7.66 -51.93 -0.40 -0.60 16 31 H 0.14 -0.12 6.30 -52.49 -0.33 -0.45 16 32 H 0.10 -0.35 7.66 -51.93 -0.40 -0.74 16 33 H 0.10 -0.27 7.66 -51.93 -0.40 -0.66 16 34 H 0.40 -2.37 8.47 -40.82 -0.35 -2.71 16 35 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 36 H 0.07 -0.15 7.39 -51.93 -0.38 -0.54 16 37 H 0.09 -0.52 8.10 -51.93 -0.42 -0.94 16 38 H 0.11 -0.50 7.36 -51.93 -0.38 -0.88 16 39 H 0.13 -0.77 8.14 -51.92 -0.42 -1.19 16 40 H 0.13 -0.73 8.14 -51.92 -0.42 -1.15 16 41 H 0.13 -0.53 8.14 -51.92 -0.42 -0.95 16 42 H 0.10 -0.33 8.10 -51.93 -0.42 -0.75 16 43 H 0.09 -0.33 8.10 -51.93 -0.42 -0.75 16 44 H 0.08 0.16 7.82 -51.93 -0.41 -0.25 16 45 H 0.38 0.03 8.74 45.56 0.40 0.42 16 46 H -0.26 -0.61 6.75 56.52 0.38 -0.22 16 47 H -0.26 -0.60 7.11 56.52 0.40 -0.20 16 48 H 0.14 -0.05 4.89 -52.48 -0.26 -0.31 16 49 H 0.14 -0.22 6.29 -52.49 -0.33 -0.55 16 LS Contribution 416.61 15.07 6.28 6.28 Total: 0.00 -16.60 416.61 -10.82 -27.42 By element: Atomic # 1 Polarization: -10.53 SS G_CDS: -7.04 Total: -17.58 kcal Atomic # 6 Polarization: 6.25 SS G_CDS: -0.73 Total: 5.52 kcal Atomic # 7 Polarization: 2.01 SS G_CDS: -0.33 Total: 1.68 kcal Atomic # 8 Polarization: -10.54 SS G_CDS: -3.29 Total: -13.83 kcal Atomic # 14 Polarization: 0.10 SS G_CDS: -5.13 Total: -5.03 kcal Atomic # 16 Polarization: -3.88 SS G_CDS: -0.57 Total: -4.46 kcal Total LS contribution 6.28 Total: 6.28 kcal Total: -16.60 -10.82 -27.42 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17836384_4974312.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -110.263 kcal (2) G-P(sol) polarization free energy of solvation -16.598 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -126.862 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.821 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.419 kcal (6) G-S(sol) free energy of system = (1) + (5) -137.682 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.73 seconds