Wall clock time and date at job start Sun Mar 7 2021 12:26:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35895 * 116.99914 * 2 1 4 4 C 1.38615 * 120.02968 * 180.02562 * 3 2 1 5 5 C 1.38650 * 119.89586 * 180.02562 * 4 3 2 6 6 O 1.35897 * 120.03111 * 179.97438 * 5 4 3 7 7 C 1.42896 * 116.99925 * 0.02562 * 6 5 4 8 8 C 1.50696 * 109.47321 * 179.97438 * 7 6 5 9 9 O 1.21285 * 119.99835 * 0.02562 * 8 7 6 10 10 N 1.34774 * 120.00231 * 179.97438 * 8 7 6 11 11 C 1.46498 * 120.00235 * 180.02562 * 10 8 7 12 12 C 1.52998 * 109.47536 * 180.02562 * 11 10 8 13 13 H 1.09002 * 112.84961 * 316.19967 * 12 11 10 14 14 C 1.53783 * 113.61112 * 87.49818 * 12 11 10 15 15 C 1.53790 * 87.08064 * 89.12165 * 14 12 11 16 16 H 1.09005 * 113.68475 * 270.87234 * 15 14 12 17 17 S 1.81398 * 113.61610 * 139.98039 * 15 14 12 18 18 C 1.81391 * 101.92304 * 82.50202 * 17 15 14 19 19 O 1.42105 * 108.57879 * 328.01282 * 17 15 14 20 20 O 1.42097 * 108.57629 * 196.99043 * 17 15 14 21 21 C 1.53773 * 113.61841 * 184.99814 * 12 11 10 22 22 C 1.38758 * 119.94363 * 0.25296 * 5 4 3 23 23 C 1.50700 * 119.97424 * 179.74579 * 22 5 4 24 24 O 1.42901 * 109.46895 * 284.99640 * 23 22 5 25 25 Si 1.86295 * 109.47020 * 165.00240 * 23 22 5 26 26 C 1.38198 * 120.04960 * 359.49229 * 22 5 4 27 27 C 1.38152 * 120.11470 * 0.50665 * 26 22 5 28 28 H 1.08997 * 109.46809 * 180.02562 * 1 2 3 29 29 H 1.08996 * 109.47271 * 300.00451 * 1 2 3 30 30 H 1.08998 * 109.47306 * 60.00562 * 1 2 3 31 31 H 1.08001 * 120.04749 * 0.03761 * 4 3 2 32 32 H 1.09004 * 109.47349 * 59.99667 * 7 6 5 33 33 H 1.09005 * 109.46874 * 300.00215 * 7 6 5 34 34 H 0.97001 * 120.00295 * 0.02562 * 10 8 7 35 35 H 1.09004 * 109.47220 * 59.99739 * 11 10 8 36 36 H 1.09005 * 109.47279 * 300.00119 * 11 10 8 37 37 H 1.08993 * 113.61882 * 334.57429 * 14 12 11 38 38 H 1.09000 * 113.61329 * 203.66322 * 14 12 11 39 39 H 1.09003 * 109.47583 * 300.00163 * 18 17 15 40 40 H 1.09003 * 109.47643 * 59.99714 * 18 17 15 41 41 H 1.09003 * 109.47254 * 179.97438 * 18 17 15 42 42 H 1.08996 * 113.61756 * 156.33899 * 21 12 11 43 43 H 1.09002 * 113.69227 * 25.44093 * 21 12 11 44 44 H 1.08990 * 109.46848 * 44.99989 * 23 22 5 45 45 H 0.96698 * 113.99876 * 179.97438 * 24 23 22 46 46 H 1.48498 * 110.00398 * 59.99969 * 25 23 22 47 47 H 1.48504 * 109.99977 * 181.31900 * 25 23 22 48 48 H 1.08004 * 119.94615 * 180.25591 * 26 22 5 49 49 H 1.08001 * 119.97598 * 179.72593 * 27 26 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2108 0.0000 4 6 3.4301 1.2841 -0.0005 5 6 4.0567 2.5210 0.0000 6 8 5.4136 2.5960 0.0000 7 6 6.1316 1.3606 -0.0011 8 6 7.6124 1.6402 -0.0016 9 8 8.0134 2.7848 -0.0005 10 7 8.4912 0.6183 -0.0021 11 6 9.9307 0.8901 -0.0020 12 6 10.6996 -0.4327 -0.0034 13 1 10.2855 -1.1636 0.6912 14 6 10.9558 -0.9947 -1.4117 15 6 12.2580 -0.1766 -1.4158 16 1 12.1377 0.8360 -1.8009 17 16 13.6630 -1.0507 -2.1590 18 6 13.3967 -0.7522 -3.9282 19 8 13.5156 -2.4414 -1.9072 20 8 14.8620 -0.3976 -1.7652 21 6 12.2227 -0.2601 0.1194 22 6 3.2971 3.6822 0.0064 23 6 3.9774 5.0269 0.0128 24 8 4.5043 5.2879 1.3152 25 14 2.7435 6.3491 -0.4343 26 6 1.9172 3.6065 0.0016 27 6 1.2905 2.3753 0.0010 28 1 -0.3633 -1.0277 0.0005 29 1 -0.3633 0.5139 0.8899 30 1 -0.3634 0.5137 -0.8900 31 1 4.0196 0.3792 -0.0016 32 1 5.8699 0.7890 -0.8916 33 1 5.8699 0.7874 0.8884 34 1 8.1705 -0.2972 -0.0026 35 1 10.1925 1.4620 0.8883 36 1 10.1925 1.4629 -0.8917 37 1 10.2293 -0.6627 -2.1532 38 1 11.1174 -2.0726 -1.4289 39 1 12.4318 -1.1634 -4.2249 40 1 13.4094 0.3204 -4.1218 41 1 14.1890 -1.2339 -4.5013 42 1 12.7305 -1.1370 0.5207 43 1 12.5202 0.6646 0.6139 44 1 4.7893 5.0267 -0.7144 45 1 4.9575 6.1385 1.3929 46 1 1.6314 6.3597 0.5497 47 1 3.4092 7.6763 -0.4626 48 1 1.3276 4.5114 0.0024 49 1 0.2120 2.3187 0.0018 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17836384_4974312.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 12:26:49 Heat of formation + Delta-G solvation = -148.120126 kcal Electronic energy + Delta-G solvation = -33102.938362 eV Core-core repulsion = 28319.445060 eV Total energy + Delta-G solvation = -4783.493302 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 386.137 amu Computer time = 1.36 seconds Orbital eigenvalues (eV) -41.82436 -41.07275 -40.22130 -39.61398 -38.25024 -38.01229 -37.09692 -37.06029 -35.57690 -32.40945 -31.61342 -30.55809 -30.28073 -28.49136 -28.17111 -26.83595 -26.06936 -25.18733 -23.58648 -22.38131 -21.74243 -20.45139 -19.89093 -19.69018 -18.56347 -18.49066 -18.31208 -17.80147 -17.49598 -17.29931 -17.13235 -16.91156 -16.87272 -16.67782 -16.65201 -15.92964 -15.91853 -15.60968 -15.40990 -15.21659 -14.80348 -14.64019 -14.13155 -14.04912 -13.96794 -13.93230 -13.78350 -13.62102 -13.58037 -13.40024 -13.23159 -13.22025 -13.19452 -13.06898 -12.74173 -12.49372 -12.41430 -11.99733 -11.97785 -11.75158 -11.63837 -11.60934 -11.58086 -11.13922 -10.87898 -10.40666 -10.22344 -9.70158 -9.10291 -4.94374 -0.92329 0.19227 0.30328 1.30680 1.41653 1.43463 1.58868 1.82974 1.91543 2.24502 2.52768 2.56448 2.63743 2.90138 3.27095 3.40943 3.43662 3.47877 3.59577 3.65093 3.72241 3.88587 3.97438 4.04633 4.06147 4.07219 4.14513 4.19349 4.24847 4.30860 4.37384 4.38464 4.43030 4.46388 4.58121 4.60810 4.61574 4.72408 4.79711 4.87369 4.92509 4.94349 4.96970 5.00516 5.20536 5.22804 5.29710 5.34074 5.45908 6.11872 6.35101 6.43220 6.60099 7.09524 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.016 3.984 2 O -0.328 6.328 3 C 0.165 3.835 4 C -0.250 4.250 5 C 0.177 3.823 6 O -0.302 6.302 7 C 0.032 3.968 8 C 0.515 3.485 9 O -0.569 6.569 10 N -0.707 5.707 11 C 0.136 3.864 12 C -0.104 4.104 13 H 0.112 0.888 14 C -0.108 4.108 15 C -0.594 4.594 16 H 0.176 0.824 17 S 2.417 3.583 18 C -0.643 4.643 19 O -0.979 6.979 20 O -0.994 6.994 21 C -0.113 4.113 22 C -0.161 4.161 23 C -0.079 4.079 24 O -0.557 6.557 25 Si 0.777 3.223 26 C -0.042 4.042 27 C -0.238 4.238 28 H 0.118 0.882 29 H 0.064 0.936 30 H 0.071 0.929 31 H 0.158 0.842 32 H 0.128 0.872 33 H 0.117 0.883 34 H 0.422 0.578 35 H 0.062 0.938 36 H 0.073 0.927 37 H 0.109 0.891 38 H 0.111 0.889 39 H 0.154 0.846 40 H 0.148 0.852 41 H 0.129 0.871 42 H 0.097 0.903 43 H 0.093 0.907 44 H 0.069 0.931 45 H 0.388 0.612 46 H -0.282 1.282 47 H -0.291 1.291 48 H 0.150 0.850 49 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.401 -3.797 -5.241 9.832 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 O -0.241 6.241 3 C 0.118 3.882 4 C -0.270 4.270 5 C 0.131 3.869 6 O -0.215 6.215 7 C -0.045 4.045 8 C 0.301 3.699 9 O -0.447 6.447 10 N -0.362 5.362 11 C 0.013 3.987 12 C -0.124 4.124 13 H 0.130 0.870 14 C -0.146 4.146 15 C -0.705 4.705 16 H 0.194 0.806 17 S 2.606 3.394 18 C -0.795 4.795 19 O -0.976 6.976 20 O -0.991 6.991 21 C -0.152 4.152 22 C -0.162 4.162 23 C -0.187 4.187 24 O -0.366 6.366 25 Si 0.681 3.319 26 C -0.060 4.060 27 C -0.257 4.257 28 H 0.136 0.864 29 H 0.083 0.917 30 H 0.090 0.910 31 H 0.175 0.825 32 H 0.145 0.855 33 H 0.135 0.865 34 H 0.260 0.740 35 H 0.081 0.919 36 H 0.091 0.909 37 H 0.128 0.872 38 H 0.130 0.870 39 H 0.172 0.828 40 H 0.167 0.833 41 H 0.148 0.852 42 H 0.116 0.884 43 H 0.112 0.888 44 H 0.087 0.913 45 H 0.237 0.763 46 H -0.209 1.209 47 H -0.218 1.218 48 H 0.168 0.832 49 H 0.175 0.825 Dipole moment (debyes) X Y Z Total from point charges -6.814 -3.380 -4.468 8.822 hybrid contribution 0.503 0.489 0.640 0.949 sum -6.312 -2.891 -3.828 7.928 Atomic orbital electron populations 1.23405 0.76036 1.05742 1.02652 1.86051 1.23719 1.26408 1.87928 1.18855 0.91720 0.84896 0.92698 1.20556 0.93348 0.97418 1.15628 1.18538 0.81837 0.93075 0.93488 1.86186 1.15306 1.31814 1.88148 1.22768 0.88582 0.86465 1.06719 1.20378 0.88394 0.85155 0.75977 1.90769 1.80746 1.23229 1.50000 1.45622 1.06044 1.09686 1.74850 1.21187 0.78487 0.96474 1.02588 1.22341 0.94552 0.96634 0.98892 0.87027 1.22932 0.93117 1.00207 0.98336 1.31697 1.15525 1.14810 1.08475 0.80627 1.07581 0.76739 0.75158 0.79900 1.30107 1.13613 1.13778 1.22006 1.93549 1.87223 1.31633 1.85171 1.93544 1.45439 1.77592 1.82559 1.22724 0.97089 1.04724 0.90649 1.18743 0.93109 0.92406 1.11930 1.24953 1.04696 1.01775 0.87261 1.86558 1.76331 1.42860 1.30890 0.94195 0.76608 0.73631 0.87437 1.20893 0.92121 0.98775 0.94218 1.21380 1.01644 0.91184 1.11502 0.86420 0.91696 0.91022 0.82482 0.85475 0.86528 0.74007 0.91945 0.90895 0.87211 0.87024 0.82784 0.83331 0.85205 0.88442 0.88824 0.91334 0.76300 1.20904 1.21824 0.83231 0.82500 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.10 9.81 113.37 1.11 1.01 16 2 O -0.33 -0.26 10.49 -92.36 -0.97 -1.23 16 3 C 0.16 0.37 6.68 22.49 0.15 0.52 16 4 C -0.25 -0.57 8.97 22.46 0.20 -0.37 16 5 C 0.18 1.06 6.66 22.49 0.15 1.21 16 6 O -0.30 -2.22 8.99 -73.36 -0.66 -2.88 16 7 C 0.03 -0.07 5.22 71.23 0.37 0.31 16 8 C 0.52 0.95 7.91 87.66 0.69 1.64 16 9 O -0.57 -7.50 16.50 15.99 0.26 -7.24 16 10 N -0.71 4.49 5.56 -463.06 -2.57 1.92 16 11 C 0.14 -0.73 5.35 86.38 0.46 -0.27 16 12 C -0.10 0.97 3.94 -10.27 -0.04 0.93 16 13 H 0.11 -1.29 8.14 -2.39 -0.02 -1.31 16 14 C -0.11 1.17 7.16 31.12 0.22 1.39 16 15 C -0.59 4.97 3.82 31.13 0.12 5.09 16 16 H 0.18 -2.26 7.72 -2.38 -0.02 -2.28 16 17 S 2.42 -5.68 5.34 -56.49 -0.30 -5.98 16 18 C -0.64 6.18 10.62 113.37 1.20 7.38 16 19 O -0.98 -4.89 17.19 -127.37 -2.19 -7.07 16 20 O -0.99 -7.85 18.10 -127.37 -2.30 -10.16 16 21 C -0.11 0.69 7.26 31.12 0.23 0.91 16 22 C -0.16 -1.00 5.31 -19.75 -0.10 -1.10 16 23 C -0.08 -0.46 2.36 71.24 0.17 -0.29 16 24 O -0.56 -5.25 12.86 -148.98 -1.92 -7.17 16 25 Si 0.78 0.46 30.18 68.60 2.07 2.53 16 26 C -0.04 -0.10 8.65 22.24 0.19 0.09 16 27 C -0.24 -0.12 9.04 22.38 0.20 0.08 16 28 H 0.12 -1.11 8.14 -2.39 -0.02 -1.12 16 29 H 0.06 -0.47 7.66 -2.39 -0.02 -0.49 16 30 H 0.07 -0.60 7.66 -2.39 -0.02 -0.62 16 31 H 0.16 -0.48 6.30 -2.91 -0.02 -0.50 16 32 H 0.13 -1.11 7.66 -2.39 -0.02 -1.13 16 33 H 0.12 -0.77 7.66 -2.38 -0.02 -0.78 16 34 H 0.42 -5.75 8.47 -92.71 -0.79 -6.53 16 35 H 0.06 -0.10 8.14 -2.39 -0.02 -0.12 16 36 H 0.07 -0.33 7.39 -2.38 -0.02 -0.35 16 37 H 0.11 -1.59 8.10 -2.39 -0.02 -1.61 16 38 H 0.11 -1.14 7.36 -2.39 -0.02 -1.16 16 39 H 0.15 -2.21 8.14 -2.39 -0.02 -2.23 16 40 H 0.15 -1.96 8.14 -2.39 -0.02 -1.98 16 41 H 0.13 -1.13 8.14 -2.39 -0.02 -1.15 16 42 H 0.10 -0.51 8.10 -2.39 -0.02 -0.53 16 43 H 0.09 -0.56 8.10 -2.39 -0.02 -0.58 16 44 H 0.07 0.42 7.82 -2.39 -0.02 0.40 16 45 H 0.39 0.82 8.74 -74.06 -0.65 0.17 16 46 H -0.28 -1.35 6.75 99.48 0.67 -0.68 16 47 H -0.29 -1.52 7.11 99.48 0.71 -0.82 16 48 H 0.15 -0.17 4.89 -2.91 -0.01 -0.18 16 49 H 0.16 -0.76 6.29 -2.91 -0.02 -0.78 16 Total: 0.00 -41.42 416.61 -3.67 -45.09 By element: Atomic # 1 Polarization: -25.93 SS G_CDS: -0.43 Total: -26.36 kcal Atomic # 6 Polarization: 13.21 SS G_CDS: 5.33 Total: 18.54 kcal Atomic # 7 Polarization: 4.49 SS G_CDS: -2.57 Total: 1.92 kcal Atomic # 8 Polarization: -27.97 SS G_CDS: -7.77 Total: -35.74 kcal Atomic # 14 Polarization: 0.46 SS G_CDS: 2.07 Total: 2.53 kcal Atomic # 16 Polarization: -5.68 SS G_CDS: -0.30 Total: -5.98 kcal Total: -41.42 -3.67 -45.09 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17836384_4974312.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -103.028 kcal (2) G-P(sol) polarization free energy of solvation -41.420 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -144.447 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.673 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -45.092 kcal (6) G-S(sol) free energy of system = (1) + (5) -148.120 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.36 seconds