Wall clock time and date at job start Sun Mar 7 2021 12:26:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 C 1.37637 * 125.67730 * 2 1 4 4 C 1.46674 * 126.22712 * 0.03156 * 3 2 1 5 5 O 1.21702 * 119.99574 * 5.48758 * 4 3 2 6 6 N 1.34769 * 120.00392 * 185.49703 * 4 3 2 7 7 C 1.46501 * 120.00204 * 185.10132 * 6 4 3 8 8 C 1.52999 * 109.47015 * 179.97438 * 7 6 4 9 9 H 1.08997 * 112.85068 * 316.19557 * 8 7 6 10 10 C 1.53780 * 113.61597 * 87.50465 * 8 7 6 11 11 C 1.53782 * 87.08434 * 89.11321 * 10 8 7 12 12 H 1.09000 * 113.60839 * 270.88703 * 11 10 8 13 13 S 1.81401 * 113.69158 * 139.99502 * 11 10 8 14 14 C 1.81402 * 101.92159 * 82.46404 * 13 11 10 15 15 O 1.42094 * 108.57520 * 196.95369 * 13 11 10 16 16 O 1.42100 * 108.57669 * 327.97815 * 13 11 10 17 17 C 1.53784 * 87.07920 * 25.43233 * 11 10 8 18 18 C 1.37885 * 107.54992 * 180.02562 * 3 2 1 19 19 C 1.39883 * 107.09151 * 359.76760 * 18 3 2 20 20 Br 1.89091 * 126.07309 * 180.23666 * 19 18 3 21 21 C 1.35502 * 107.85114 * 0.38541 * 19 18 3 22 22 C 1.50698 * 125.57208 * 179.87946 * 21 19 18 23 23 O 1.42895 * 109.47568 * 149.68773 * 22 21 19 24 24 Si 1.86300 * 109.47179 * 29.68689 * 22 21 19 25 25 H 1.09007 * 109.46757 * 265.37093 * 1 2 3 26 26 H 1.09004 * 109.47380 * 25.36663 * 1 2 3 27 27 H 1.08998 * 109.47323 * 145.37492 * 1 2 3 28 28 H 0.96996 * 119.99751 * 5.09084 * 6 4 3 29 29 H 1.09000 * 109.46868 * 299.99293 * 7 6 4 30 30 H 1.09004 * 109.46907 * 59.99468 * 7 6 4 31 31 H 1.08997 * 113.61617 * 203.66507 * 10 8 7 32 32 H 1.09005 * 113.60882 * 334.56491 * 10 8 7 33 33 H 1.08995 * 109.46943 * 59.99916 * 14 13 11 34 34 H 1.09001 * 109.47119 * 180.02562 * 14 13 11 35 35 H 1.09005 * 109.47187 * 300.00188 * 14 13 11 36 36 H 1.08995 * 113.61261 * 220.01870 * 17 11 10 37 37 H 1.08999 * 113.61075 * 89.11510 * 17 11 10 38 38 H 1.07995 * 126.45188 * 180.02562 * 18 3 2 39 39 H 1.09003 * 109.46914 * 269.68895 * 22 21 19 40 40 H 0.96701 * 114.00309 * 180.02562 * 23 22 21 41 41 H 1.48497 * 110.00085 * 59.99823 * 24 22 21 42 42 H 1.48498 * 110.00317 * 181.32111 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2677 1.1180 0.0000 4 6 1.8121 2.5122 0.0007 5 8 0.6259 2.7647 0.1021 6 7 2.7070 3.5137 -0.1112 7 6 2.2660 4.9062 0.0015 8 6 3.4694 5.8370 -0.1610 9 1 4.3442 5.4986 0.3940 10 6 3.7699 6.2057 -1.6234 11 6 2.8093 7.3924 -1.4393 12 1 1.7717 7.1544 -1.6731 13 16 3.3779 8.9205 -2.2345 14 6 2.8425 8.6721 -3.9498 15 8 2.6521 10.0127 -1.6873 16 8 4.7983 8.9459 -2.2027 17 6 3.1345 7.3213 0.0620 18 6 3.5781 0.6890 -0.0006 19 6 3.5529 -0.7096 0.0045 20 35 5.0608 -1.8504 0.0124 21 6 2.2558 -1.1016 -0.0007 22 6 1.7712 -2.5285 -0.0004 23 8 0.5138 -2.6045 0.6740 24 14 3.0125 -3.6057 0.8769 25 1 -0.3633 -0.0829 1.0244 26 1 -0.3634 0.9286 -0.4403 27 1 -0.3634 -0.8456 -0.5839 28 1 3.6432 3.3125 -0.2662 29 1 1.5336 5.1194 -0.7771 30 1 1.8131 5.0658 0.9800 31 1 4.8043 6.5037 -1.7948 32 1 3.4170 5.4656 -2.3416 33 1 1.7595 8.5523 -3.9786 34 1 3.1289 9.5366 -4.5487 35 1 3.3178 7.7777 -4.3528 36 1 2.2687 7.4818 0.7044 37 1 3.9952 7.9243 0.3514 38 1 4.4582 1.3150 -0.0004 39 1 1.6538 -2.8725 -1.0281 40 1 0.1414 -3.4962 0.7127 41 1 3.1818 -3.1470 2.2791 42 1 2.5618 -5.0205 0.8562 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17836384_5000100.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 12:26:55 Heat of formation + Delta-G solvation = -55.228781 kcal Electronic energy + Delta-G solvation = -27969.151389 eV Core-core repulsion = 23705.570388 eV Total energy + Delta-G solvation = -4263.581001 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 407.028 amu Computer time = 3.02 seconds Orbital eigenvalues (eV) -42.86558 -41.01510 -39.81298 -38.00427 -37.94880 -37.04957 -35.80824 -34.52077 -32.62890 -31.33436 -30.73350 -29.58140 -27.36272 -27.15658 -26.90473 -25.16076 -23.17221 -21.58439 -20.98453 -20.25009 -19.80578 -18.78690 -18.66177 -18.52786 -17.35366 -17.27809 -17.06528 -16.99565 -16.82771 -16.35321 -16.05025 -15.66207 -15.36400 -14.90218 -14.70028 -14.54906 -14.40610 -14.31510 -14.27254 -14.13915 -13.95916 -13.89515 -13.81963 -13.45903 -13.20033 -13.15190 -13.04293 -12.92786 -12.88560 -12.68127 -12.10162 -12.05059 -11.92944 -11.86238 -11.46105 -11.26293 -11.06468 -10.83118 -10.32192 -9.87773 -9.30270 -4.60601 -1.08027 0.17342 0.34734 0.90823 1.25345 1.45963 1.62407 1.64639 2.05031 2.15337 2.21714 2.44230 2.68976 2.84519 3.01919 3.18516 3.24418 3.31998 3.45372 3.54923 3.73352 3.75688 3.81717 3.95525 4.11930 4.12466 4.16802 4.30230 4.31834 4.34514 4.37561 4.48941 4.55667 4.57631 4.59888 4.63321 4.69284 4.71020 4.94747 5.15498 5.24401 5.60871 5.80744 6.20786 6.26662 6.98710 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.074 3.926 2 N -0.378 5.378 3 C -0.042 4.042 4 C 0.593 3.407 5 O -0.540 6.540 6 N -0.717 5.717 7 C 0.138 3.862 8 C -0.115 4.115 9 H 0.099 0.901 10 C -0.112 4.112 11 C -0.610 4.610 12 H 0.153 0.847 13 S 2.423 3.577 14 C -0.655 4.655 15 O -0.938 6.938 16 O -0.935 6.935 17 C -0.096 4.096 18 C -0.101 4.101 19 C -0.185 4.185 20 Br 0.076 6.924 21 C 0.111 3.889 22 C -0.046 4.046 23 O -0.544 6.544 24 Si 0.574 3.426 25 H 0.083 0.917 26 H 0.102 0.898 27 H 0.090 0.910 28 H 0.406 0.594 29 H 0.076 0.924 30 H 0.078 0.922 31 H 0.111 0.889 32 H 0.089 0.911 33 H 0.128 0.872 34 H 0.129 0.871 35 H 0.129 0.871 36 H 0.094 0.906 37 H 0.101 0.899 38 H 0.160 0.840 39 H 0.088 0.912 40 H 0.388 0.612 41 H -0.244 1.244 42 H -0.236 1.236 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.625 -3.139 -3.877 5.246 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.067 4.067 2 N -0.049 5.049 3 C -0.157 4.157 4 C 0.381 3.619 5 O -0.418 6.418 6 N -0.369 5.369 7 C 0.015 3.985 8 C -0.135 4.135 9 H 0.117 0.883 10 C -0.150 4.150 11 C -0.719 4.719 12 H 0.171 0.829 13 S 2.606 3.394 14 C -0.805 4.805 15 O -0.935 6.935 16 O -0.933 6.933 17 C -0.134 4.134 18 C -0.128 4.128 19 C -0.270 4.270 20 Br 0.159 6.841 21 C -0.012 4.012 22 C -0.155 4.155 23 O -0.352 6.352 24 Si 0.471 3.529 25 H 0.102 0.898 26 H 0.121 0.879 27 H 0.109 0.891 28 H 0.241 0.759 29 H 0.094 0.906 30 H 0.096 0.904 31 H 0.129 0.871 32 H 0.107 0.893 33 H 0.147 0.853 34 H 0.148 0.852 35 H 0.147 0.853 36 H 0.112 0.888 37 H 0.120 0.880 38 H 0.178 0.822 39 H 0.106 0.894 40 H 0.237 0.763 41 H -0.167 1.167 42 H -0.159 1.159 Dipole moment (debyes) X Y Z Total from point charges 1.565 -2.475 -2.690 3.976 hybrid contribution -1.725 -0.906 -0.416 1.992 sum -0.160 -3.380 -3.106 4.594 Atomic orbital electron populations 1.22392 0.74260 1.05210 1.04796 1.43791 1.07620 1.03582 1.49951 1.19997 0.89737 0.87898 1.18027 1.16794 0.85550 0.83181 0.76398 1.90835 1.16059 1.84629 1.50288 1.45555 1.11614 1.05671 1.74065 1.21208 0.95655 0.78540 1.03102 1.22462 0.98789 0.94920 0.97334 0.88287 1.22851 0.99091 0.95022 0.98002 1.31789 1.11136 1.19156 1.09816 0.82871 1.07804 0.75998 0.77209 0.78430 1.30240 1.12957 1.12234 1.25023 1.93615 1.74443 1.48800 1.76647 1.93610 1.27252 1.86294 1.86097 1.22581 1.03506 0.96381 0.90978 1.21117 0.95308 0.92431 1.03976 1.20413 0.90131 0.94411 1.22030 1.96295 1.33533 1.56805 1.97458 1.19709 0.88869 0.88020 1.04616 1.24324 0.93947 0.95405 1.01843 1.86477 1.34465 1.34882 1.79388 0.93380 0.93743 0.79437 0.86338 0.89837 0.87909 0.89094 0.75879 0.90587 0.90379 0.87086 0.89257 0.85341 0.85203 0.85251 0.88759 0.88033 0.82242 0.89407 0.76325 1.16705 1.15923 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 50. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 0.08 9.27 59.85 0.55 0.63 16 2 N -0.38 -0.75 3.16 -115.59 -0.37 -1.12 16 3 C -0.04 -0.05 6.88 -81.98 -0.56 -0.61 16 4 C 0.59 0.73 7.77 -12.86 -0.10 0.63 16 5 O -0.54 -2.36 14.65 5.19 0.08 -2.29 16 6 N -0.72 1.61 5.53 -61.62 -0.34 1.27 16 7 C 0.14 -0.38 5.36 -4.04 -0.02 -0.40 16 8 C -0.12 0.50 3.94 -89.81 -0.35 0.14 16 9 H 0.10 -0.51 8.14 -51.93 -0.42 -0.94 16 10 C -0.11 0.53 7.16 -25.92 -0.19 0.34 16 11 C -0.61 2.52 3.82 -25.92 -0.10 2.42 16 12 H 0.15 -0.93 7.72 -51.93 -0.40 -1.33 16 13 S 2.42 -4.15 5.34 -107.50 -0.57 -4.72 16 14 C -0.66 2.82 10.62 101.05 1.07 3.89 16 15 O -0.94 -2.60 18.10 -57.83 -1.05 -3.65 16 16 O -0.94 -1.61 17.20 -57.83 -0.99 -2.60 16 17 C -0.10 0.33 7.26 -25.91 -0.19 0.14 16 18 C -0.10 0.06 10.33 -39.10 -0.40 -0.35 16 19 C -0.18 -0.09 6.16 -39.94 -0.25 -0.34 16 20 Br 0.08 -0.08 28.22 -68.01 -1.92 -2.00 16 21 C 0.11 0.17 6.19 -81.90 -0.51 -0.34 16 22 C -0.05 -0.01 2.89 36.00 0.10 0.10 16 23 O -0.54 -0.06 10.47 -35.23 -0.37 -0.43 16 24 Si 0.57 0.47 27.08 -169.99 -4.60 -4.13 16 25 H 0.08 0.13 8.14 -51.93 -0.42 -0.29 16 26 H 0.10 0.17 6.18 -51.93 -0.32 -0.15 16 27 H 0.09 -0.01 7.11 -51.93 -0.37 -0.38 16 28 H 0.41 -1.94 7.42 -40.82 -0.30 -2.25 16 29 H 0.08 -0.18 7.39 -51.93 -0.38 -0.56 16 30 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 31 H 0.11 -0.51 7.37 -51.93 -0.38 -0.89 16 32 H 0.09 -0.51 8.10 -51.93 -0.42 -0.93 16 33 H 0.13 -0.74 8.14 -51.93 -0.42 -1.16 16 34 H 0.13 -0.53 8.14 -51.92 -0.42 -0.96 16 35 H 0.13 -0.78 8.14 -51.92 -0.42 -1.20 16 36 H 0.09 -0.36 8.10 -51.93 -0.42 -0.78 16 37 H 0.10 -0.35 8.10 -51.93 -0.42 -0.77 16 38 H 0.16 -0.61 7.49 -52.49 -0.39 -1.00 16 39 H 0.09 -0.16 7.96 -51.93 -0.41 -0.57 16 40 H 0.39 -1.41 8.74 45.56 0.40 -1.01 16 41 H -0.24 -1.09 7.11 56.52 0.40 -0.69 16 42 H -0.24 -0.50 7.11 56.52 0.40 -0.10 16 LS Contribution 372.14 15.07 5.61 5.61 Total: 0.00 -13.27 372.14 -11.03 -24.30 By element: Atomic # 1 Polarization: -10.94 SS G_CDS: -5.56 Total: -16.51 kcal Atomic # 6 Polarization: 7.21 SS G_CDS: -0.94 Total: 6.27 kcal Atomic # 7 Polarization: 0.86 SS G_CDS: -0.71 Total: 0.15 kcal Atomic # 8 Polarization: -6.64 SS G_CDS: -2.33 Total: -8.97 kcal Atomic # 14 Polarization: 0.47 SS G_CDS: -4.60 Total: -4.13 kcal Atomic # 16 Polarization: -4.15 SS G_CDS: -0.57 Total: -4.72 kcal Atomic # 35 Polarization: -0.08 SS G_CDS: -1.92 Total: -2.00 kcal Total LS contribution 5.61 Total: 5.61 kcal Total: -13.27 -11.03 -24.30 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17836384_5000100.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -30.933 kcal (2) G-P(sol) polarization free energy of solvation -13.266 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -44.199 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.030 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.296 kcal (6) G-S(sol) free energy of system = (1) + (5) -55.229 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 3.02 seconds