Wall clock time and date at job start Sun Mar 7 2021 10:45:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86297 * 109.46956 * 2 1 4 4 C 1.50694 * 109.46918 * 120.00225 * 2 1 3 5 5 C 1.38615 * 119.84019 * 195.02418 * 4 2 1 6 6 F 1.35094 * 119.91764 * 359.95039 * 5 4 2 7 7 C 1.38116 * 120.16038 * 179.70138 * 5 4 2 8 8 C 1.39613 * 119.85595 * 0.55031 * 7 5 4 9 9 C 1.47697 * 120.15857 * 179.72445 * 8 7 5 10 10 O 1.21569 * 120.00027 * 179.72713 * 9 8 7 11 11 N 1.34780 * 119.99678 * 359.72709 * 9 8 7 12 12 C 1.46493 * 119.99702 * 180.02562 * 11 9 8 13 13 C 1.53003 * 109.47044 * 179.97438 * 12 11 9 14 14 C 1.53001 * 109.47118 * 179.97438 * 13 12 11 15 15 H 1.08998 * 112.84794 * 316.18914 * 14 13 12 16 16 C 1.53778 * 113.69389 * 87.46518 * 14 13 12 17 17 C 1.53778 * 87.08449 * 139.99094 * 16 14 13 18 18 H 1.09000 * 113.61263 * 89.11673 * 17 16 14 19 19 O 1.42902 * 113.61375 * 220.02054 * 17 16 14 20 20 C 1.53784 * 87.08081 * 334.56700 * 17 16 14 21 21 C 1.39850 * 119.68601 * 359.44658 * 8 7 5 22 22 F 1.35104 * 120.08074 * 180.29483 * 21 8 7 23 23 C 1.38232 * 119.84772 * 14.99900 * 4 2 1 24 24 H 0.96701 * 114.00605 * 299.99855 * 1 2 3 25 25 H 1.08998 * 109.46711 * 240.00337 * 2 1 3 26 26 H 1.48497 * 110.00384 * 300.00145 * 3 2 1 27 27 H 1.48500 * 110.00099 * 61.32112 * 3 2 1 28 28 H 1.08003 * 120.06993 * 180.29813 * 7 5 4 29 29 H 0.97000 * 119.99980 * 359.97438 * 11 9 8 30 30 H 1.08997 * 109.47454 * 59.99483 * 12 11 9 31 31 H 1.09003 * 109.47098 * 299.99533 * 12 11 9 32 32 H 1.08997 * 109.47327 * 59.99515 * 13 12 11 33 33 H 1.09003 * 109.46882 * 299.99776 * 13 12 11 34 34 H 1.08999 * 113.61111 * 254.54157 * 16 14 13 35 35 H 1.08999 * 113.61280 * 25.35540 * 16 14 13 36 36 H 0.96700 * 113.99432 * 277.49158 * 19 17 16 37 37 H 1.09004 * 113.61451 * 270.88641 * 20 17 16 38 38 H 1.08994 * 113.61477 * 139.97943 * 20 17 16 39 39 H 1.08010 * 119.92189 * 0.02562 * 23 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 3.2560 -0.5721 1.6142 6 9 4.0922 0.1977 0.8840 7 6 3.7219 -1.2153 2.7442 8 6 2.8581 -2.0156 3.4943 9 6 3.3507 -2.7114 4.7004 10 8 2.5948 -3.4036 5.3542 11 7 4.6383 -2.5789 5.0761 12 6 5.1270 -3.2694 6.2721 13 6 6.6107 -2.9540 6.4726 14 6 7.1210 -3.6746 7.7220 15 1 6.4324 -3.6014 8.5638 16 6 7.6137 -5.1061 7.4518 17 6 8.7606 -4.8125 8.4333 18 1 8.5202 -5.0505 9.4695 19 8 10.0199 -5.3453 8.0179 20 6 8.5747 -3.3266 8.0833 21 6 1.5227 -2.1507 3.1015 22 9 0.6784 -2.9184 3.8248 23 6 1.0687 -1.4965 1.9712 24 1 -0.3934 0.4417 0.7650 25 1 1.7923 -0.5138 -0.8900 26 1 1.5614 2.4679 -1.2084 27 1 1.5879 2.4585 1.2242 28 1 4.7531 -1.1027 3.0446 29 1 5.2414 -2.0269 4.5542 30 1 4.9979 -4.3447 6.1491 31 1 4.5629 -2.9329 7.1420 32 1 6.7402 -1.8787 6.5954 33 1 7.1745 -3.2908 5.6026 34 1 6.9270 -5.8773 7.8008 35 1 7.9454 -5.2674 6.4262 36 1 10.1426 -6.2795 8.2353 37 1 9.1706 -3.0010 7.2306 38 1 8.6639 -2.6613 8.9421 39 1 0.0377 -1.5999 1.6664 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17837616_12360598.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:45:49 Heat of formation + Delta-G solvation = -154.801741 kcal Electronic energy + Delta-G solvation = -25510.891301 eV Core-core repulsion = 21249.933639 eV Total energy + Delta-G solvation = -4260.957662 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 314.116 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -50.30493 -50.12396 -41.35973 -40.39278 -39.90046 -37.79989 -36.86002 -35.69746 -33.39912 -31.53117 -31.29722 -28.04183 -26.68295 -25.71964 -24.21511 -23.60383 -22.60017 -21.86011 -20.43814 -19.62912 -19.05620 -18.56387 -18.36542 -17.93188 -17.39800 -17.27276 -16.80949 -16.76943 -16.49221 -16.19802 -15.99735 -15.71633 -15.69109 -15.36225 -15.27186 -15.07331 -14.51492 -14.15818 -14.10795 -13.83864 -13.37612 -13.33904 -13.24571 -12.99457 -12.67947 -12.65570 -12.45989 -12.08291 -11.95659 -11.66460 -11.31737 -11.15118 -11.09862 -10.65279 -10.34851 -10.17692 -9.75212 -4.80455 -0.78862 -0.28253 1.09784 1.46135 1.56398 1.86657 1.90890 2.28338 2.75957 2.82757 3.10377 3.15849 3.32504 3.44132 3.51658 3.56038 3.65507 3.80860 3.82703 4.02253 4.10814 4.21981 4.28027 4.35509 4.39755 4.42493 4.61497 4.63485 4.71253 4.73993 4.75690 4.83981 4.86982 4.97435 5.03001 5.13910 5.27674 5.29813 5.40296 5.51863 6.32152 6.34464 6.88419 6.99831 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.081 4.081 3 Si 0.749 3.251 4 C -0.089 4.089 5 C 0.086 3.914 6 F -0.090 7.090 7 C -0.066 4.066 8 C -0.159 4.159 9 C 0.555 3.445 10 O -0.568 6.568 11 N -0.706 5.706 12 C 0.121 3.879 13 C -0.109 4.109 14 C -0.101 4.101 15 H 0.101 0.899 16 C -0.166 4.166 17 C 0.065 3.935 18 H 0.091 0.909 19 O -0.583 6.583 20 C -0.126 4.126 21 C 0.134 3.866 22 F -0.130 7.130 23 C -0.127 4.127 24 H 0.390 0.610 25 H 0.148 0.852 26 H -0.289 1.289 27 H -0.283 1.283 28 H 0.190 0.810 29 H 0.418 0.582 30 H 0.059 0.941 31 H 0.063 0.937 32 H 0.089 0.911 33 H 0.081 0.919 34 H 0.070 0.930 35 H 0.085 0.915 36 H 0.393 0.607 37 H 0.086 0.914 38 H 0.079 0.921 39 H 0.166 0.834 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.783 2.386 -0.513 6.277 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.350 6.350 2 C -0.189 4.189 3 Si 0.652 3.348 4 C -0.091 4.091 5 C 0.067 3.933 6 F -0.069 7.069 7 C -0.085 4.085 8 C -0.163 4.163 9 C 0.342 3.658 10 O -0.448 6.448 11 N -0.359 5.359 12 C -0.002 4.002 13 C -0.147 4.147 14 C -0.120 4.120 15 H 0.119 0.881 16 C -0.203 4.203 17 C 0.007 3.993 18 H 0.108 0.892 19 O -0.392 6.392 20 C -0.164 4.164 21 C 0.114 3.886 22 F -0.108 7.108 23 C -0.146 4.146 24 H 0.241 0.759 25 H 0.165 0.835 26 H -0.216 1.216 27 H -0.209 1.209 28 H 0.207 0.793 29 H 0.256 0.744 30 H 0.077 0.923 31 H 0.081 0.919 32 H 0.107 0.893 33 H 0.099 0.901 34 H 0.089 0.911 35 H 0.103 0.897 36 H 0.242 0.758 37 H 0.104 0.896 38 H 0.097 0.903 39 H 0.183 0.817 Dipole moment (debyes) X Y Z Total from point charges 5.238 3.004 -0.773 6.087 hybrid contribution -1.305 -0.816 0.652 1.671 sum 3.933 2.188 -0.121 4.502 Atomic orbital electron populations 1.86593 1.17454 1.80408 1.50557 1.25196 0.84381 1.11505 0.97823 0.93925 0.91641 0.71477 0.77790 1.20517 0.92703 0.97646 0.98230 1.17072 0.87377 0.96204 0.92685 1.91238 1.69130 1.70983 1.75520 1.21364 1.01736 0.93408 0.91981 1.19822 0.93403 1.04194 0.98912 1.18126 0.82867 0.80756 0.84075 1.90867 1.56933 1.41179 1.55828 1.45765 1.09768 1.50898 1.29464 1.21430 0.95355 0.96864 0.86599 1.21685 0.92605 1.02144 0.98239 1.22212 0.95895 0.95421 0.98480 0.88105 1.23756 0.98250 0.97498 1.00824 1.23512 0.82861 0.95598 0.97354 0.89172 1.86484 1.37197 1.31717 1.83754 1.23130 0.95822 0.94967 1.02443 1.17980 0.87197 0.92208 0.91245 1.91585 1.70005 1.72647 1.76596 1.20859 1.02938 0.97463 0.93310 0.75947 0.83520 1.21594 1.20900 0.79293 0.74355 0.92283 0.91911 0.89273 0.90055 0.91084 0.89685 0.75768 0.89584 0.90280 0.81660 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.75 11.63 -148.98 -1.73 -0.99 16 2 C -0.08 0.32 2.96 71.23 0.21 0.53 16 3 Si 0.75 -2.36 29.56 68.60 2.03 -0.34 16 4 C -0.09 0.31 5.14 -19.78 -0.10 0.21 16 5 C 0.09 -0.50 6.65 22.33 0.15 -0.36 16 6 F -0.09 0.74 13.69 44.97 0.62 1.35 16 7 C -0.07 0.44 9.52 22.57 0.21 0.66 16 8 C -0.16 -0.12 5.88 -20.06 -0.12 -0.24 16 9 C 0.55 2.55 7.77 86.74 0.67 3.23 16 10 O -0.57 -8.35 15.34 -3.93 -0.06 -8.41 16 11 N -0.71 2.39 5.51 -466.12 -2.57 -0.18 16 12 C 0.12 -0.34 5.66 86.38 0.49 0.15 16 13 C -0.11 0.82 5.17 30.60 0.16 0.98 16 14 C -0.10 0.56 3.65 -10.27 -0.04 0.52 16 15 H 0.10 -0.60 8.13 -2.39 -0.02 -0.62 16 16 C -0.17 0.59 7.47 31.12 0.23 0.83 16 17 C 0.07 -0.15 5.21 31.12 0.16 0.01 16 18 H 0.09 -0.40 8.14 -2.39 -0.02 -0.42 16 19 O -0.58 -0.50 13.67 -148.98 -2.04 -2.53 16 20 C -0.13 0.44 7.47 31.12 0.23 0.67 16 21 C 0.13 0.55 7.28 22.67 0.17 0.72 16 22 F -0.13 -1.43 15.55 44.97 0.70 -0.73 16 23 C -0.13 0.08 9.20 22.27 0.20 0.28 16 24 H 0.39 -2.75 8.42 -74.06 -0.62 -3.38 16 25 H 0.15 -0.92 7.96 -2.39 -0.02 -0.94 16 26 H -0.29 -1.13 7.11 99.48 0.71 -0.42 16 27 H -0.28 -0.46 7.11 99.48 0.71 0.25 16 28 H 0.19 -2.78 6.40 -2.91 -0.02 -2.80 16 29 H 0.42 -4.57 6.50 -92.71 -0.60 -5.18 16 30 H 0.06 0.03 8.14 -2.39 -0.02 0.01 16 31 H 0.06 -0.02 8.14 -2.39 -0.02 -0.04 16 32 H 0.09 -0.87 8.14 -2.39 -0.02 -0.89 16 33 H 0.08 -0.68 7.85 -2.39 -0.02 -0.70 16 34 H 0.07 -0.26 8.14 -2.39 -0.02 -0.28 16 35 H 0.08 -0.20 7.90 -2.39 -0.02 -0.22 16 36 H 0.39 -2.65 9.12 -74.06 -0.68 -3.32 16 37 H 0.09 -0.19 8.10 -2.39 -0.02 -0.21 16 38 H 0.08 -0.34 8.14 -2.39 -0.02 -0.36 16 39 H 0.17 -0.37 7.06 -2.91 -0.02 -0.39 16 Total: 0.00 -22.38 334.49 -1.16 -23.54 By element: Atomic # 1 Polarization: -19.17 SS G_CDS: -0.74 Total: -19.90 kcal Atomic # 6 Polarization: 5.56 SS G_CDS: 2.64 Total: 8.19 kcal Atomic # 7 Polarization: 2.39 SS G_CDS: -2.57 Total: -0.18 kcal Atomic # 8 Polarization: -8.10 SS G_CDS: -3.83 Total: -11.93 kcal Atomic # 9 Polarization: -0.70 SS G_CDS: 1.31 Total: 0.62 kcal Atomic # 14 Polarization: -2.36 SS G_CDS: 2.03 Total: -0.34 kcal Total: -22.38 -1.16 -23.54 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17837616_12360598.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -131.265 kcal (2) G-P(sol) polarization free energy of solvation -22.380 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -153.645 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.157 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.537 kcal (6) G-S(sol) free energy of system = (1) + (5) -154.802 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds