Wall clock time and date at job start Sun Mar 7 2021 10:47:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86298 * 109.47313 * 2 1 4 4 C 1.50700 * 109.47075 * 120.00196 * 2 1 3 5 5 C 1.38245 * 119.96954 * 245.02175 * 4 2 1 6 6 C 1.38287 * 120.11362 * 179.97438 * 5 4 2 7 7 C 1.38124 * 120.05266 * 359.67940 * 6 5 4 8 8 C 1.38750 * 119.94521 * 0.59747 * 7 6 5 9 9 O 1.35901 * 120.05719 * 179.70272 * 8 7 6 10 10 C 1.42895 * 117.00296 * 359.72061 * 9 8 7 11 11 C 1.52992 * 109.47606 * 180.02562 * 10 9 8 12 12 C 1.52997 * 109.47482 * 180.02562 * 11 10 9 13 13 C 1.50701 * 109.47212 * 179.97438 * 12 11 10 14 14 O 1.21280 * 119.99781 * 0.02562 * 13 12 11 15 15 N 1.34780 * 119.99795 * 179.97438 * 13 12 11 16 16 C 1.46497 * 119.99566 * 180.02562 * 15 13 12 17 17 C 1.52997 * 109.46983 * 180.02562 * 16 15 13 18 18 C 1.53005 * 109.47452 * 179.97438 * 17 16 15 19 19 H 1.08996 * 112.84666 * 316.19895 * 18 17 16 20 20 C 1.53784 * 113.60962 * 87.50268 * 18 17 16 21 21 C 1.53786 * 87.07926 * 139.98457 * 20 18 17 22 22 H 1.09001 * 113.61303 * 89.10992 * 21 20 18 23 23 O 1.42898 * 113.61180 * 220.01884 * 21 20 18 24 24 C 1.53783 * 113.61421 * 184.99776 * 18 17 16 25 25 C 1.38160 * 119.97540 * 64.99665 * 4 2 1 26 26 H 0.96699 * 114.00126 * 60.00012 * 1 2 3 27 27 H 1.09000 * 109.47111 * 239.99533 * 2 1 3 28 28 H 1.48493 * 110.00210 * 59.99801 * 3 2 1 29 29 H 1.48498 * 110.00014 * 181.32338 * 3 2 1 30 30 H 1.08006 * 119.94729 * 359.97340 * 5 4 2 31 31 H 1.08001 * 119.97257 * 179.97438 * 6 5 4 32 32 H 1.08006 * 120.02973 * 180.32004 * 7 6 5 33 33 H 1.09002 * 109.47063 * 60.00108 * 10 9 8 34 34 H 1.09001 * 109.46798 * 300.00375 * 10 9 8 35 35 H 1.09002 * 109.47103 * 59.99788 * 11 10 9 36 36 H 1.08998 * 109.46862 * 300.00600 * 11 10 9 37 37 H 1.09002 * 109.47153 * 59.99783 * 12 11 10 38 38 H 1.09001 * 109.46832 * 299.99974 * 12 11 10 39 39 H 0.96995 * 120.00011 * 0.02562 * 15 13 12 40 40 H 1.09001 * 109.47487 * 300.00114 * 16 15 13 41 41 H 1.09002 * 109.47182 * 60.00342 * 16 15 13 42 42 H 1.09001 * 109.47289 * 299.99909 * 17 16 15 43 43 H 1.09002 * 109.47153 * 59.99993 * 17 16 15 44 44 H 1.09002 * 113.61021 * 254.52688 * 20 18 17 45 45 H 1.08997 * 113.61644 * 25.43573 * 20 18 17 46 46 H 0.96701 * 113.99810 * 277.49434 * 23 21 20 47 47 H 1.08993 * 113.61720 * 334.56630 * 24 18 17 48 48 H 1.09000 * 113.61062 * 105.39291 * 24 18 17 49 49 H 1.07998 * 120.02625 * 0.04541 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 2.6383 -0.0116 2.1911 6 6 3.1002 -0.6604 3.3216 7 6 2.8503 -2.0076 3.4967 8 6 2.1460 -2.7125 2.5312 9 8 1.9040 -4.0393 2.6983 10 6 2.4094 -4.6461 3.8893 11 6 2.0423 -6.1312 3.9005 12 6 2.5829 -6.7807 5.1760 13 6 2.2206 -8.2435 5.1873 14 8 1.5924 -8.7197 4.2657 15 7 2.5957 -9.0226 6.2211 16 6 2.2441 -10.4447 6.2318 17 6 2.7846 -11.0941 7.5073 18 6 2.4168 -12.5792 7.5189 19 1 1.3874 -12.7627 7.2110 20 6 3.4440 -13.4737 6.8050 21 6 3.2300 -14.4900 7.9393 22 1 2.4233 -15.1969 7.7456 23 8 4.4342 -15.1251 8.3734 24 6 2.8090 -13.3009 8.8190 25 6 1.6845 -2.0595 1.3977 26 1 -0.3933 0.4417 -0.7650 27 1 1.7923 -0.5139 -0.8899 28 1 1.5616 2.4679 1.2084 29 1 3.5346 1.7702 -0.0322 30 1 2.8303 1.0430 2.0586 31 1 3.6526 -0.1124 4.0705 32 1 3.2067 -2.5128 4.3822 33 1 1.9725 -4.1568 4.7598 34 1 3.4939 -4.5400 3.9190 35 1 2.4795 -6.6202 3.0299 36 1 0.9579 -6.2376 3.8705 37 1 2.1453 -6.2916 6.0463 38 1 3.6672 -6.6742 5.2063 39 1 3.0985 -8.6417 6.9580 40 1 1.1597 -10.5511 6.2017 41 1 2.6814 -10.9337 5.3613 42 1 3.8689 -10.9878 7.5378 43 1 2.3469 -10.6050 8.3776 44 1 3.1100 -13.8303 5.8306 45 1 4.4486 -13.0515 6.7809 46 1 4.7041 -15.8737 7.8241 47 1 3.6400 -12.8315 9.3453 48 1 1.9626 -13.5166 9.4710 49 1 1.1324 -2.6051 0.6468 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17837616_4549616.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:47:29 Heat of formation + Delta-G solvation = -116.519766 kcal Electronic energy + Delta-G solvation = -27035.168773 eV Core-core repulsion = 22929.484044 eV Total energy + Delta-G solvation = -4105.684729 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.182 amu Computer time = 0.97 seconds Orbital eigenvalues (eV) -41.26798 -40.87864 -40.33956 -39.08031 -37.32177 -36.87942 -35.62941 -34.91572 -32.57119 -31.88823 -31.12279 -28.47142 -26.85518 -26.77966 -25.55094 -23.70020 -23.34699 -22.66507 -21.75534 -21.37064 -20.54521 -18.90575 -18.53345 -18.39857 -18.05834 -17.54018 -17.39265 -17.03990 -16.92507 -16.73946 -16.31993 -15.82438 -15.75264 -15.45529 -15.32233 -14.82593 -14.67875 -14.53282 -14.25348 -14.11399 -13.94608 -13.53166 -13.49723 -13.40743 -13.31188 -13.22924 -12.76875 -12.58632 -12.56327 -12.41752 -12.18907 -12.09147 -12.02829 -11.78472 -11.70750 -11.65001 -11.30822 -10.92636 -10.72974 -10.35896 -10.12916 -9.87766 -9.21223 -4.96078 0.22753 0.42610 1.27290 1.62643 1.65378 1.88507 1.98752 2.33183 2.66143 3.16213 3.38027 3.40174 3.49115 3.55089 3.67174 3.76118 3.78053 3.83692 3.86259 3.89519 3.97198 3.99410 4.10161 4.16087 4.19818 4.22688 4.24875 4.27450 4.30635 4.41824 4.45902 4.53065 4.58919 4.65719 4.71246 4.72898 4.83617 4.90270 4.95858 4.98965 5.00552 5.13421 5.14579 5.27686 5.34447 5.36754 5.37802 5.46449 5.69744 6.40921 6.43115 6.63307 6.65295 7.19005 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.074 4.074 3 Si 0.688 3.312 4 C -0.036 4.036 5 C -0.163 4.163 6 C -0.072 4.072 7 C -0.205 4.205 8 C 0.134 3.866 9 O -0.310 6.310 10 C 0.059 3.941 11 C -0.105 4.105 12 C -0.138 4.138 13 C 0.513 3.487 14 O -0.535 6.535 15 N -0.734 5.734 16 C 0.119 3.881 17 C -0.119 4.119 18 C -0.107 4.107 19 H 0.097 0.903 20 C -0.167 4.167 21 C 0.074 3.926 22 H 0.082 0.918 23 O -0.561 6.561 24 C -0.125 4.125 25 C -0.123 4.123 26 H 0.383 0.617 27 H 0.076 0.924 28 H -0.250 1.250 29 H -0.255 1.255 30 H 0.120 0.880 31 H 0.130 0.870 32 H 0.131 0.869 33 H 0.064 0.936 34 H 0.064 0.936 35 H 0.084 0.916 36 H 0.084 0.916 37 H 0.098 0.902 38 H 0.098 0.902 39 H 0.401 0.599 40 H 0.068 0.932 41 H 0.069 0.931 42 H 0.072 0.928 43 H 0.073 0.927 44 H 0.070 0.930 45 H 0.090 0.910 46 H 0.379 0.621 47 H 0.091 0.909 48 H 0.075 0.925 49 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.955 0.921 1.106 2.428 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.350 6.350 2 C -0.184 4.184 3 Si 0.589 3.411 4 C -0.036 4.036 5 C -0.181 4.181 6 C -0.090 4.090 7 C -0.224 4.224 8 C 0.089 3.911 9 O -0.224 6.224 10 C -0.016 4.016 11 C -0.143 4.143 12 C -0.178 4.178 13 C 0.299 3.701 14 O -0.411 6.411 15 N -0.386 5.386 16 C -0.005 4.005 17 C -0.157 4.157 18 C -0.126 4.126 19 H 0.115 0.885 20 C -0.204 4.204 21 C 0.015 3.985 22 H 0.100 0.900 23 O -0.367 6.367 24 C -0.162 4.162 25 C -0.141 4.141 26 H 0.231 0.769 27 H 0.094 0.906 28 H -0.175 1.175 29 H -0.180 1.180 30 H 0.137 0.863 31 H 0.148 0.852 32 H 0.149 0.851 33 H 0.083 0.917 34 H 0.082 0.918 35 H 0.102 0.898 36 H 0.102 0.898 37 H 0.116 0.884 38 H 0.116 0.884 39 H 0.235 0.765 40 H 0.087 0.913 41 H 0.087 0.913 42 H 0.091 0.909 43 H 0.092 0.908 44 H 0.089 0.911 45 H 0.109 0.891 46 H 0.227 0.773 47 H 0.110 0.890 48 H 0.093 0.907 49 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 1.931 1.159 1.755 2.855 hybrid contribution 0.486 -0.794 0.403 1.014 sum 2.417 0.365 2.158 3.260 Atomic orbital electron populations 1.86505 1.17011 1.81855 1.49674 1.24736 0.85897 1.10527 0.97281 0.95351 0.80695 0.77869 0.87203 1.19117 0.96824 0.93008 0.94656 1.20802 1.02654 0.99149 0.95463 1.20857 0.97640 0.93818 0.96716 1.21296 1.04797 0.95772 1.00511 1.18992 0.94755 0.83000 0.94369 1.86082 1.74215 1.19795 1.42271 1.22836 0.98739 0.93831 0.86213 1.21228 1.03557 0.91736 0.97779 1.21529 1.03469 0.92515 1.00280 1.20572 0.79074 0.88595 0.81846 1.90755 1.39356 1.75472 1.35500 1.46036 1.58509 1.10322 1.23766 1.21382 1.00604 0.80004 0.98502 1.21745 1.01645 0.94972 0.97300 1.22247 0.99804 0.93261 0.97305 0.88482 1.23794 1.00155 0.97887 0.98609 1.23347 0.87288 0.92604 0.95302 0.89993 1.86528 1.42406 1.50302 1.57451 1.23121 1.01547 0.95080 0.96461 1.20255 1.02776 0.93606 0.97479 0.76948 0.90571 1.17522 1.17959 0.86291 0.85240 0.85074 0.91739 0.91757 0.89776 0.89758 0.88361 0.88373 0.76455 0.91338 0.91300 0.90906 0.90827 0.91090 0.89135 0.77334 0.89049 0.90652 0.84623 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.59 12.81 -35.23 -0.45 -1.05 16 2 C -0.07 -0.06 2.79 36.01 0.10 0.04 16 3 Si 0.69 -0.40 29.85 -169.99 -5.07 -5.47 16 4 C -0.04 -0.12 5.38 -104.65 -0.56 -0.69 16 5 C -0.16 -0.51 8.67 -39.56 -0.34 -0.85 16 6 C -0.07 -0.14 10.04 -39.61 -0.40 -0.54 16 7 C -0.21 -0.40 9.04 -39.43 -0.36 -0.75 16 8 C 0.13 0.47 6.69 -39.22 -0.26 0.21 16 9 O -0.31 -1.03 10.14 -19.43 -0.20 -1.23 16 10 C 0.06 -0.01 4.74 37.15 0.18 0.17 16 11 C -0.11 -0.02 4.87 -26.74 -0.13 -0.15 16 12 C -0.14 0.30 5.70 -27.88 -0.16 0.14 16 13 C 0.51 0.52 7.83 -10.98 -0.09 0.44 16 14 O -0.53 -3.05 15.98 5.56 0.09 -2.97 16 15 N -0.73 1.01 5.56 -60.30 -0.33 0.68 16 16 C 0.12 -0.10 5.66 -4.04 -0.02 -0.12 16 17 C -0.12 0.31 5.16 -26.73 -0.14 0.17 16 18 C -0.11 0.21 3.65 -89.80 -0.33 -0.12 16 19 H 0.10 -0.21 8.13 -51.93 -0.42 -0.64 16 20 C -0.17 0.22 7.46 -25.91 -0.19 0.03 16 21 C 0.07 -0.05 5.21 -25.91 -0.14 -0.19 16 22 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 23 O -0.56 -0.40 13.67 -35.23 -0.48 -0.89 16 24 C -0.12 0.13 7.47 -25.92 -0.19 -0.07 16 25 C -0.12 -0.48 9.62 -39.43 -0.38 -0.86 16 26 H 0.38 -1.60 8.74 45.56 0.40 -1.20 16 27 H 0.08 -0.06 7.96 -51.93 -0.41 -0.48 16 28 H -0.25 -0.63 7.05 56.52 0.40 -0.23 16 29 H -0.25 -0.46 7.11 56.52 0.40 -0.06 16 30 H 0.12 0.28 4.86 -52.48 -0.26 0.03 16 31 H 0.13 -0.06 8.06 -52.49 -0.42 -0.48 16 32 H 0.13 -0.08 6.30 -52.48 -0.33 -0.41 16 33 H 0.06 -0.09 7.65 -51.93 -0.40 -0.49 16 34 H 0.06 -0.10 7.67 -51.93 -0.40 -0.50 16 35 H 0.08 0.14 8.10 -51.93 -0.42 -0.28 16 36 H 0.08 0.15 8.10 -51.93 -0.42 -0.27 16 37 H 0.10 -0.41 8.14 -51.93 -0.42 -0.83 16 38 H 0.10 -0.41 8.14 -51.93 -0.42 -0.83 16 39 H 0.40 -1.71 8.47 -40.82 -0.35 -2.06 16 40 H 0.07 0.02 8.14 -51.93 -0.42 -0.41 16 41 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 42 H 0.07 -0.19 7.84 -51.93 -0.41 -0.60 16 43 H 0.07 -0.23 8.14 -51.93 -0.42 -0.65 16 44 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 45 H 0.09 -0.06 7.90 -51.93 -0.41 -0.47 16 46 H 0.38 -1.21 9.12 45.56 0.42 -0.80 16 47 H 0.09 -0.03 8.10 -51.93 -0.42 -0.45 16 48 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 49 H 0.14 0.47 8.06 -52.49 -0.42 0.05 16 LS Contribution 402.36 15.07 6.06 6.06 Total: 0.00 -11.02 402.36 -11.05 -22.07 By element: Atomic # 1 Polarization: -6.81 SS G_CDS: -7.26 Total: -14.07 kcal Atomic # 6 Polarization: 0.27 SS G_CDS: -3.41 Total: -3.14 kcal Atomic # 7 Polarization: 1.01 SS G_CDS: -0.33 Total: 0.68 kcal Atomic # 8 Polarization: -5.09 SS G_CDS: -1.04 Total: -6.13 kcal Atomic # 14 Polarization: -0.40 SS G_CDS: -5.07 Total: -5.47 kcal Total LS contribution 6.06 Total: 6.06 kcal Total: -11.02 -11.05 -22.07 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17837616_4549616.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -94.446 kcal (2) G-P(sol) polarization free energy of solvation -11.019 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -105.465 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.055 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.073 kcal (6) G-S(sol) free energy of system = (1) + (5) -116.520 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.98 seconds