Wall clock time and date at job start Sun Mar 7 2021 10:47:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86298 * 109.47313 * 2 1 4 4 C 1.50700 * 109.47075 * 120.00196 * 2 1 3 5 5 C 1.38245 * 119.96954 * 245.02175 * 4 2 1 6 6 C 1.38287 * 120.11362 * 179.97438 * 5 4 2 7 7 C 1.38124 * 120.05266 * 359.67940 * 6 5 4 8 8 C 1.38750 * 119.94521 * 0.59747 * 7 6 5 9 9 O 1.35901 * 120.05719 * 179.70272 * 8 7 6 10 10 C 1.42895 * 117.00296 * 359.72061 * 9 8 7 11 11 C 1.52992 * 109.47606 * 180.02562 * 10 9 8 12 12 C 1.52997 * 109.47482 * 180.02562 * 11 10 9 13 13 C 1.50701 * 109.47212 * 179.97438 * 12 11 10 14 14 O 1.21280 * 119.99781 * 0.02562 * 13 12 11 15 15 N 1.34780 * 119.99795 * 179.97438 * 13 12 11 16 16 C 1.46497 * 119.99566 * 180.02562 * 15 13 12 17 17 C 1.52997 * 109.46983 * 180.02562 * 16 15 13 18 18 C 1.53005 * 109.47452 * 179.97438 * 17 16 15 19 19 H 1.08996 * 112.84666 * 316.19895 * 18 17 16 20 20 C 1.53784 * 113.60962 * 87.50268 * 18 17 16 21 21 C 1.53786 * 87.07926 * 139.98457 * 20 18 17 22 22 H 1.09001 * 113.61303 * 89.10992 * 21 20 18 23 23 O 1.42898 * 113.61180 * 220.01884 * 21 20 18 24 24 C 1.53783 * 113.61421 * 184.99776 * 18 17 16 25 25 C 1.38160 * 119.97540 * 64.99665 * 4 2 1 26 26 H 0.96699 * 114.00126 * 60.00012 * 1 2 3 27 27 H 1.09000 * 109.47111 * 239.99533 * 2 1 3 28 28 H 1.48493 * 110.00210 * 59.99801 * 3 2 1 29 29 H 1.48498 * 110.00014 * 181.32338 * 3 2 1 30 30 H 1.08006 * 119.94729 * 359.97340 * 5 4 2 31 31 H 1.08001 * 119.97257 * 179.97438 * 6 5 4 32 32 H 1.08006 * 120.02973 * 180.32004 * 7 6 5 33 33 H 1.09002 * 109.47063 * 60.00108 * 10 9 8 34 34 H 1.09001 * 109.46798 * 300.00375 * 10 9 8 35 35 H 1.09002 * 109.47103 * 59.99788 * 11 10 9 36 36 H 1.08998 * 109.46862 * 300.00600 * 11 10 9 37 37 H 1.09002 * 109.47153 * 59.99783 * 12 11 10 38 38 H 1.09001 * 109.46832 * 299.99974 * 12 11 10 39 39 H 0.96995 * 120.00011 * 0.02562 * 15 13 12 40 40 H 1.09001 * 109.47487 * 300.00114 * 16 15 13 41 41 H 1.09002 * 109.47182 * 60.00342 * 16 15 13 42 42 H 1.09001 * 109.47289 * 299.99909 * 17 16 15 43 43 H 1.09002 * 109.47153 * 59.99993 * 17 16 15 44 44 H 1.09002 * 113.61021 * 254.52688 * 20 18 17 45 45 H 1.08997 * 113.61644 * 25.43573 * 20 18 17 46 46 H 0.96701 * 113.99810 * 277.49434 * 23 21 20 47 47 H 1.08993 * 113.61720 * 334.56630 * 24 18 17 48 48 H 1.09000 * 113.61062 * 105.39291 * 24 18 17 49 49 H 1.07998 * 120.02625 * 0.04541 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 2.6383 -0.0116 2.1911 6 6 3.1002 -0.6604 3.3216 7 6 2.8503 -2.0076 3.4967 8 6 2.1460 -2.7125 2.5312 9 8 1.9040 -4.0393 2.6983 10 6 2.4094 -4.6461 3.8893 11 6 2.0423 -6.1312 3.9005 12 6 2.5829 -6.7807 5.1760 13 6 2.2206 -8.2435 5.1873 14 8 1.5924 -8.7197 4.2657 15 7 2.5957 -9.0226 6.2211 16 6 2.2441 -10.4447 6.2318 17 6 2.7846 -11.0941 7.5073 18 6 2.4168 -12.5792 7.5189 19 1 1.3874 -12.7627 7.2110 20 6 3.4440 -13.4737 6.8050 21 6 3.2300 -14.4900 7.9393 22 1 2.4233 -15.1969 7.7456 23 8 4.4342 -15.1251 8.3734 24 6 2.8090 -13.3009 8.8190 25 6 1.6845 -2.0595 1.3977 26 1 -0.3933 0.4417 -0.7650 27 1 1.7923 -0.5139 -0.8899 28 1 1.5616 2.4679 1.2084 29 1 3.5346 1.7702 -0.0322 30 1 2.8303 1.0430 2.0586 31 1 3.6526 -0.1124 4.0705 32 1 3.2067 -2.5128 4.3822 33 1 1.9725 -4.1568 4.7598 34 1 3.4939 -4.5400 3.9190 35 1 2.4795 -6.6202 3.0299 36 1 0.9579 -6.2376 3.8705 37 1 2.1453 -6.2916 6.0463 38 1 3.6672 -6.6742 5.2063 39 1 3.0985 -8.6417 6.9580 40 1 1.1597 -10.5511 6.2017 41 1 2.6814 -10.9337 5.3613 42 1 3.8689 -10.9878 7.5378 43 1 2.3469 -10.6050 8.3776 44 1 3.1100 -13.8303 5.8306 45 1 4.4486 -13.0515 6.7809 46 1 4.7041 -15.8737 7.8241 47 1 3.6400 -12.8315 9.3453 48 1 1.9626 -13.5166 9.4710 49 1 1.1324 -2.6051 0.6468 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17837616_4549616.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:47:28 Heat of formation + Delta-G solvation = -120.397518 kcal Electronic energy + Delta-G solvation = -27035.336925 eV Core-core repulsion = 22929.484044 eV Total energy + Delta-G solvation = -4105.852881 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.182 amu Computer time = 1.18 seconds Orbital eigenvalues (eV) -41.39059 -40.91183 -40.29338 -39.18563 -37.37020 -36.86739 -35.63071 -34.94847 -32.68691 -31.87475 -31.21471 -28.44575 -26.89253 -26.71376 -25.50193 -23.83054 -23.37928 -22.58820 -21.84049 -21.36496 -20.44627 -19.00228 -18.50374 -18.42677 -18.06990 -17.55226 -17.51623 -17.04953 -17.01346 -16.74428 -16.27153 -15.88977 -15.70706 -15.42029 -15.34650 -14.89115 -14.70142 -14.63729 -14.37567 -14.13771 -14.03477 -13.56536 -13.41832 -13.35843 -13.26480 -13.24001 -12.70340 -12.64800 -12.50591 -12.42104 -12.27827 -12.12577 -11.98318 -11.78088 -11.68700 -11.66282 -11.20262 -11.00736 -10.67535 -10.39534 -10.15497 -10.00740 -9.38556 -4.93738 0.07793 0.24103 1.27403 1.58323 1.65144 1.88028 1.96972 2.33753 2.51624 3.29482 3.38669 3.49858 3.59377 3.61462 3.70612 3.78368 3.80432 3.83699 3.84444 3.97236 3.98260 4.05912 4.12268 4.15326 4.23905 4.30264 4.33416 4.37864 4.38235 4.40493 4.59130 4.59862 4.60750 4.69853 4.79378 4.83038 4.85497 4.93395 4.97533 5.01110 5.07554 5.11921 5.16725 5.21278 5.24970 5.30088 5.41501 5.47501 5.58232 6.32148 6.50461 6.85056 6.87830 7.21659 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.565 6.565 2 C -0.088 4.088 3 Si 0.787 3.213 4 C -0.052 4.052 5 C -0.184 4.184 6 C -0.074 4.074 7 C -0.205 4.205 8 C 0.123 3.877 9 O -0.333 6.333 10 C 0.056 3.944 11 C -0.101 4.101 12 C -0.127 4.127 13 C 0.506 3.494 14 O -0.592 6.592 15 N -0.720 5.720 16 C 0.120 3.880 17 C -0.108 4.108 18 C -0.103 4.103 19 H 0.100 0.900 20 C -0.165 4.165 21 C 0.067 3.933 22 H 0.092 0.908 23 O -0.583 6.583 24 C -0.127 4.127 25 C -0.147 4.147 26 H 0.404 0.596 27 H 0.091 0.909 28 H -0.293 1.293 29 H -0.286 1.286 30 H 0.121 0.879 31 H 0.155 0.845 32 H 0.160 0.840 33 H 0.083 0.917 34 H 0.085 0.915 35 H 0.061 0.939 36 H 0.060 0.940 37 H 0.128 0.872 38 H 0.128 0.872 39 H 0.418 0.582 40 H 0.056 0.944 41 H 0.053 0.947 42 H 0.078 0.922 43 H 0.085 0.915 44 H 0.071 0.929 45 H 0.084 0.916 46 H 0.393 0.607 47 H 0.084 0.916 48 H 0.079 0.921 49 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.821 1.698 2.428 4.091 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.375 6.375 2 C -0.197 4.197 3 Si 0.692 3.308 4 C -0.053 4.053 5 C -0.201 4.201 6 C -0.092 4.092 7 C -0.223 4.223 8 C 0.077 3.923 9 O -0.248 6.248 10 C -0.019 4.019 11 C -0.140 4.140 12 C -0.167 4.167 13 C 0.294 3.706 14 O -0.472 6.472 15 N -0.373 5.373 16 C -0.004 4.004 17 C -0.145 4.145 18 C -0.122 4.122 19 H 0.118 0.882 20 C -0.203 4.203 21 C 0.008 3.992 22 H 0.110 0.890 23 O -0.392 6.392 24 C -0.164 4.164 25 C -0.166 4.166 26 H 0.255 0.745 27 H 0.109 0.891 28 H -0.221 1.221 29 H -0.213 1.213 30 H 0.139 0.861 31 H 0.173 0.827 32 H 0.177 0.823 33 H 0.102 0.898 34 H 0.103 0.897 35 H 0.080 0.920 36 H 0.079 0.921 37 H 0.146 0.854 38 H 0.146 0.854 39 H 0.256 0.744 40 H 0.074 0.926 41 H 0.071 0.929 42 H 0.096 0.904 43 H 0.104 0.896 44 H 0.090 0.910 45 H 0.102 0.898 46 H 0.243 0.757 47 H 0.103 0.897 48 H 0.098 0.902 49 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges 2.803 1.919 3.082 4.587 hybrid contribution 0.217 -1.099 0.027 1.120 sum 3.020 0.821 3.109 4.412 Atomic orbital electron populations 1.86451 1.17187 1.82524 1.51347 1.25009 0.85984 1.11818 0.96907 0.94299 0.77253 0.74697 0.84591 1.19497 0.96900 0.93097 0.95778 1.21025 1.03388 0.99465 0.96246 1.21226 0.97114 0.94103 0.96738 1.21591 1.04039 0.95773 1.00923 1.19188 0.95107 0.83237 0.94738 1.86059 1.74763 1.19912 1.44020 1.23038 1.00044 0.93065 0.85703 1.21149 1.02016 0.92376 0.98413 1.21533 1.05323 0.89931 0.99881 1.21204 0.78131 0.89996 0.81299 1.90734 1.42094 1.76701 1.37707 1.45956 1.57705 1.09959 1.23669 1.21311 0.99805 0.80433 0.98837 1.21657 1.01881 0.94383 0.96601 1.22229 0.99783 0.93531 0.96613 0.88184 1.23756 1.00002 0.97971 0.98588 1.23504 0.87206 0.92942 0.95542 0.89038 1.86482 1.43044 1.51214 1.58415 1.23130 1.01469 0.95113 0.96720 1.20384 1.03860 0.94179 0.98131 0.74492 0.89093 1.22115 1.21345 0.86149 0.82701 0.82260 0.89847 0.89674 0.92027 0.92124 0.85414 0.85395 0.74426 0.92601 0.92899 0.90385 0.89645 0.91026 0.89773 0.75724 0.89709 0.90222 0.85394 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 -1.52 12.81 -148.98 -1.91 -3.42 16 2 C -0.09 -0.19 2.79 71.24 0.20 0.01 16 3 Si 0.79 -0.75 29.85 68.60 2.05 1.30 16 4 C -0.05 -0.41 5.38 -19.88 -0.11 -0.52 16 5 C -0.18 -1.23 8.67 22.28 0.19 -1.04 16 6 C -0.07 -0.24 10.04 22.25 0.22 -0.02 16 7 C -0.20 -0.61 9.04 22.37 0.20 -0.41 16 8 C 0.12 0.94 6.69 22.51 0.15 1.09 16 9 O -0.33 -2.50 10.14 -92.44 -0.94 -3.44 16 10 C 0.06 -0.06 4.74 71.98 0.34 0.28 16 11 C -0.10 -0.09 4.87 30.59 0.15 0.05 16 12 C -0.13 0.73 5.70 29.85 0.17 0.90 16 13 C 0.51 1.12 7.83 87.66 0.69 1.80 16 14 O -0.59 -7.92 15.98 -3.03 -0.05 -7.97 16 15 N -0.72 2.39 5.56 -463.06 -2.57 -0.18 16 16 C 0.12 -0.16 5.66 86.38 0.49 0.33 16 17 C -0.11 0.62 5.16 30.60 0.16 0.77 16 18 C -0.10 0.41 3.65 -10.26 -0.04 0.37 16 19 H 0.10 -0.44 8.13 -2.39 -0.02 -0.46 16 20 C -0.17 0.39 7.46 31.12 0.23 0.63 16 21 C 0.07 -0.09 5.21 31.12 0.16 0.07 16 22 H 0.09 -0.34 8.14 -2.39 -0.02 -0.35 16 23 O -0.58 -0.97 13.67 -148.98 -2.04 -3.00 16 24 C -0.13 0.28 7.47 31.12 0.23 0.51 16 25 C -0.15 -1.39 9.62 22.37 0.22 -1.18 16 26 H 0.40 -3.41 8.74 -74.06 -0.65 -4.06 16 27 H 0.09 -0.13 7.96 -2.39 -0.02 -0.15 16 28 H -0.29 -1.76 7.05 99.48 0.70 -1.06 16 29 H -0.29 -1.16 7.11 99.48 0.71 -0.45 16 30 H 0.12 0.65 4.86 -2.91 -0.01 0.64 16 31 H 0.16 -0.40 8.06 -2.91 -0.02 -0.42 16 32 H 0.16 -0.58 6.30 -2.91 -0.02 -0.60 16 33 H 0.08 -0.40 7.65 -2.39 -0.02 -0.42 16 34 H 0.09 -0.44 7.67 -2.39 -0.02 -0.46 16 35 H 0.06 0.33 8.10 -2.39 -0.02 0.31 16 36 H 0.06 0.33 8.10 -2.39 -0.02 0.32 16 37 H 0.13 -1.43 8.14 -2.39 -0.02 -1.45 16 38 H 0.13 -1.44 8.14 -2.39 -0.02 -1.46 16 39 H 0.42 -4.33 8.47 -92.71 -0.79 -5.12 16 40 H 0.06 0.09 8.14 -2.39 -0.02 0.07 16 41 H 0.05 0.12 8.14 -2.39 -0.02 0.10 16 42 H 0.08 -0.49 7.84 -2.39 -0.02 -0.51 16 43 H 0.08 -0.65 8.14 -2.39 -0.02 -0.66 16 44 H 0.07 -0.19 8.14 -2.39 -0.02 -0.21 16 45 H 0.08 -0.09 7.90 -2.39 -0.02 -0.11 16 46 H 0.39 -2.40 9.12 -74.06 -0.68 -3.07 16 47 H 0.08 -0.07 8.10 -2.39 -0.02 -0.09 16 48 H 0.08 -0.25 8.14 -2.39 -0.02 -0.27 16 49 H 0.13 1.22 8.06 -2.91 -0.02 1.20 16 Total: 0.00 -28.90 402.36 -2.90 -31.80 By element: Atomic # 1 Polarization: -17.64 SS G_CDS: -1.11 Total: -18.75 kcal Atomic # 6 Polarization: 0.00 SS G_CDS: 3.66 Total: 3.66 kcal Atomic # 7 Polarization: 2.39 SS G_CDS: -2.57 Total: -0.18 kcal Atomic # 8 Polarization: -12.90 SS G_CDS: -4.93 Total: -17.83 kcal Atomic # 14 Polarization: -0.75 SS G_CDS: 2.05 Total: 1.30 kcal Total: -28.90 -2.90 -31.80 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17837616_4549616.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -88.595 kcal (2) G-P(sol) polarization free energy of solvation -28.901 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -117.496 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.901 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.802 kcal (6) G-S(sol) free energy of system = (1) + (5) -120.398 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.18 seconds