Wall clock time and date at job start Sun Mar 7 2021 10:47:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86300 * 109.47030 * 2 1 4 4 C 1.50700 * 109.46837 * 119.99435 * 2 1 3 5 5 C 1.38267 * 119.94480 * 244.72721 * 4 2 1 6 6 C 1.38145 * 120.05357 * 179.72783 * 5 4 2 7 7 C 1.38742 * 119.94367 * 0.54993 * 6 5 4 8 8 O 1.35895 * 120.05656 * 179.74834 * 7 6 5 9 9 C 1.42901 * 116.99908 * 359.97405 * 8 7 6 10 10 C 1.50698 * 109.47257 * 179.97438 * 9 8 7 11 11 C 1.36421 * 125.79881 * 89.71855 * 10 9 8 12 12 C 1.47381 * 127.18942 * 359.96117 * 11 10 9 13 13 O 1.21615 * 120.00506 * 0.02562 * 12 11 10 14 14 N 1.34784 * 119.99737 * 180.02562 * 12 11 10 15 15 C 1.46500 * 119.99571 * 180.02562 * 14 12 11 16 16 C 1.53000 * 109.46753 * 179.97438 * 15 14 12 17 17 C 1.53005 * 109.47299 * 179.97438 * 16 15 14 18 18 H 1.08998 * 112.84140 * 45.33376 * 17 16 15 19 19 C 1.53779 * 113.61389 * 176.52711 * 17 16 15 20 20 C 1.53785 * 87.07906 * 139.98318 * 19 17 16 21 21 H 1.09000 * 113.61324 * 89.11390 * 20 19 17 22 22 O 1.42890 * 113.61568 * 220.01807 * 20 19 17 23 23 C 1.53774 * 113.61426 * 274.13959 * 17 16 15 24 24 C 1.47020 * 105.61499 * 179.87297 * 11 10 9 25 25 C 1.34173 * 105.95476 * 0.38808 * 24 11 10 26 26 O 1.33651 * 125.80515 * 270.02752 * 10 9 8 27 27 C 1.38733 * 119.88747 * 359.72289 * 7 6 5 28 28 C 1.38151 * 119.94633 * 0.02562 * 27 7 6 29 29 H 0.96700 * 114.00022 * 300.00827 * 1 2 3 30 30 H 1.08997 * 109.47097 * 240.00027 * 2 1 3 31 31 H 1.48506 * 110.00048 * 178.68200 * 3 2 1 32 32 H 1.48502 * 109.99996 * 299.99525 * 3 2 1 33 33 H 1.07997 * 119.97016 * 359.97438 * 5 4 2 34 34 H 1.07996 * 120.02944 * 180.27311 * 6 5 4 35 35 H 1.08997 * 109.47441 * 299.99948 * 9 8 7 36 36 H 1.09003 * 109.47107 * 60.00202 * 9 8 7 37 37 H 0.97000 * 119.99707 * 0.02562 * 14 12 11 38 38 H 1.09007 * 109.46822 * 299.99535 * 15 14 12 39 39 H 1.08993 * 109.47593 * 59.99807 * 15 14 12 40 40 H 1.09003 * 109.47351 * 299.99801 * 16 15 14 41 41 H 1.09003 * 109.47199 * 59.99677 * 16 15 14 42 42 H 1.09001 * 113.61300 * 254.53243 * 19 17 16 43 43 H 1.08998 * 113.61613 * 25.35344 * 19 17 16 44 44 H 0.96703 * 114.00142 * 180.02562 * 22 20 19 45 45 H 1.08997 * 113.61542 * 334.56319 * 23 17 16 46 46 H 1.09004 * 113.61590 * 105.46799 * 23 17 16 47 47 H 1.08005 * 127.02018 * 180.12874 * 24 11 10 48 48 H 1.08003 * 125.43941 * 179.72279 * 25 24 11 49 49 H 1.07996 * 120.02943 * 179.97438 * 27 7 6 50 50 H 1.07994 * 119.97256 * 179.97438 * 28 27 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 1.2306 5 6 2.6436 -0.0121 2.1881 6 6 3.1002 -0.6597 3.3197 7 6 2.8534 -2.0144 3.4894 8 8 3.3059 -2.6549 4.5992 9 6 4.0295 -1.8716 5.5506 10 6 4.4478 -2.7444 6.7056 11 6 5.6125 -3.4495 6.7922 12 6 6.6938 -3.5098 5.7925 13 8 6.5978 -2.8837 4.7543 14 7 7.7891 -4.2589 6.0289 15 6 8.8641 -4.3183 5.0354 16 6 9.9811 -5.2304 5.5467 17 6 11.1036 -5.2931 4.5089 18 1 11.3672 -4.3131 4.1111 19 6 12.3176 -6.1202 4.9639 20 6 12.3854 -6.6651 3.5274 21 1 12.9995 -6.0608 2.8597 22 8 12.6935 -8.0586 3.4577 23 6 10.8801 -6.3590 3.4234 24 6 5.5645 -4.1349 8.0919 25 6 4.3933 -3.7895 8.6480 26 8 3.7384 -2.9639 7.8168 27 6 2.1433 -2.7139 2.5244 28 6 1.6843 -2.0605 1.3971 29 1 -0.3933 0.4418 0.7650 30 1 1.7923 -0.5138 -0.8900 31 1 3.5346 1.7703 0.0321 32 1 1.5616 2.4679 -1.2086 33 1 2.8396 1.0413 2.0531 34 1 3.6527 -0.1129 4.0694 35 1 4.9145 -1.4488 5.0751 36 1 3.3935 -1.0656 5.9165 37 1 7.8654 -4.7585 6.8568 38 1 8.4716 -4.7140 4.0986 39 1 9.2608 -3.3169 4.8689 40 1 10.3734 -4.8343 6.4834 41 1 9.5846 -6.2319 5.7135 42 1 13.1796 -5.5138 5.2420 43 1 12.0752 -6.8781 5.7088 44 1 12.7379 -8.4071 2.5568 45 1 10.2437 -7.1833 3.7453 46 1 10.5833 -5.9452 2.4596 47 1 6.3164 -4.7870 8.5114 48 1 4.0345 -4.1231 9.6106 49 1 1.9503 -3.7685 2.6540 50 1 1.1319 -2.6048 0.6454 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17837616_4549634.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:47:39 Heat of formation + Delta-G solvation = -86.700802 kcal Electronic energy + Delta-G solvation = -32820.909867 eV Core-core repulsion = 28168.695191 eV Total energy + Delta-G solvation = -4652.214676 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.165 amu Computer time = 1.44 seconds Orbital eigenvalues (eV) -43.72821 -41.31653 -40.77121 -40.20556 -39.23643 -37.19783 -36.85388 -35.67274 -34.17497 -32.88761 -32.00461 -31.54993 -31.39122 -28.00760 -26.74260 -26.31733 -25.92830 -24.17489 -23.78374 -22.72442 -22.40975 -22.05478 -20.99618 -20.44227 -19.52193 -19.20807 -18.41982 -18.24434 -17.42384 -17.26036 -17.16795 -16.94193 -16.72143 -16.59167 -16.43212 -16.22628 -15.92209 -15.69910 -15.38975 -15.35755 -15.23298 -14.71427 -14.60580 -14.37003 -14.22951 -14.13709 -13.87137 -13.70826 -13.49651 -13.42059 -13.33876 -13.11760 -12.71837 -12.49275 -12.28703 -12.09223 -12.08212 -11.98705 -11.78541 -11.69290 -11.26070 -11.13931 -10.98953 -10.68542 -10.41887 -10.23292 -10.07936 -9.84153 -9.26526 -5.01249 -0.05778 0.24668 0.27053 1.02160 1.32103 1.50341 1.63789 1.95946 2.03572 2.11081 2.45412 2.62312 3.29273 3.33329 3.48963 3.54998 3.59185 3.61408 3.67660 3.70028 3.77347 3.78634 3.89754 3.93358 3.98374 4.07615 4.10315 4.24045 4.27265 4.36394 4.40053 4.44862 4.48099 4.57016 4.59154 4.64109 4.69021 4.79458 4.79607 4.82678 4.93031 4.93259 4.99436 5.10451 5.11939 5.22854 5.24547 5.24740 5.33549 5.45312 5.47555 5.66442 5.87231 6.23851 6.40784 6.78901 6.85214 7.06900 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.556 6.556 2 C -0.069 4.069 3 Si 0.776 3.224 4 C -0.161 4.161 5 C -0.074 4.074 6 C -0.205 4.205 7 C 0.124 3.876 8 O -0.323 6.323 9 C 0.135 3.865 10 C 0.041 3.959 11 C -0.225 4.225 12 C 0.580 3.420 13 O -0.574 6.574 14 N -0.709 5.709 15 C 0.123 3.877 16 C -0.108 4.108 17 C -0.101 4.101 18 H 0.103 0.897 19 C -0.126 4.126 20 C 0.067 3.933 21 H 0.093 0.907 22 O -0.583 6.583 23 C -0.167 4.167 24 C -0.198 4.198 25 C -0.011 4.011 26 O -0.176 6.176 27 C -0.164 4.164 28 C -0.059 4.059 29 H 0.395 0.605 30 H 0.105 0.895 31 H -0.288 1.288 32 H -0.298 1.298 33 H 0.152 0.848 34 H 0.149 0.851 35 H 0.106 0.894 36 H 0.104 0.896 37 H 0.415 0.585 38 H 0.055 0.945 39 H 0.063 0.937 40 H 0.087 0.913 41 H 0.076 0.924 42 H 0.081 0.919 43 H 0.084 0.916 44 H 0.393 0.607 45 H 0.082 0.918 46 H 0.071 0.929 47 H 0.192 0.808 48 H 0.253 0.747 49 H 0.132 0.868 50 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.922 0.619 6.579 6.882 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.364 6.364 2 C -0.179 4.179 3 Si 0.682 3.318 4 C -0.162 4.162 5 C -0.091 4.091 6 C -0.223 4.223 7 C 0.079 3.921 8 O -0.238 6.238 9 C 0.061 3.939 10 C -0.012 4.012 11 C -0.230 4.230 12 C 0.369 3.631 13 O -0.455 6.455 14 N -0.361 5.361 15 C 0.000 4.000 16 C -0.146 4.146 17 C -0.120 4.120 18 H 0.121 0.879 19 C -0.164 4.164 20 C 0.009 3.991 21 H 0.110 0.890 22 O -0.391 6.391 23 C -0.204 4.204 24 C -0.217 4.217 25 C -0.076 4.076 26 O -0.072 6.072 27 C -0.182 4.182 28 C -0.077 4.077 29 H 0.245 0.755 30 H 0.122 0.878 31 H -0.215 1.215 32 H -0.226 1.226 33 H 0.170 0.830 34 H 0.167 0.833 35 H 0.124 0.876 36 H 0.122 0.878 37 H 0.253 0.747 38 H 0.073 0.927 39 H 0.082 0.918 40 H 0.106 0.894 41 H 0.094 0.906 42 H 0.099 0.901 43 H 0.103 0.897 44 H 0.243 0.757 45 H 0.100 0.900 46 H 0.090 0.910 47 H 0.209 0.791 48 H 0.269 0.731 49 H 0.150 0.850 50 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges 2.163 1.302 5.650 6.189 hybrid contribution 0.407 -1.098 -0.569 1.302 sum 2.570 0.204 5.081 5.698 Atomic orbital electron populations 1.86461 1.17268 1.82201 1.50478 1.25114 0.85235 1.10720 0.96811 0.93799 0.77725 0.75409 0.84829 1.20358 1.02634 0.95051 0.98145 1.21017 0.95632 1.00070 0.92413 1.21433 1.06140 0.93321 1.01437 1.19186 0.94447 0.91792 0.86672 1.86047 1.69009 1.39025 1.29685 1.21151 0.98187 0.90799 0.83800 1.22060 0.90776 1.00243 0.88146 1.21392 0.97378 1.05555 0.98691 1.17480 0.81779 0.78867 0.84994 1.90776 1.80370 1.46286 1.28111 1.45701 1.18369 1.48786 1.23207 1.21377 0.86910 1.00424 0.91304 1.21668 0.93741 0.99872 0.99324 1.22213 0.95031 0.98558 0.96151 0.87928 1.23121 0.98501 0.98784 0.95958 1.23535 0.94843 0.82089 0.98678 0.88970 1.86481 1.93577 1.24432 1.34648 1.23786 0.97627 0.99197 0.99836 1.23255 1.00823 1.04629 0.92958 1.24923 0.92563 0.92933 0.97208 1.83795 1.44458 1.53761 1.25137 1.20622 1.02333 1.01052 0.94213 1.20948 0.96699 0.93984 0.96053 0.75498 0.87776 1.21546 1.22597 0.83049 0.83296 0.87627 0.87789 0.74746 0.92692 0.91830 0.89449 0.90554 0.90081 0.89749 0.75737 0.89960 0.91029 0.79122 0.73103 0.85005 0.84386 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -1.02 12.83 -148.98 -1.91 -2.93 16 2 C -0.07 -0.10 2.80 71.24 0.20 0.10 16 3 Si 0.78 -0.54 29.80 68.60 2.04 1.50 16 4 C -0.16 -0.49 5.35 -19.85 -0.11 -0.60 16 5 C -0.07 -0.11 8.66 22.25 0.19 0.08 16 6 C -0.20 -0.75 9.04 22.37 0.20 -0.55 16 7 C 0.12 0.97 6.69 22.51 0.15 1.12 16 8 O -0.32 -3.13 10.12 -92.37 -0.93 -4.06 16 9 C 0.13 0.68 4.73 71.24 0.34 1.02 16 10 C 0.04 0.22 7.00 25.26 0.18 0.40 16 11 C -0.23 -0.95 6.31 -18.99 -0.12 -1.07 16 12 C 0.58 4.07 7.81 86.65 0.68 4.74 16 13 O -0.57 -8.19 14.85 -4.08 -0.06 -8.25 16 14 N -0.71 -0.05 5.55 -466.40 -2.59 -2.63 16 15 C 0.12 -0.04 5.67 86.38 0.49 0.45 16 16 C -0.11 0.55 5.15 30.60 0.16 0.71 16 17 C -0.10 0.39 3.64 -10.27 -0.04 0.35 16 18 H 0.10 -0.49 8.14 -2.39 -0.02 -0.51 16 19 C -0.13 0.27 7.48 31.12 0.23 0.51 16 20 C 0.07 -0.08 5.21 31.18 0.16 0.08 16 21 H 0.09 -0.34 8.14 -2.39 -0.02 -0.36 16 22 O -0.58 -1.11 13.67 -148.98 -2.04 -3.15 16 23 C -0.17 0.32 7.48 31.18 0.23 0.56 16 24 C -0.20 0.68 10.60 23.65 0.25 0.93 16 25 C -0.01 0.05 12.03 66.89 0.80 0.85 16 26 O -0.18 -0.45 10.52 4.44 0.05 -0.40 16 27 C -0.16 -1.17 9.99 22.37 0.22 -0.94 16 28 C -0.06 -0.29 9.68 22.26 0.22 -0.08 16 29 H 0.40 -2.50 8.70 -74.06 -0.64 -3.14 16 30 H 0.10 0.29 7.96 -2.39 -0.02 0.27 16 31 H -0.29 -1.29 7.11 99.48 0.71 -0.58 16 32 H -0.30 -1.94 7.11 99.48 0.71 -1.23 16 33 H 0.15 -0.58 4.90 -2.91 -0.01 -0.60 16 34 H 0.15 -0.09 6.30 -2.91 -0.02 -0.11 16 35 H 0.11 0.67 6.02 -2.39 -0.01 0.66 16 36 H 0.10 -0.03 7.66 -2.39 -0.02 -0.05 16 37 H 0.42 -2.53 7.64 -92.71 -0.71 -3.24 16 38 H 0.05 0.17 8.14 -2.38 -0.02 0.15 16 39 H 0.06 0.08 8.14 -2.39 -0.02 0.07 16 40 H 0.09 -0.63 8.14 -2.39 -0.02 -0.65 16 41 H 0.08 -0.39 7.87 -2.39 -0.02 -0.41 16 42 H 0.08 -0.27 8.14 -2.39 -0.02 -0.29 16 43 H 0.08 -0.05 8.10 -2.39 -0.02 -0.07 16 44 H 0.39 -2.28 9.12 -74.06 -0.68 -2.95 16 45 H 0.08 -0.02 7.92 -2.39 -0.02 -0.04 16 46 H 0.07 -0.15 8.14 -2.39 -0.02 -0.17 16 47 H 0.19 -2.02 7.74 -2.91 -0.02 -2.04 16 48 H 0.25 -3.42 8.06 -2.91 -0.02 -3.45 16 49 H 0.13 0.80 8.06 -2.91 -0.02 0.77 16 50 H 0.14 0.42 8.06 -2.91 -0.02 0.40 16 Total: 0.00 -26.85 417.98 -1.99 -28.84 By element: Atomic # 1 Polarization: -16.58 SS G_CDS: -0.98 Total: -17.57 kcal Atomic # 6 Polarization: 4.21 SS G_CDS: 4.44 Total: 8.65 kcal Atomic # 7 Polarization: -0.05 SS G_CDS: -2.59 Total: -2.63 kcal Atomic # 8 Polarization: -13.89 SS G_CDS: -4.90 Total: -18.79 kcal Atomic # 14 Polarization: -0.54 SS G_CDS: 2.04 Total: 1.50 kcal Total: -26.85 -1.99 -28.84 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17837616_4549634.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -57.863 kcal (2) G-P(sol) polarization free energy of solvation -26.853 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -84.715 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.985 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.838 kcal (6) G-S(sol) free energy of system = (1) + (5) -86.701 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.44 seconds