Wall clock time and date at job start Sun Mar 7 2021 10:47:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86303 * 109.47066 * 2 1 4 4 C 1.50697 * 109.47368 * 240.00205 * 2 1 3 5 5 C 1.38247 * 119.97556 * 120.02313 * 4 2 1 6 6 C 1.38289 * 120.11063 * 179.97438 * 5 4 2 7 7 C 1.38119 * 120.05725 * 359.67824 * 6 5 4 8 8 C 1.38757 * 119.94357 * 0.59747 * 7 6 5 9 9 O 1.35896 * 120.05546 * 179.70074 * 8 7 6 10 10 C 1.42903 * 117.00417 * 359.72575 * 9 8 7 11 11 C 1.50690 * 109.47637 * 180.02562 * 10 9 8 12 12 O 1.21287 * 119.99691 * 359.97438 * 11 10 9 13 13 N 1.34772 * 120.00534 * 179.97438 * 11 10 9 14 14 C 1.46501 * 120.00560 * 179.97438 * 13 11 10 15 15 C 1.52999 * 109.47146 * 179.97438 * 14 13 11 16 16 C 1.52999 * 109.46901 * 179.97438 * 15 14 13 17 17 H 1.09005 * 112.85066 * 43.80792 * 16 15 14 18 18 C 1.53787 * 113.61615 * 175.00000 * 16 15 14 19 19 C 1.53781 * 87.07987 * 139.98149 * 18 16 15 20 20 H 1.09002 * 113.61228 * 89.11929 * 19 18 16 21 21 O 1.42901 * 113.61413 * 219.93588 * 19 18 16 22 22 C 1.53779 * 113.61451 * 272.49954 * 16 15 14 23 23 C 1.38170 * 119.96881 * 299.99790 * 4 2 1 24 24 H 0.96707 * 113.99675 * 60.00281 * 1 2 3 25 25 H 1.08998 * 109.46904 * 119.99995 * 2 1 3 26 26 H 1.48497 * 110.00100 * 298.67900 * 3 2 1 27 27 H 1.48505 * 109.99743 * 60.00060 * 3 2 1 28 28 H 1.07997 * 119.93986 * 359.97438 * 5 4 2 29 29 H 1.08004 * 119.96595 * 179.97438 * 6 5 4 30 30 H 1.08003 * 120.02915 * 180.32252 * 7 6 5 31 31 H 1.08997 * 109.47051 * 59.99471 * 10 9 8 32 32 H 1.09006 * 109.46500 * 300.00441 * 10 9 8 33 33 H 0.97000 * 119.99619 * 359.97438 * 13 11 10 34 34 H 1.09003 * 109.47080 * 59.99961 * 14 13 11 35 35 H 1.08998 * 109.46682 * 300.00109 * 14 13 11 36 36 H 1.09003 * 109.46945 * 60.00144 * 15 14 13 37 37 H 1.08995 * 109.47142 * 299.99862 * 15 14 13 38 38 H 1.09005 * 113.61051 * 25.43553 * 18 16 15 39 39 H 1.08993 * 113.61359 * 254.53591 * 18 16 15 40 40 H 0.96698 * 114.00171 * 178.47521 * 21 19 18 41 41 H 1.09003 * 113.61775 * 105.47647 * 22 16 15 42 42 H 1.08996 * 113.61960 * 334.56374 * 22 16 15 43 43 H 1.07997 * 120.03068 * 0.04703 * 23 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7103 -1.2304 5 6 2.7266 -0.0381 -2.1398 6 6 3.1896 -0.6874 -3.2696 7 6 2.8639 -2.0116 -3.4888 8 6 2.0612 -2.6869 -2.5805 9 8 1.7344 -3.9881 -2.7971 10 6 2.2471 -4.5971 -3.9838 11 6 1.7836 -6.0292 -4.0542 12 8 1.0834 -6.4839 -3.1744 13 7 2.1470 -6.8049 -5.0947 14 6 1.6969 -8.1973 -5.1628 15 6 2.2447 -8.8488 -6.4342 16 6 1.7751 -10.3032 -6.5049 17 1 0.7232 -10.4215 -6.2449 18 6 2.1712 -11.0157 -7.8090 19 6 2.4702 -12.2548 -6.9487 20 1 1.6087 -12.9078 -6.8093 21 8 3.6435 -12.9631 -7.3535 22 6 2.7060 -11.2872 -5.7769 23 6 1.5973 -2.0332 -1.4485 24 1 -0.3933 0.4417 -0.7651 25 1 1.7923 -0.5138 0.8900 26 1 1.5879 2.4586 -1.2242 27 1 1.5614 2.4679 1.2086 28 1 2.9866 0.9959 -1.9675 29 1 3.8103 -0.1598 -3.9787 30 1 3.2300 -2.5197 -4.3687 31 1 3.3365 -4.5679 -3.9656 32 1 1.8837 -4.0546 -4.8566 33 1 2.7067 -6.4411 -5.7985 34 1 0.6074 -8.2265 -5.1806 35 1 2.0607 -8.7398 -4.2903 36 1 3.3342 -8.8196 -6.4168 37 1 1.8805 -8.3062 -7.3064 38 1 3.0547 -10.5924 -8.2868 39 1 1.3402 -11.1544 -8.5005 40 1 3.8499 -13.7300 -6.8019 41 1 2.3066 -11.6454 -4.8280 42 1 3.7356 -10.9383 -5.6993 43 1 0.9758 -2.5578 -0.7380 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17837616_4860298.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:47:58 Heat of formation + Delta-G solvation = -106.021346 kcal Electronic energy + Delta-G solvation = -23998.331181 eV Core-core repulsion = 20204.176935 eV Total energy + Delta-G solvation = -3794.154245 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.150 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -41.57555 -40.73836 -40.25896 -39.02644 -37.38148 -36.82190 -35.66325 -32.51538 -32.27709 -31.34680 -29.13990 -26.86960 -26.70200 -25.43227 -23.67761 -22.74074 -22.52226 -21.54899 -20.44789 -19.36297 -18.66202 -18.30425 -17.81007 -17.54835 -17.30461 -17.00131 -16.67171 -16.41547 -16.24590 -16.06186 -15.47872 -15.36627 -15.18217 -14.90709 -14.68364 -14.19074 -14.15227 -13.98193 -13.48225 -13.40135 -13.31891 -13.00442 -12.71013 -12.61182 -12.47088 -12.12275 -12.04098 -11.98464 -11.68711 -11.61186 -11.19499 -11.05750 -10.69726 -10.66942 -10.25703 -9.93362 -9.29475 -4.91172 0.20013 0.38632 1.27301 1.39435 1.48506 1.61938 1.96734 2.57632 2.66275 3.29555 3.39325 3.49756 3.53484 3.62388 3.65504 3.78942 3.84098 3.98903 3.99458 4.04327 4.09701 4.12798 4.24488 4.25295 4.36946 4.38001 4.54221 4.60634 4.63455 4.67877 4.80911 4.84001 4.94475 4.98039 5.00562 5.11672 5.24033 5.25760 5.30220 5.36708 5.44389 5.48927 5.68928 6.25630 6.43670 6.45424 6.85996 7.07893 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.551 6.551 2 C -0.095 4.095 3 Si 0.786 3.214 4 C -0.082 4.082 5 C -0.157 4.157 6 C -0.070 4.070 7 C -0.202 4.202 8 C 0.112 3.888 9 O -0.324 6.324 10 C 0.039 3.961 11 C 0.509 3.491 12 O -0.577 6.577 13 N -0.709 5.709 14 C 0.122 3.878 15 C -0.107 4.107 16 C -0.102 4.102 17 H 0.100 0.900 18 C -0.126 4.126 19 C 0.066 3.934 20 H 0.090 0.910 21 O -0.583 6.583 22 C -0.166 4.166 23 C -0.150 4.150 24 H 0.386 0.614 25 H 0.119 0.881 26 H -0.276 1.276 27 H -0.305 1.305 28 H 0.150 0.850 29 H 0.164 0.836 30 H 0.161 0.839 31 H 0.127 0.873 32 H 0.126 0.874 33 H 0.422 0.578 34 H 0.058 0.942 35 H 0.056 0.944 36 H 0.081 0.919 37 H 0.088 0.912 38 H 0.086 0.914 39 H 0.079 0.921 40 H 0.393 0.607 41 H 0.071 0.929 42 H 0.085 0.915 43 H 0.111 0.889 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.118 1.435 -6.689 9.178 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.360 6.360 2 C -0.203 4.203 3 Si 0.690 3.310 4 C -0.083 4.083 5 C -0.174 4.174 6 C -0.088 4.088 7 C -0.220 4.220 8 C 0.067 3.933 9 O -0.238 6.238 10 C -0.039 4.039 11 C 0.295 3.705 12 O -0.456 6.456 13 N -0.364 5.364 14 C -0.002 4.002 15 C -0.145 4.145 16 C -0.121 4.121 17 H 0.118 0.882 18 C -0.164 4.164 19 C 0.007 3.993 20 H 0.108 0.892 21 O -0.391 6.391 22 C -0.204 4.204 23 C -0.169 4.169 24 H 0.235 0.765 25 H 0.137 0.863 26 H -0.203 1.203 27 H -0.234 1.234 28 H 0.167 0.833 29 H 0.181 0.819 30 H 0.179 0.821 31 H 0.145 0.855 32 H 0.143 0.857 33 H 0.260 0.740 34 H 0.077 0.923 35 H 0.074 0.926 36 H 0.099 0.901 37 H 0.106 0.894 38 H 0.104 0.896 39 H 0.097 0.903 40 H 0.243 0.757 41 H 0.089 0.911 42 H 0.104 0.896 43 H 0.129 0.871 Dipole moment (debyes) X Y Z Total from point charges 5.389 1.920 -5.869 8.196 hybrid contribution -1.186 -0.880 -0.092 1.479 sum 4.204 1.040 -5.961 7.368 Atomic orbital electron populations 1.86581 1.18709 1.80563 1.50112 1.25486 0.83447 1.12910 0.98446 0.93885 0.89987 0.70628 0.76461 1.20139 0.97919 0.93147 0.97051 1.21222 0.99981 1.00975 0.95232 1.21341 0.97294 0.93416 0.96723 1.21642 1.02272 0.96905 1.01204 1.19211 0.95819 0.82878 0.95343 1.86123 1.71371 1.23367 1.42937 1.22726 1.01991 0.90445 0.88738 1.20607 0.79917 0.88187 0.81751 1.90768 1.39046 1.75619 1.40142 1.45705 1.53657 1.12445 1.24588 1.21377 0.99313 0.80357 0.99144 1.21666 1.01726 0.94645 0.96451 1.22225 1.00106 0.93320 0.96490 0.88188 1.23128 1.01983 0.94511 0.96735 1.23510 0.88019 0.92063 0.95717 0.89192 1.86479 1.45878 1.47125 1.59668 1.23763 1.00581 0.97694 0.98319 1.20293 1.04058 0.94951 0.97618 0.76462 0.86295 1.20269 1.23376 0.83300 0.81882 0.82143 0.85523 0.85666 0.74015 0.92327 0.92596 0.90083 0.89363 0.89564 0.90255 0.75739 0.91069 0.89621 0.87101 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -3.20 12.77 -148.98 -1.90 -5.10 16 2 C -0.10 -0.18 2.82 71.24 0.20 0.02 16 3 Si 0.79 -1.46 29.79 68.60 2.04 0.58 16 4 C -0.08 -0.19 5.39 -19.88 -0.11 -0.30 16 5 C -0.16 0.34 8.67 22.28 0.19 0.53 16 6 C -0.07 0.31 10.04 22.25 0.22 0.53 16 7 C -0.20 0.53 9.04 22.37 0.20 0.73 16 8 C 0.11 0.52 6.69 22.51 0.15 0.67 16 9 O -0.32 -2.48 9.67 -73.34 -0.71 -3.19 16 10 C 0.04 -0.09 5.22 71.23 0.37 0.28 16 11 C 0.51 1.91 7.91 87.65 0.69 2.60 16 12 O -0.58 -9.33 16.50 15.99 0.26 -9.06 16 13 N -0.71 2.81 5.56 -463.07 -2.57 0.23 16 14 C 0.12 -0.26 5.67 86.38 0.49 0.23 16 15 C -0.11 0.75 5.17 30.59 0.16 0.90 16 16 C -0.10 0.50 3.65 -10.27 -0.04 0.46 16 17 H 0.10 -0.51 8.13 -2.38 -0.02 -0.53 16 18 C -0.13 0.37 7.47 31.12 0.23 0.60 16 19 C 0.07 -0.12 5.21 31.12 0.16 0.04 16 20 H 0.09 -0.35 8.14 -2.39 -0.02 -0.37 16 21 O -0.58 -0.70 13.67 -148.98 -2.04 -2.74 16 22 C -0.17 0.51 7.47 31.12 0.23 0.74 16 23 C -0.15 -1.04 9.55 22.37 0.21 -0.83 16 24 H 0.39 -0.13 8.70 -74.05 -0.64 -0.78 16 25 H 0.12 0.15 7.96 -2.39 -0.02 0.13 16 26 H -0.28 -0.24 7.11 99.48 0.71 0.46 16 27 H -0.31 -1.89 7.11 99.48 0.71 -1.18 16 28 H 0.15 -1.00 4.87 -2.91 -0.01 -1.02 16 29 H 0.16 -1.75 8.06 -2.91 -0.02 -1.78 16 30 H 0.16 -1.55 6.30 -2.91 -0.02 -1.57 16 31 H 0.13 -1.16 7.65 -2.39 -0.02 -1.18 16 32 H 0.13 -1.13 7.67 -2.38 -0.02 -1.15 16 33 H 0.42 -5.05 8.47 -92.71 -0.79 -5.84 16 34 H 0.06 0.04 8.14 -2.39 -0.02 0.02 16 35 H 0.06 0.08 8.14 -2.39 -0.02 0.06 16 36 H 0.08 -0.63 7.84 -2.39 -0.02 -0.65 16 37 H 0.09 -0.80 8.14 -2.39 -0.02 -0.82 16 38 H 0.09 -0.15 8.10 -2.38 -0.02 -0.17 16 39 H 0.08 -0.30 8.14 -2.39 -0.02 -0.32 16 40 H 0.39 -2.52 9.12 -74.06 -0.68 -3.20 16 41 H 0.07 -0.22 8.14 -2.39 -0.02 -0.24 16 42 H 0.09 -0.17 7.89 -2.39 -0.02 -0.19 16 43 H 0.11 1.18 8.06 -2.91 -0.02 1.15 16 Total: 0.00 -28.65 359.80 -2.55 -31.20 By element: Atomic # 1 Polarization: -18.13 SS G_CDS: -1.02 Total: -19.15 kcal Atomic # 6 Polarization: 3.84 SS G_CDS: 3.38 Total: 7.22 kcal Atomic # 7 Polarization: 2.81 SS G_CDS: -2.57 Total: 0.23 kcal Atomic # 8 Polarization: -15.71 SS G_CDS: -4.38 Total: -20.09 kcal Atomic # 14 Polarization: -1.46 SS G_CDS: 2.04 Total: 0.58 kcal Total: -28.65 -2.55 -31.20 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17837616_4860298.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -74.816 kcal (2) G-P(sol) polarization free energy of solvation -28.651 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -103.467 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.554 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.205 kcal (6) G-S(sol) free energy of system = (1) + (5) -106.021 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds