Wall clock time and date at job start Sun Mar 7 2021 10:48:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35895 * 117.00146 * 2 1 4 4 C 1.38607 * 120.02668 * 180.27709 * 3 2 1 5 5 C 1.38660 * 119.89050 * 180.20622 * 4 3 2 6 6 O 1.35889 * 120.02907 * 179.79308 * 5 4 3 7 7 C 1.42905 * 117.00168 * 359.72236 * 6 5 4 8 8 C 1.50701 * 109.47419 * 179.97438 * 7 6 5 9 9 O 1.21282 * 119.99864 * 0.02562 * 8 7 6 10 10 N 1.34771 * 120.00160 * 180.02562 * 8 7 6 11 11 C 1.46503 * 119.99908 * 180.02562 * 10 8 7 12 12 C 1.53000 * 109.46856 * 179.97438 * 11 10 8 13 13 C 1.52998 * 109.47090 * 180.02562 * 12 11 10 14 14 H 1.09003 * 112.85341 * 43.80353 * 13 12 11 15 15 C 1.53787 * 113.61787 * 174.99923 * 13 12 11 16 16 C 1.53781 * 87.07987 * 140.06383 * 15 13 12 17 17 H 1.09002 * 113.61228 * 89.11929 * 16 15 13 18 18 O 1.42901 * 113.61413 * 219.93588 * 16 15 13 19 19 C 1.53779 * 113.68908 * 272.53682 * 13 12 11 20 20 C 1.38750 * 119.94225 * 359.51924 * 5 4 3 21 21 C 1.50701 * 119.97275 * 180.27453 * 20 5 4 22 22 O 1.42901 * 109.46972 * 74.99773 * 21 20 5 23 23 Si 1.86303 * 109.47301 * 194.99831 * 21 20 5 24 24 C 1.38202 * 120.05710 * 0.24914 * 20 5 4 25 25 C 1.38158 * 120.10796 * 359.97438 * 24 20 5 26 26 H 1.09010 * 109.47258 * 180.02562 * 1 2 3 27 27 H 1.09002 * 109.47261 * 299.99616 * 1 2 3 28 28 H 1.08995 * 109.47501 * 60.00096 * 1 2 3 29 29 H 1.07999 * 120.05998 * 359.97387 * 4 3 2 30 30 H 1.09000 * 109.46745 * 60.00007 * 7 6 5 31 31 H 1.08997 * 109.47394 * 300.00464 * 7 6 5 32 32 H 0.97003 * 120.00121 * 359.97438 * 10 8 7 33 33 H 1.09005 * 109.47039 * 60.00350 * 11 10 8 34 34 H 1.08995 * 109.46846 * 299.99871 * 11 10 8 35 35 H 1.09002 * 109.47505 * 60.00004 * 12 11 10 36 36 H 1.09006 * 109.47283 * 300.00163 * 12 11 10 37 37 H 1.09005 * 113.61051 * 25.51787 * 15 13 12 38 38 H 1.08996 * 113.69311 * 254.62415 * 15 13 12 39 39 H 0.96698 * 114.00171 * 178.47521 * 18 16 15 40 40 H 1.09003 * 113.61775 * 105.46383 * 19 13 12 41 41 H 1.08996 * 113.61960 * 334.55110 * 19 13 12 42 42 H 1.08998 * 109.46925 * 314.99958 * 21 20 5 43 43 H 0.96700 * 114.00050 * 60.00487 * 22 21 20 44 44 H 1.48496 * 110.00201 * 179.97438 * 23 21 20 45 45 H 1.48499 * 109.99910 * 301.32093 * 23 21 20 46 46 H 1.08000 * 119.94367 * 180.02562 * 24 20 5 47 47 H 1.07993 * 119.97212 * 180.02562 * 25 24 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2108 0.0000 4 6 3.4301 1.2840 -0.0058 5 6 4.0567 2.5209 -0.0015 6 8 5.4135 2.5959 -0.0029 7 6 6.1316 1.3604 -0.0028 8 6 7.6125 1.6399 -0.0051 9 8 8.0135 2.7845 -0.0062 10 7 8.4912 0.6181 -0.0059 11 6 9.9308 0.8899 -0.0076 12 6 10.6995 -0.4330 -0.0076 13 6 12.2029 -0.1491 -0.0087 14 1 12.4849 0.6420 0.6861 15 6 13.0688 -1.4141 0.1140 16 6 14.0130 -0.7725 -0.9164 17 1 14.7898 -0.1518 -0.4697 18 8 14.5261 -1.6980 -1.8768 19 6 12.7975 0.0262 -1.4160 20 6 3.2972 3.6820 -0.0014 21 6 3.9775 5.0267 -0.0029 22 8 4.5024 5.2935 -1.3050 23 14 2.7444 6.3471 0.4520 24 6 1.9172 3.6065 -0.0005 25 6 1.2905 2.3752 -0.0001 26 1 -0.3634 -1.0277 0.0005 27 1 -0.3634 0.5138 0.8900 28 1 -0.3634 0.5138 -0.8899 29 1 4.0197 0.3791 -0.0099 30 1 5.8690 0.7875 -0.8921 31 1 5.8708 0.7886 0.8878 32 1 8.1705 -0.2974 -0.0046 33 1 10.1935 1.4623 0.8821 34 1 10.1914 1.4620 -0.8980 35 1 10.4369 -1.0059 -0.8970 36 1 10.4387 -1.0048 0.8830 37 1 12.5766 -2.3170 -0.2476 38 1 13.5192 -1.5428 1.0982 39 1 15.1021 -1.2962 -2.5415 40 1 13.0286 1.0615 -1.6666 41 1 12.2313 -0.4829 -2.1959 42 1 4.7906 5.0233 0.7229 43 1 3.8331 5.3116 -2.0028 44 1 3.4031 7.6780 0.4547 45 1 1.6147 6.3409 -0.5118 46 1 1.3278 4.5114 -0.0009 47 1 0.2121 2.3187 0.0002 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17837616_4974312.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:48:04 Heat of formation + Delta-G solvation = -138.716839 kcal Electronic energy + Delta-G solvation = -28658.156044 eV Core-core repulsion = 24388.364204 eV Total energy + Delta-G solvation = -4269.791839 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 338.165 amu Computer time = 1.05 seconds Orbital eigenvalues (eV) -41.84436 -40.95008 -40.35542 -39.80833 -38.39958 -37.05039 -36.80482 -35.66150 -32.38892 -32.14572 -31.22084 -29.28660 -28.35258 -26.71615 -26.13903 -25.56031 -23.62133 -22.62368 -22.50433 -21.69445 -20.45297 -19.97102 -18.70724 -18.40776 -18.09935 -17.81804 -17.61250 -17.26607 -16.81666 -16.74097 -16.51412 -16.39372 -16.18657 -15.91913 -15.47197 -15.38111 -15.17821 -15.11807 -14.65003 -14.50046 -14.17395 -13.76637 -13.49204 -13.40825 -13.35686 -13.32230 -13.14878 -12.72057 -12.51896 -12.43877 -12.30607 -12.04656 -11.98595 -11.68404 -11.66534 -11.63115 -11.20026 -11.05948 -10.67803 -10.51938 -10.25382 -9.71178 -9.11313 -4.93025 0.19227 0.29801 1.31458 1.39680 1.43263 1.55675 1.96136 2.24400 2.55008 2.57606 3.29138 3.48902 3.49541 3.53915 3.61977 3.71509 3.78398 3.79811 3.93239 3.98756 4.01191 4.05879 4.09044 4.16229 4.24755 4.34065 4.37441 4.40088 4.42367 4.45944 4.60317 4.65479 4.67132 4.78838 4.80284 4.83411 4.94085 5.00020 5.01640 5.11149 5.22708 5.25242 5.26849 5.30248 5.46569 5.48496 6.11833 6.34668 6.41899 6.56908 6.85580 7.07603 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.016 3.984 2 O -0.330 6.330 3 C 0.165 3.835 4 C -0.252 4.252 5 C 0.176 3.824 6 O -0.304 6.304 7 C 0.035 3.965 8 C 0.511 3.489 9 O -0.571 6.571 10 N -0.711 5.711 11 C 0.122 3.878 12 C -0.108 4.108 13 C -0.102 4.102 14 H 0.101 0.899 15 C -0.126 4.126 16 C 0.066 3.934 17 H 0.091 0.909 18 O -0.583 6.583 19 C -0.166 4.166 20 C -0.196 4.196 21 C -0.079 4.079 22 O -0.550 6.550 23 Si 0.782 3.218 24 C -0.041 4.041 25 C -0.237 4.237 26 H 0.116 0.884 27 H 0.071 0.929 28 H 0.067 0.933 29 H 0.153 0.847 30 H 0.119 0.881 31 H 0.126 0.874 32 H 0.421 0.579 33 H 0.060 0.940 34 H 0.054 0.946 35 H 0.079 0.921 36 H 0.088 0.912 37 H 0.085 0.915 38 H 0.080 0.920 39 H 0.393 0.607 40 H 0.070 0.930 41 H 0.084 0.916 42 H 0.097 0.903 43 H 0.381 0.619 44 H -0.308 1.308 45 H -0.262 1.262 46 H 0.156 0.844 47 H 0.158 0.842 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.610 -5.807 2.137 7.716 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 O -0.243 6.243 3 C 0.118 3.882 4 C -0.271 4.271 5 C 0.130 3.870 6 O -0.216 6.216 7 C -0.043 4.043 8 C 0.297 3.703 9 O -0.449 6.449 10 N -0.365 5.365 11 C -0.001 4.001 12 C -0.145 4.145 13 C -0.121 4.121 14 H 0.119 0.881 15 C -0.163 4.163 16 C 0.008 3.992 17 H 0.109 0.891 18 O -0.392 6.392 19 C -0.204 4.204 20 C -0.197 4.197 21 C -0.186 4.186 22 O -0.358 6.358 23 Si 0.686 3.314 24 C -0.058 4.058 25 C -0.256 4.256 26 H 0.135 0.865 27 H 0.089 0.911 28 H 0.085 0.915 29 H 0.171 0.829 30 H 0.137 0.863 31 H 0.143 0.857 32 H 0.258 0.742 33 H 0.079 0.921 34 H 0.073 0.927 35 H 0.097 0.903 36 H 0.107 0.893 37 H 0.103 0.897 38 H 0.098 0.902 39 H 0.243 0.757 40 H 0.089 0.911 41 H 0.102 0.898 42 H 0.115 0.885 43 H 0.230 0.770 44 H -0.237 1.237 45 H -0.188 1.188 46 H 0.173 0.827 47 H 0.175 0.825 Dipole moment (debyes) X Y Z Total from point charges -4.298 -4.724 2.566 6.883 hybrid contribution 0.524 -0.180 -1.657 1.747 sum -3.774 -4.904 0.908 6.254 Atomic orbital electron populations 1.23405 0.75990 1.05714 1.02698 1.86055 1.23766 1.26571 1.87922 1.18868 0.91638 0.84988 0.92664 1.20557 0.93436 0.97411 1.15730 1.18594 0.81696 0.93209 0.93500 1.86220 1.15563 1.31669 1.88121 1.22735 0.88376 0.86482 1.06659 1.20495 0.88627 0.85172 0.75998 1.90777 1.80830 1.23307 1.50006 1.45712 1.06387 1.09610 1.74812 1.21375 0.78521 0.98515 1.01676 1.21667 0.93303 0.95443 1.04105 1.22221 0.93826 0.98451 0.97581 0.88081 1.23123 0.96426 0.97961 0.98814 1.23507 0.93915 0.91274 0.90535 0.89102 1.86479 1.69456 1.38775 1.44447 1.23762 0.98246 1.00934 0.97467 1.19611 0.93531 0.93942 1.12598 1.25177 1.06322 0.99816 0.87304 1.86652 1.38567 1.93087 1.17451 0.94097 0.75439 0.73290 0.88580 1.20952 0.91979 0.98835 0.94076 1.21402 1.01621 0.91223 1.11346 0.86548 0.91079 0.91484 0.82909 0.86325 0.85689 0.74161 0.92137 0.92715 0.90258 0.89332 0.89658 0.90166 0.75740 0.91074 0.89763 0.88505 0.77020 1.23671 1.18770 0.82655 0.82483 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.10 9.81 113.37 1.11 1.01 16 2 O -0.33 -0.25 10.49 -92.37 -0.97 -1.22 16 3 C 0.16 0.29 6.68 22.49 0.15 0.44 16 4 C -0.25 -0.61 8.97 22.46 0.20 -0.40 16 5 C 0.18 1.05 6.66 22.49 0.15 1.20 16 6 O -0.30 -2.74 8.99 -73.27 -0.66 -3.40 16 7 C 0.04 0.01 5.22 71.24 0.37 0.39 16 8 C 0.51 2.90 7.91 87.66 0.69 3.59 16 9 O -0.57 -10.05 16.50 16.00 0.26 -9.79 16 10 N -0.71 1.46 5.56 -463.06 -2.57 -1.11 16 11 C 0.12 -0.09 5.67 86.38 0.49 0.40 16 12 C -0.11 0.61 5.17 30.59 0.16 0.76 16 13 C -0.10 0.40 3.65 -10.27 -0.04 0.36 16 14 H 0.10 -0.44 8.13 -2.39 -0.02 -0.46 16 15 C -0.13 0.27 7.47 31.12 0.23 0.50 16 16 C 0.07 -0.07 5.21 31.12 0.16 0.09 16 17 H 0.09 -0.30 8.14 -2.39 -0.02 -0.32 16 18 O -0.58 -1.13 13.67 -148.98 -2.04 -3.17 16 19 C -0.17 0.34 7.47 31.12 0.23 0.58 16 20 C -0.20 -0.91 5.27 -19.75 -0.10 -1.02 16 21 C -0.08 -0.51 2.37 71.24 0.17 -0.34 16 22 O -0.55 -5.76 12.88 -148.98 -1.92 -7.68 16 23 Si 0.78 0.69 30.25 68.60 2.07 2.76 16 24 C -0.04 0.00 8.65 22.24 0.19 0.19 16 25 C -0.24 0.22 9.04 22.38 0.20 0.42 16 26 H 0.12 -1.09 8.14 -2.38 -0.02 -1.11 16 27 H 0.07 -0.61 7.66 -2.39 -0.02 -0.63 16 28 H 0.07 -0.54 7.66 -2.39 -0.02 -0.56 16 29 H 0.15 -0.31 6.30 -2.91 -0.02 -0.33 16 30 H 0.12 -0.58 7.65 -2.39 -0.02 -0.60 16 31 H 0.13 -0.75 7.67 -2.39 -0.02 -0.77 16 32 H 0.42 -4.06 8.47 -92.71 -0.79 -4.85 16 33 H 0.06 0.11 8.14 -2.38 -0.02 0.09 16 34 H 0.05 0.16 8.14 -2.39 -0.02 0.14 16 35 H 0.08 -0.49 7.85 -2.39 -0.02 -0.51 16 36 H 0.09 -0.69 8.14 -2.38 -0.02 -0.71 16 37 H 0.08 -0.07 8.10 -2.38 -0.02 -0.09 16 38 H 0.08 -0.25 8.14 -2.39 -0.02 -0.27 16 39 H 0.39 -2.25 9.12 -74.06 -0.68 -2.93 16 40 H 0.07 -0.15 8.14 -2.39 -0.02 -0.17 16 41 H 0.08 -0.06 7.90 -2.39 -0.02 -0.08 16 42 H 0.10 0.94 7.82 -2.39 -0.02 0.92 16 43 H 0.38 1.10 8.70 -74.06 -0.64 0.45 16 44 H -0.31 -2.87 7.11 99.48 0.71 -2.16 16 45 H -0.26 -0.27 6.68 99.48 0.66 0.40 16 46 H 0.16 -0.66 4.85 -2.91 -0.01 -0.68 16 47 H 0.16 -0.97 6.29 -2.91 -0.02 -0.99 16 Total: 0.00 -29.12 388.52 -2.53 -31.66 By element: Atomic # 1 Polarization: -15.12 SS G_CDS: -1.09 Total: -16.21 kcal Atomic # 6 Polarization: 3.79 SS G_CDS: 4.38 Total: 8.16 kcal Atomic # 7 Polarization: 1.46 SS G_CDS: -2.57 Total: -1.11 kcal Atomic # 8 Polarization: -19.94 SS G_CDS: -5.32 Total: -25.26 kcal Atomic # 14 Polarization: 0.69 SS G_CDS: 2.07 Total: 2.76 kcal Total: -29.12 -2.53 -31.66 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17837616_4974312.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -107.062 kcal (2) G-P(sol) polarization free energy of solvation -29.124 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -136.186 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.531 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.655 kcal (6) G-S(sol) free energy of system = (1) + (5) -138.717 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.05 seconds