Wall clock time and date at job start Sun Mar 7 2021 10:48:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46506 * 1 3 3 C 1.37636 * 125.67606 * 2 1 4 4 C 1.46678 * 126.22834 * 0.02562 * 3 2 1 5 5 O 1.21700 * 119.99802 * 4.47943 * 4 3 2 6 6 N 1.34778 * 119.99846 * 184.47775 * 4 3 2 7 7 C 1.46497 * 119.99370 * 174.66331 * 6 4 3 8 8 C 1.53004 * 109.46722 * 179.97438 * 7 6 4 9 9 C 1.53001 * 109.47011 * 180.02562 * 8 7 6 10 10 H 1.09007 * 112.84845 * 316.19565 * 9 8 7 11 11 C 1.53779 * 113.69158 * 87.46663 * 9 8 7 12 12 C 1.53786 * 87.07884 * 139.99195 * 11 9 8 13 13 H 1.09001 * 113.68650 * 89.12781 * 12 11 9 14 14 O 1.42904 * 113.61149 * 220.01748 * 12 11 9 15 15 C 1.53777 * 87.08142 * 334.56883 * 12 11 9 16 16 C 1.37887 * 107.54865 * 179.75664 * 3 2 1 17 17 C 1.39881 * 107.09134 * 0.24009 * 16 3 2 18 18 Br 1.89099 * 126.07290 * 180.02562 * 17 16 3 19 19 C 1.35509 * 107.84904 * 359.97438 * 17 16 3 20 20 C 1.50702 * 125.56523 * 180.02562 * 19 17 16 21 21 O 1.42900 * 109.46470 * 210.02556 * 20 19 17 22 22 Si 1.86301 * 109.47174 * 330.02042 * 20 19 17 23 23 H 1.09000 * 109.47298 * 92.96897 * 1 2 3 24 24 H 1.08993 * 109.47623 * 212.97238 * 1 2 3 25 25 H 1.09003 * 109.46880 * 332.97228 * 1 2 3 26 26 H 0.96997 * 120.00354 * 354.66098 * 6 4 3 27 27 H 1.09008 * 109.47491 * 60.00053 * 7 6 4 28 28 H 1.08996 * 109.47342 * 299.99884 * 7 6 4 29 29 H 1.09002 * 109.47092 * 60.00643 * 8 7 6 30 30 H 1.08996 * 109.47506 * 300.00260 * 8 7 6 31 31 H 1.08993 * 113.61114 * 25.44657 * 11 9 8 32 32 H 1.08999 * 113.61445 * 254.53995 * 11 9 8 33 33 H 0.96697 * 114.00155 * 277.49745 * 14 12 11 34 34 H 1.09004 * 113.61465 * 139.98429 * 15 12 11 35 35 H 1.09000 * 113.61270 * 270.88073 * 15 12 11 36 36 H 1.08004 * 126.45501 * 180.19893 * 16 3 2 37 37 H 1.08989 * 109.47713 * 90.02486 * 20 19 17 38 38 H 0.96710 * 113.99845 * 180.02562 * 21 20 19 39 39 H 1.48502 * 109.99939 * 178.68351 * 22 20 19 40 40 H 1.48499 * 110.00503 * 300.00541 * 22 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 6 2.2678 1.1181 0.0000 4 6 1.8122 2.5123 0.0005 5 8 0.6244 2.7643 0.0833 6 7 2.7089 3.5143 -0.0907 7 6 2.2491 4.9003 -0.2080 8 6 3.4587 5.8333 -0.2942 9 6 2.9785 7.2808 -0.4161 10 1 2.1538 7.3954 -1.1197 11 6 2.7325 7.9664 0.9383 12 6 3.3612 9.2286 0.3246 13 1 2.6422 9.8766 -0.1766 14 8 4.2149 9.9382 1.2245 15 6 4.1172 8.2915 -0.6320 16 6 3.5782 0.6891 0.0056 17 6 3.5529 -0.7095 0.0034 18 35 5.0609 -1.8504 0.0095 19 6 2.2557 -1.1015 -0.0028 20 6 1.7713 -2.5285 -0.0065 21 8 0.5166 -2.6037 -0.6864 22 14 3.0162 -3.6047 -0.8799 23 1 -0.3634 -0.0532 -1.0263 24 1 -0.3634 -0.8621 0.5592 25 1 -0.3633 0.9155 0.4670 26 1 3.6587 3.3178 -0.0786 27 1 1.6517 5.1602 0.6660 28 1 1.6426 5.0070 -1.1073 29 1 4.0563 5.5736 -1.1680 30 1 4.0648 5.7265 0.6053 31 1 3.3156 7.5412 1.7551 32 1 1.6768 8.0801 1.1848 33 1 3.7451 10.5293 1.8287 34 1 4.1795 8.6676 -1.6532 35 1 5.0789 7.9552 -0.2444 36 1 4.4583 1.3150 0.0101 37 1 1.6495 -2.8736 1.0201 38 1 0.1440 -3.4952 -0.7269 39 1 2.5654 -5.0195 -0.8625 40 1 3.1914 -3.1446 -2.2809 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17837616_5000100.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:48:07 Heat of formation + Delta-G solvation = -51.637174 kcal Electronic energy + Delta-G solvation = -23674.716275 eV Core-core repulsion = 19924.584724 eV Total energy + Delta-G solvation = -3750.131552 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.057 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -42.87924 -40.64395 -40.10771 -37.94520 -36.86418 -35.74222 -34.58116 -32.87603 -31.64115 -30.93543 -27.43729 -27.31371 -26.66261 -25.22913 -23.17476 -22.61596 -21.55958 -20.53506 -20.36556 -18.94270 -18.59774 -18.34376 -17.39605 -17.09981 -16.87934 -16.54291 -16.28051 -15.81953 -15.36932 -15.24941 -15.11816 -14.76481 -14.61956 -14.29465 -14.11839 -14.03224 -13.84393 -13.37652 -13.31624 -13.17539 -12.96377 -12.78783 -12.67738 -12.45516 -12.03613 -11.94878 -11.65154 -11.58704 -11.24981 -11.11344 -10.83177 -10.65203 -10.27061 -9.89025 -9.31622 -4.69422 0.13984 0.32941 0.88012 1.24050 1.41003 1.56851 1.94164 2.12201 2.27340 2.92031 3.32578 3.45044 3.52443 3.56802 3.65611 3.77717 3.82151 4.02328 4.11648 4.14548 4.19858 4.27869 4.29824 4.38567 4.40625 4.60522 4.62139 4.63818 4.71307 4.84180 4.86899 4.97585 5.03547 5.14779 5.22464 5.28637 5.34684 5.52086 5.59689 5.77389 6.37672 6.42402 6.88832 7.02002 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.077 3.923 2 N -0.391 5.391 3 C -0.063 4.063 4 C 0.588 3.412 5 O -0.580 6.580 6 N -0.703 5.703 7 C 0.125 3.875 8 C -0.110 4.110 9 C -0.100 4.100 10 H 0.102 0.898 11 C -0.165 4.165 12 C 0.066 3.934 13 H 0.091 0.909 14 O -0.584 6.584 15 C -0.127 4.127 16 C -0.089 4.089 17 C -0.196 4.196 18 Br 0.094 6.906 19 C 0.095 3.905 20 C -0.044 4.044 21 O -0.557 6.557 22 Si 0.621 3.379 23 H 0.074 0.926 24 H 0.103 0.897 25 H 0.094 0.906 26 H 0.418 0.582 27 H 0.061 0.939 28 H 0.063 0.937 29 H 0.086 0.914 30 H 0.080 0.920 31 H 0.084 0.916 32 H 0.072 0.928 33 H 0.393 0.607 34 H 0.078 0.922 35 H 0.084 0.916 36 H 0.191 0.809 37 H 0.112 0.888 38 H 0.403 0.597 39 H -0.252 1.252 40 H -0.296 1.296 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.699 0.768 2.067 3.486 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.064 4.064 2 N -0.063 5.063 3 C -0.176 4.176 4 C 0.376 3.624 5 O -0.462 6.462 6 N -0.355 5.355 7 C 0.002 3.998 8 C -0.147 4.147 9 C -0.119 4.119 10 H 0.120 0.880 11 C -0.202 4.202 12 C 0.007 3.993 13 H 0.109 0.891 14 O -0.392 6.392 15 C -0.165 4.165 16 C -0.115 4.115 17 C -0.281 4.281 18 Br 0.178 6.822 19 C -0.028 4.028 20 C -0.154 4.154 21 O -0.368 6.368 22 Si 0.523 3.477 23 H 0.093 0.907 24 H 0.121 0.879 25 H 0.112 0.888 26 H 0.256 0.744 27 H 0.079 0.921 28 H 0.081 0.919 29 H 0.105 0.895 30 H 0.098 0.902 31 H 0.103 0.897 32 H 0.091 0.909 33 H 0.242 0.758 34 H 0.097 0.903 35 H 0.103 0.897 36 H 0.208 0.792 37 H 0.129 0.871 38 H 0.254 0.746 39 H -0.177 1.177 40 H -0.223 1.223 Dipole moment (debyes) X Y Z Total from point charges 2.698 0.360 1.073 2.926 hybrid contribution -1.891 0.032 -0.042 1.892 sum 0.807 0.392 1.031 1.367 Atomic orbital electron populations 1.22336 0.74372 1.05386 1.04258 1.43928 1.07859 1.04014 1.50497 1.20194 0.90472 0.87773 1.19179 1.16993 0.85458 0.83849 0.76049 1.90791 1.17763 1.85171 1.52433 1.45548 1.10266 1.06051 1.73588 1.21416 0.97707 0.78846 1.01834 1.21682 0.96398 0.92639 1.04009 1.22207 0.98794 0.93042 0.97881 0.88006 1.23750 1.01562 0.97338 0.97582 1.23513 0.92903 0.91347 0.91516 0.89097 1.86485 1.38355 1.62203 1.52142 1.23134 0.98558 0.95403 0.99387 1.21514 0.95585 0.92443 1.01978 1.20626 0.90371 0.95089 1.22005 1.96296 1.32411 1.56198 1.97299 1.20064 0.89402 0.88518 1.04799 1.24329 0.93695 0.94532 1.02855 1.86455 1.34641 1.36439 1.79229 0.92913 0.93482 0.77959 0.83313 0.90749 0.87850 0.88753 0.74403 0.92066 0.91880 0.89511 0.90183 0.89742 0.90924 0.75758 0.90303 0.89700 0.79167 0.87081 0.74562 1.17667 1.22297 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 0.37 9.39 127.77 1.20 1.57 16 2 N -0.39 -2.40 3.16 -519.60 -1.64 -4.04 16 3 C -0.06 -0.29 6.89 40.35 0.28 -0.01 16 4 C 0.59 3.33 7.77 86.45 0.67 4.01 16 5 O -0.58 -7.38 14.60 -4.35 -0.06 -7.44 16 6 N -0.70 1.14 5.54 -467.07 -2.59 -1.45 16 7 C 0.13 -0.27 5.67 86.38 0.49 0.22 16 8 C -0.11 0.70 5.17 30.60 0.16 0.86 16 9 C -0.10 0.50 3.65 -10.27 -0.04 0.46 16 10 H 0.10 -0.58 8.13 -2.38 -0.02 -0.60 16 11 C -0.16 0.54 7.47 31.12 0.23 0.77 16 12 C 0.07 -0.13 5.21 31.12 0.16 0.04 16 13 H 0.09 -0.38 8.14 -2.39 -0.02 -0.40 16 14 O -0.58 -0.73 13.67 -148.98 -2.04 -2.76 16 15 C -0.13 0.35 7.47 31.12 0.23 0.58 16 16 C -0.09 0.02 10.34 22.58 0.23 0.25 16 17 C -0.20 -0.36 6.15 22.04 0.14 -0.23 16 18 Br 0.09 -0.17 28.25 -20.37 -0.58 -0.74 16 19 C 0.10 0.41 6.18 41.35 0.26 0.66 16 20 C -0.04 -0.04 2.88 71.24 0.21 0.16 16 21 O -0.56 -0.64 10.45 -148.98 -1.56 -2.19 16 22 Si 0.62 1.71 27.10 68.60 1.86 3.57 16 23 H 0.07 0.42 8.14 -2.39 -0.02 0.40 16 24 H 0.10 0.17 7.02 -2.39 -0.02 0.15 16 25 H 0.09 0.67 6.07 -2.39 -0.01 0.66 16 26 H 0.42 -3.23 7.37 -92.71 -0.68 -3.91 16 27 H 0.06 0.03 8.14 -2.38 -0.02 0.02 16 28 H 0.06 -0.01 8.14 -2.39 -0.02 -0.03 16 29 H 0.09 -0.70 8.14 -2.39 -0.02 -0.72 16 30 H 0.08 -0.55 7.85 -2.39 -0.02 -0.57 16 31 H 0.08 -0.15 7.90 -2.39 -0.02 -0.17 16 32 H 0.07 -0.27 8.14 -2.39 -0.02 -0.29 16 33 H 0.39 -2.54 9.12 -74.06 -0.68 -3.22 16 34 H 0.08 -0.28 8.14 -2.39 -0.02 -0.30 16 35 H 0.08 -0.10 8.10 -2.39 -0.02 -0.12 16 36 H 0.19 -1.50 7.45 -2.91 -0.02 -1.52 16 37 H 0.11 -0.41 7.96 -2.39 -0.02 -0.43 16 38 H 0.40 -2.71 8.74 -74.05 -0.65 -3.36 16 39 H -0.25 -1.29 7.11 99.48 0.71 -0.59 16 40 H -0.30 -3.40 7.11 99.48 0.71 -2.70 16 Total: 0.00 -20.15 343.92 -3.26 -23.41 By element: Atomic # 1 Polarization: -16.82 SS G_CDS: -0.88 Total: -17.70 kcal Atomic # 6 Polarization: 5.13 SS G_CDS: 4.22 Total: 9.34 kcal Atomic # 7 Polarization: -1.26 SS G_CDS: -4.23 Total: -5.49 kcal Atomic # 8 Polarization: -8.74 SS G_CDS: -3.66 Total: -12.40 kcal Atomic # 14 Polarization: 1.71 SS G_CDS: 1.86 Total: 3.57 kcal Atomic # 35 Polarization: -0.17 SS G_CDS: -0.58 Total: -0.74 kcal Total: -20.15 -3.26 -23.41 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17837616_5000100.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -28.224 kcal (2) G-P(sol) polarization free energy of solvation -20.149 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -48.373 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.264 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.413 kcal (6) G-S(sol) free energy of system = (1) + (5) -51.637 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds