Wall clock time and date at job start Sun Mar 7 2021 10:48:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86300 * 109.46693 * 2 1 4 4 C 1.50700 * 109.47593 * 119.99796 * 2 1 3 5 5 C 1.34238 * 126.50193 * 255.03199 * 4 2 1 6 6 N 1.36828 * 109.93756 * 179.97438 * 5 4 2 7 7 C 1.46508 * 125.06276 * 179.97438 * 6 5 4 8 8 C 1.50695 * 109.47185 * 265.02930 * 7 6 5 9 9 O 1.21284 * 120.00369 * 0.02562 * 8 7 6 10 10 N 1.34778 * 120.00023 * 179.97438 * 8 7 6 11 11 C 1.46496 * 120.00483 * 179.97438 * 10 8 7 12 12 C 1.52994 * 109.47512 * 180.02562 * 11 10 8 13 13 C 1.53000 * 109.47265 * 180.02562 * 12 11 10 14 14 H 1.09002 * 112.84949 * 45.33448 * 13 12 11 15 15 C 1.53781 * 113.61707 * 176.53008 * 13 12 11 16 16 C 1.53777 * 87.08336 * 140.06298 * 15 13 12 17 17 H 1.09008 * 113.61204 * 89.11878 * 16 15 13 18 18 O 1.42896 * 113.61697 * 219.93327 * 16 15 13 19 19 C 1.53775 * 87.07992 * 334.56762 * 16 15 13 20 20 C 1.37689 * 109.87776 * 0.23155 * 6 5 4 21 21 C 1.39085 * 133.51138 * 180.39687 * 20 6 5 22 22 C 1.37791 * 119.77679 * 179.64259 * 21 20 6 23 23 C 1.38786 * 120.66718 * 359.75966 * 22 21 20 24 24 C 1.36662 * 120.52873 * 359.97438 * 23 22 21 25 25 C 1.39588 * 119.76641 * 0.02562 * 24 23 22 26 26 H 0.96702 * 114.00569 * 299.99592 * 1 2 3 27 27 H 1.08998 * 109.47331 * 240.00637 * 2 1 3 28 28 H 1.48500 * 110.00177 * 178.68257 * 3 2 1 29 29 H 1.48500 * 110.00310 * 299.99751 * 3 2 1 30 30 H 1.08005 * 125.02894 * 359.97438 * 5 4 2 31 31 H 1.08999 * 109.46899 * 145.02418 * 7 6 5 32 32 H 1.09002 * 109.46493 * 25.02821 * 7 6 5 33 33 H 0.97006 * 119.99677 * 0.02562 * 10 8 7 34 34 H 1.08998 * 109.47019 * 59.99805 * 11 10 8 35 35 H 1.09005 * 109.46951 * 300.00722 * 11 10 8 36 36 H 1.09001 * 109.46833 * 60.00192 * 12 11 10 37 37 H 1.08992 * 109.47090 * 300.00265 * 12 11 10 38 38 H 1.08997 * 113.61673 * 254.61847 * 15 13 12 39 39 H 1.09005 * 113.61396 * 25.51675 * 15 13 12 40 40 H 0.96694 * 114.00132 * 179.97438 * 18 16 15 41 41 H 1.08993 * 113.61636 * 270.87622 * 19 16 15 42 42 H 1.09008 * 113.61006 * 139.97865 * 19 16 15 43 43 H 1.08002 * 120.11225 * 359.39622 * 21 20 6 44 44 H 1.08003 * 119.66646 * 179.77320 * 22 21 20 45 45 H 1.08000 * 119.73918 * 180.02562 * 23 22 21 46 46 H 1.08003 * 120.11877 * 179.97438 * 24 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0498 1.7565 0.0000 4 6 1.9314 -0.7103 1.2304 5 6 2.4604 -0.1375 2.3231 6 7 2.8021 -1.0988 3.2349 7 6 3.4069 -0.8401 4.5440 8 6 4.9052 -0.9621 4.4382 9 8 5.4176 -1.2374 3.3739 10 7 5.6759 -0.7641 5.5259 11 6 7.1324 -0.8832 5.4232 12 6 7.7639 -0.6129 6.7903 13 6 9.2851 -0.7366 6.6829 14 1 9.6904 -0.2282 5.8080 15 6 10.0244 -0.3998 7.9886 16 6 10.9597 -1.5783 7.6709 17 1 11.8229 -1.2999 7.0662 18 8 11.3128 -2.3542 8.8178 19 6 9.8017 -2.1750 6.8538 20 6 2.4984 -2.3458 2.7365 21 6 2.6291 -3.6360 3.2394 22 6 2.2161 -4.7106 2.4823 23 6 1.6653 -4.5194 1.2229 24 6 1.5226 -3.2601 0.7116 25 6 1.9343 -2.1569 1.4613 26 1 -0.3934 0.4416 0.7651 27 1 1.7923 -0.5137 -0.8900 28 1 3.5344 1.7705 0.0321 29 1 1.5613 2.4679 -1.2085 30 1 2.5961 0.9250 2.4620 31 1 3.0334 -1.5658 5.2665 32 1 3.1465 0.1662 4.8720 33 1 5.2661 -0.5435 6.3771 34 1 7.5061 -0.1581 4.7003 35 1 7.3925 -1.8898 5.0958 36 1 7.3902 -1.3384 7.5129 37 1 7.5039 0.3935 7.1181 38 1 10.5221 0.5698 7.9710 39 1 9.4206 -0.5505 8.8836 40 1 11.9007 -3.0971 8.6242 41 1 9.1371 -2.8110 7.4384 42 1 10.1197 -2.6386 5.9199 43 1 3.0566 -3.7952 4.2183 44 1 2.3218 -5.7119 2.8731 45 1 1.3462 -5.3724 0.6425 46 1 1.0935 -3.1189 -0.2695 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17837616_9818708.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:48:38 Heat of formation + Delta-G solvation = -26.046804 kcal Electronic energy + Delta-G solvation = -27577.906352 eV Core-core repulsion = 23628.486444 eV Total energy + Delta-G solvation = -3949.419908 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.162 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -42.47066 -40.84904 -40.31234 -37.99888 -37.57147 -36.86678 -35.68533 -34.06977 -32.09847 -31.11609 -30.11304 -28.90364 -26.87179 -26.18556 -25.14423 -23.60118 -22.82135 -22.54986 -21.68885 -20.62318 -20.55681 -18.75153 -18.50750 -18.29859 -17.69511 -17.33840 -16.83329 -16.77158 -16.32527 -16.31058 -15.93107 -15.62275 -15.50829 -15.30073 -15.24142 -14.69574 -14.59270 -14.33276 -14.31086 -13.91098 -13.63927 -13.54266 -13.48065 -13.32128 -12.82652 -12.61524 -12.57523 -12.45484 -12.15278 -12.10935 -12.00466 -11.83743 -11.67066 -11.35695 -11.11371 -10.80046 -10.41502 -10.27318 -10.21649 -9.01866 -8.52258 -5.02117 0.28239 0.79904 1.38587 1.39811 1.44900 1.67181 1.78902 2.07265 2.11911 3.10510 3.13545 3.32583 3.44050 3.47746 3.49634 3.62442 3.65711 3.75854 3.81956 3.82715 3.86335 3.93125 4.07406 4.10190 4.18919 4.31683 4.37524 4.40198 4.52007 4.58762 4.67223 4.68495 4.71827 4.77684 4.80169 4.83373 4.90800 4.93805 4.99068 5.09012 5.20609 5.25904 5.30341 5.64981 5.81248 5.86737 5.90392 6.14836 6.31607 6.37179 6.62567 6.76468 7.00086 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.028 4.028 3 Si 0.682 3.318 4 C -0.198 4.198 5 C 0.069 3.931 6 N -0.466 5.466 7 C 0.092 3.908 8 C 0.489 3.511 9 O -0.515 6.515 10 N -0.730 5.730 11 C 0.120 3.880 12 C -0.118 4.118 13 C -0.107 4.107 14 H 0.096 0.904 15 C -0.124 4.124 16 C 0.074 3.926 17 H 0.082 0.918 18 O -0.561 6.561 19 C -0.167 4.167 20 C 0.109 3.891 21 C -0.128 4.128 22 C -0.097 4.097 23 C -0.146 4.146 24 C -0.066 4.066 25 C -0.087 4.087 26 H 0.376 0.624 27 H 0.111 0.889 28 H -0.256 1.256 29 H -0.255 1.255 30 H 0.171 0.829 31 H 0.118 0.882 32 H 0.124 0.876 33 H 0.402 0.598 34 H 0.069 0.931 35 H 0.069 0.931 36 H 0.073 0.927 37 H 0.074 0.926 38 H 0.075 0.925 39 H 0.091 0.909 40 H 0.379 0.621 41 H 0.090 0.910 42 H 0.070 0.930 43 H 0.114 0.886 44 H 0.125 0.875 45 H 0.123 0.877 46 H 0.122 0.878 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.374 2.561 6.629 7.117 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.140 4.140 3 Si 0.584 3.416 4 C -0.205 4.205 5 C -0.056 4.056 6 N -0.149 5.149 7 C -0.034 4.034 8 C 0.272 3.728 9 O -0.388 6.388 10 N -0.383 5.383 11 C -0.003 4.003 12 C -0.156 4.156 13 C -0.126 4.126 14 H 0.115 0.885 15 C -0.162 4.162 16 C 0.015 3.985 17 H 0.100 0.900 18 O -0.367 6.367 19 C -0.204 4.204 20 C 0.004 3.996 21 C -0.149 4.149 22 C -0.116 4.116 23 C -0.165 4.165 24 C -0.084 4.084 25 C -0.091 4.091 26 H 0.223 0.777 27 H 0.128 0.872 28 H -0.181 1.181 29 H -0.179 1.179 30 H 0.188 0.812 31 H 0.136 0.864 32 H 0.142 0.858 33 H 0.237 0.763 34 H 0.087 0.913 35 H 0.087 0.913 36 H 0.092 0.908 37 H 0.093 0.907 38 H 0.094 0.906 39 H 0.110 0.890 40 H 0.227 0.773 41 H 0.109 0.891 42 H 0.089 0.911 43 H 0.132 0.868 44 H 0.143 0.857 45 H 0.141 0.859 46 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges 1.087 3.175 5.440 6.392 hybrid contribution 0.510 -0.935 0.063 1.067 sum 1.597 2.240 5.504 6.153 Atomic orbital electron populations 1.86500 1.17515 1.81771 1.48907 1.24325 0.84621 1.08744 0.96292 0.95414 0.80973 0.77554 0.87678 1.20632 1.10100 0.92384 0.97428 1.21506 1.00935 0.93851 0.89291 1.43213 1.52605 1.04643 1.14484 1.21593 0.90676 1.05930 0.85238 1.21041 0.89592 0.77678 0.84455 1.90822 1.74668 1.45574 1.27781 1.45974 1.07629 1.72612 1.12102 1.21392 0.78594 1.02480 0.97844 1.21737 0.94723 1.02831 0.96312 1.22239 0.94164 0.97492 0.98722 0.88527 1.23117 0.97412 0.97592 0.98032 1.23338 0.95151 0.92772 0.87277 0.90020 1.86525 1.70629 1.45790 1.33716 1.23787 0.99114 0.96682 1.00864 1.18166 1.01214 0.85860 0.94320 1.19956 1.05010 0.89280 1.00607 1.20824 0.98373 0.97929 0.94480 1.20669 1.02462 0.96932 0.96423 1.20308 0.98022 0.90954 0.99151 1.18948 1.03307 0.92824 0.94022 0.77717 0.87188 1.18086 1.17917 0.81204 0.86408 0.85794 0.76342 0.91276 0.91256 0.90830 0.90736 0.90642 0.89007 0.77304 0.89123 0.91121 0.86756 0.85731 0.85934 0.85976 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.92 12.88 -35.23 -0.45 -1.37 16 2 C -0.03 -0.05 3.06 36.01 0.11 0.06 16 3 Si 0.68 -0.06 30.75 -169.99 -5.23 -5.29 16 4 C -0.20 -0.51 5.57 -102.71 -0.57 -1.08 16 5 C 0.07 0.05 9.89 -16.73 -0.17 -0.11 16 6 N -0.47 -0.60 2.27 -115.70 -0.26 -0.86 16 7 C 0.09 -0.23 6.48 -5.19 -0.03 -0.27 16 8 C 0.49 0.11 7.90 -10.99 -0.09 0.03 16 9 O -0.51 -2.94 16.42 5.55 0.09 -2.85 16 10 N -0.73 1.92 5.56 -60.30 -0.33 1.59 16 11 C 0.12 -0.20 5.67 -4.05 -0.02 -0.22 16 12 C -0.12 0.40 5.16 -26.73 -0.14 0.27 16 13 C -0.11 0.27 3.64 -89.81 -0.33 -0.06 16 14 H 0.10 -0.26 8.14 -51.93 -0.42 -0.68 16 15 C -0.12 0.19 7.47 -25.92 -0.19 0.00 16 16 C 0.07 -0.08 5.21 -25.92 -0.14 -0.21 16 17 H 0.08 -0.17 8.14 -51.92 -0.42 -0.59 16 18 O -0.56 -0.21 13.67 -35.23 -0.48 -0.70 16 19 C -0.17 0.29 7.47 -25.92 -0.19 0.09 16 20 C 0.11 0.40 6.80 -83.99 -0.57 -0.17 16 21 C -0.13 -0.36 10.00 -39.43 -0.39 -0.76 16 22 C -0.10 -0.24 10.01 -39.54 -0.40 -0.64 16 23 C -0.15 -0.43 9.97 -39.95 -0.40 -0.83 16 24 C -0.07 -0.27 10.05 -39.65 -0.40 -0.66 16 25 C -0.09 -0.39 6.35 -105.14 -0.67 -1.06 16 26 H 0.38 -0.92 8.70 45.56 0.40 -0.53 16 27 H 0.11 0.29 7.96 -51.93 -0.41 -0.12 16 28 H -0.26 -0.77 7.11 56.52 0.40 -0.37 16 29 H -0.25 -0.77 7.11 56.52 0.40 -0.37 16 30 H 0.17 -0.49 6.35 -52.48 -0.33 -0.82 16 31 H 0.12 -0.55 8.14 -51.93 -0.42 -0.97 16 32 H 0.12 -0.76 8.12 -51.93 -0.42 -1.18 16 33 H 0.40 -2.37 8.47 -40.82 -0.35 -2.72 16 34 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 35 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 36 H 0.07 -0.26 7.88 -51.93 -0.41 -0.67 16 37 H 0.07 -0.30 8.14 -51.93 -0.42 -0.73 16 38 H 0.07 -0.14 8.14 -51.93 -0.42 -0.57 16 39 H 0.09 -0.08 8.10 -51.93 -0.42 -0.50 16 40 H 0.38 -1.32 9.12 45.56 0.42 -0.90 16 41 H 0.09 -0.10 7.92 -51.93 -0.41 -0.51 16 42 H 0.07 -0.13 8.14 -51.92 -0.42 -0.55 16 43 H 0.11 0.10 8.06 -52.49 -0.42 -0.33 16 44 H 0.12 0.03 8.06 -52.48 -0.42 -0.39 16 45 H 0.12 0.12 8.06 -52.49 -0.42 -0.30 16 46 H 0.12 0.38 8.06 -52.48 -0.42 -0.04 16 LS Contribution 386.44 15.07 5.82 5.82 Total: 0.00 -12.35 386.44 -11.64 -23.99 By element: Atomic # 1 Polarization: -8.50 SS G_CDS: -6.21 Total: -14.71 kcal Atomic # 6 Polarization: -1.04 SS G_CDS: -4.58 Total: -5.63 kcal Atomic # 7 Polarization: 1.32 SS G_CDS: -0.60 Total: 0.73 kcal Atomic # 8 Polarization: -4.07 SS G_CDS: -0.84 Total: -4.92 kcal Atomic # 14 Polarization: -0.06 SS G_CDS: -5.23 Total: -5.29 kcal Total LS contribution 5.82 Total: 5.82 kcal Total: -12.35 -11.64 -23.99 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17837616_9818708.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -2.053 kcal (2) G-P(sol) polarization free energy of solvation -12.350 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -14.403 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.644 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.994 kcal (6) G-S(sol) free energy of system = (1) + (5) -26.047 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds