Wall clock time and date at job start Sun Mar 7 2021 10:48:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86300 * 109.46693 * 2 1 4 4 C 1.50700 * 109.47593 * 119.99796 * 2 1 3 5 5 C 1.34238 * 126.50193 * 255.03199 * 4 2 1 6 6 N 1.36828 * 109.93756 * 179.97438 * 5 4 2 7 7 C 1.46508 * 125.06276 * 179.97438 * 6 5 4 8 8 C 1.50695 * 109.47185 * 265.02930 * 7 6 5 9 9 O 1.21284 * 120.00369 * 0.02562 * 8 7 6 10 10 N 1.34778 * 120.00023 * 179.97438 * 8 7 6 11 11 C 1.46496 * 120.00483 * 179.97438 * 10 8 7 12 12 C 1.52994 * 109.47512 * 180.02562 * 11 10 8 13 13 C 1.53000 * 109.47265 * 180.02562 * 12 11 10 14 14 H 1.09002 * 112.84949 * 45.33448 * 13 12 11 15 15 C 1.53781 * 113.61707 * 176.53008 * 13 12 11 16 16 C 1.53777 * 87.08336 * 140.06298 * 15 13 12 17 17 H 1.09008 * 113.61204 * 89.11878 * 16 15 13 18 18 O 1.42896 * 113.61697 * 219.93327 * 16 15 13 19 19 C 1.53775 * 87.07992 * 334.56762 * 16 15 13 20 20 C 1.37689 * 109.87776 * 0.23155 * 6 5 4 21 21 C 1.39085 * 133.51138 * 180.39687 * 20 6 5 22 22 C 1.37791 * 119.77679 * 179.64259 * 21 20 6 23 23 C 1.38786 * 120.66718 * 359.75966 * 22 21 20 24 24 C 1.36662 * 120.52873 * 359.97438 * 23 22 21 25 25 C 1.39588 * 119.76641 * 0.02562 * 24 23 22 26 26 H 0.96702 * 114.00569 * 299.99592 * 1 2 3 27 27 H 1.08998 * 109.47331 * 240.00637 * 2 1 3 28 28 H 1.48500 * 110.00177 * 178.68257 * 3 2 1 29 29 H 1.48500 * 110.00310 * 299.99751 * 3 2 1 30 30 H 1.08005 * 125.02894 * 359.97438 * 5 4 2 31 31 H 1.08999 * 109.46899 * 145.02418 * 7 6 5 32 32 H 1.09002 * 109.46493 * 25.02821 * 7 6 5 33 33 H 0.97006 * 119.99677 * 0.02562 * 10 8 7 34 34 H 1.08998 * 109.47019 * 59.99805 * 11 10 8 35 35 H 1.09005 * 109.46951 * 300.00722 * 11 10 8 36 36 H 1.09001 * 109.46833 * 60.00192 * 12 11 10 37 37 H 1.08992 * 109.47090 * 300.00265 * 12 11 10 38 38 H 1.08997 * 113.61673 * 254.61847 * 15 13 12 39 39 H 1.09005 * 113.61396 * 25.51675 * 15 13 12 40 40 H 0.96694 * 114.00132 * 179.97438 * 18 16 15 41 41 H 1.08993 * 113.61636 * 270.87622 * 19 16 15 42 42 H 1.09008 * 113.61006 * 139.97865 * 19 16 15 43 43 H 1.08002 * 120.11225 * 359.39622 * 21 20 6 44 44 H 1.08003 * 119.66646 * 179.77320 * 22 21 20 45 45 H 1.08000 * 119.73918 * 180.02562 * 23 22 21 46 46 H 1.08003 * 120.11877 * 179.97438 * 24 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0498 1.7565 0.0000 4 6 1.9314 -0.7103 1.2304 5 6 2.4604 -0.1375 2.3231 6 7 2.8021 -1.0988 3.2349 7 6 3.4069 -0.8401 4.5440 8 6 4.9052 -0.9621 4.4382 9 8 5.4176 -1.2374 3.3739 10 7 5.6759 -0.7641 5.5259 11 6 7.1324 -0.8832 5.4232 12 6 7.7639 -0.6129 6.7903 13 6 9.2851 -0.7366 6.6829 14 1 9.6904 -0.2282 5.8080 15 6 10.0244 -0.3998 7.9886 16 6 10.9597 -1.5783 7.6709 17 1 11.8229 -1.2999 7.0662 18 8 11.3128 -2.3542 8.8178 19 6 9.8017 -2.1750 6.8538 20 6 2.4984 -2.3458 2.7365 21 6 2.6291 -3.6360 3.2394 22 6 2.2161 -4.7106 2.4823 23 6 1.6653 -4.5194 1.2229 24 6 1.5226 -3.2601 0.7116 25 6 1.9343 -2.1569 1.4613 26 1 -0.3934 0.4416 0.7651 27 1 1.7923 -0.5137 -0.8900 28 1 3.5344 1.7705 0.0321 29 1 1.5613 2.4679 -1.2085 30 1 2.5961 0.9250 2.4620 31 1 3.0334 -1.5658 5.2665 32 1 3.1465 0.1662 4.8720 33 1 5.2661 -0.5435 6.3771 34 1 7.5061 -0.1581 4.7003 35 1 7.3925 -1.8898 5.0958 36 1 7.3902 -1.3384 7.5129 37 1 7.5039 0.3935 7.1181 38 1 10.5221 0.5698 7.9710 39 1 9.4206 -0.5505 8.8836 40 1 11.9007 -3.0971 8.6242 41 1 9.1371 -2.8110 7.4384 42 1 10.1197 -2.6386 5.9199 43 1 3.0566 -3.7952 4.2183 44 1 2.3218 -5.7119 2.8731 45 1 1.3462 -5.3724 0.6425 46 1 1.0935 -3.1189 -0.2695 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17837616_9818708.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:48:37 Heat of formation + Delta-G solvation = -30.185400 kcal Electronic energy + Delta-G solvation = -27578.085815 eV Core-core repulsion = 23628.486444 eV Total energy + Delta-G solvation = -3949.599371 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.162 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -42.53381 -40.79830 -40.24437 -38.11666 -37.64435 -36.82059 -35.64513 -34.10022 -32.06107 -31.15256 -30.24102 -28.88279 -26.73680 -26.18074 -25.10327 -23.72606 -22.76272 -22.56114 -21.66490 -20.66666 -20.45476 -18.70868 -18.52364 -18.21951 -17.75272 -17.33837 -16.76952 -16.71526 -16.44199 -16.25161 -16.00986 -15.54942 -15.45516 -15.30384 -15.28224 -14.80348 -14.71151 -14.39435 -14.23045 -14.05967 -13.65845 -13.42000 -13.34837 -13.16998 -12.72540 -12.70171 -12.59409 -12.47804 -12.26813 -12.13155 -11.98887 -11.83016 -11.69324 -11.23759 -11.12756 -10.70146 -10.55648 -10.31255 -10.21160 -9.16987 -8.63622 -5.05764 0.12906 0.61840 1.33901 1.42428 1.45662 1.64164 1.75409 1.99624 2.21891 2.93187 3.29189 3.49620 3.58533 3.61379 3.66630 3.68912 3.75167 3.78695 3.87375 3.98175 4.03689 4.09684 4.16769 4.20077 4.24402 4.29418 4.37172 4.47523 4.55101 4.59258 4.67224 4.70431 4.77347 4.79544 4.82488 4.87168 4.93790 4.99990 5.11485 5.11866 5.25257 5.34317 5.47591 5.48899 5.64308 5.71935 5.74220 6.19178 6.22514 6.47452 6.84715 6.89059 7.13285 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.560 6.560 2 C -0.041 4.041 3 Si 0.803 3.197 4 C -0.226 4.226 5 C 0.080 3.920 6 N -0.467 5.467 7 C 0.089 3.911 8 C 0.487 3.513 9 O -0.578 6.578 10 N -0.712 5.712 11 C 0.123 3.877 12 C -0.107 4.107 13 C -0.102 4.102 14 H 0.099 0.901 15 C -0.125 4.125 16 C 0.066 3.934 17 H 0.090 0.910 18 O -0.583 6.583 19 C -0.166 4.166 20 C 0.090 3.910 21 C -0.134 4.134 22 C -0.109 4.109 23 C -0.154 4.154 24 C -0.091 4.091 25 C -0.118 4.118 26 H 0.394 0.606 27 H 0.087 0.913 28 H -0.295 1.295 29 H -0.298 1.298 30 H 0.209 0.791 31 H 0.144 0.856 32 H 0.170 0.830 33 H 0.422 0.578 34 H 0.056 0.944 35 H 0.049 0.951 36 H 0.079 0.921 37 H 0.089 0.911 38 H 0.079 0.921 39 H 0.086 0.914 40 H 0.393 0.607 41 H 0.084 0.916 42 H 0.068 0.932 43 H 0.133 0.867 44 H 0.145 0.855 45 H 0.136 0.864 46 H 0.116 0.884 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.102 3.841 8.828 9.628 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.368 6.368 2 C -0.151 4.151 3 Si 0.709 3.291 4 C -0.233 4.233 5 C -0.045 4.045 6 N -0.149 5.149 7 C -0.036 4.036 8 C 0.273 3.727 9 O -0.457 6.457 10 N -0.365 5.365 11 C -0.001 4.001 12 C -0.144 4.144 13 C -0.121 4.121 14 H 0.117 0.883 15 C -0.163 4.163 16 C 0.007 3.993 17 H 0.108 0.892 18 O -0.391 6.391 19 C -0.203 4.203 20 C -0.015 4.015 21 C -0.154 4.154 22 C -0.128 4.128 23 C -0.173 4.173 24 C -0.110 4.110 25 C -0.122 4.122 26 H 0.243 0.757 27 H 0.105 0.895 28 H -0.223 1.223 29 H -0.226 1.226 30 H 0.225 0.775 31 H 0.162 0.838 32 H 0.188 0.812 33 H 0.259 0.741 34 H 0.074 0.926 35 H 0.068 0.932 36 H 0.097 0.903 37 H 0.108 0.892 38 H 0.098 0.902 39 H 0.104 0.896 40 H 0.242 0.758 41 H 0.103 0.897 42 H 0.087 0.913 43 H 0.151 0.849 44 H 0.163 0.837 45 H 0.154 0.846 46 H 0.134 0.866 Dipole moment (debyes) X Y Z Total from point charges 0.791 4.436 7.728 8.946 hybrid contribution 0.649 -1.374 -0.616 1.640 sum 1.440 3.063 7.112 7.876 Atomic orbital electron populations 1.86449 1.17724 1.82399 1.50210 1.24581 0.84728 1.10432 0.95330 0.94122 0.76598 0.73486 0.84941 1.20794 1.11992 0.91867 0.98665 1.22083 0.98730 0.95382 0.88346 1.43471 1.51964 1.03771 1.15699 1.22018 0.88227 1.09408 0.83905 1.21563 0.90871 0.76415 0.83872 1.90808 1.75942 1.48732 1.30198 1.45844 1.07149 1.71106 1.12450 1.21284 0.79299 1.00948 0.98526 1.21650 0.93790 1.03827 0.95171 1.22217 0.94812 0.96705 0.98364 0.88324 1.23122 0.97409 0.97644 0.98109 1.23509 0.95680 0.92977 0.87153 0.89220 1.86479 1.71229 1.46661 1.34742 1.23748 0.98936 0.97118 1.00547 1.18403 1.01584 0.87124 0.94428 1.20255 1.04596 0.89160 1.01407 1.21128 0.98281 0.99042 0.94336 1.20912 1.02386 0.96988 0.97011 1.20448 0.99309 0.91831 0.99381 1.19380 1.03934 0.93966 0.94939 0.75670 0.89500 1.22285 1.22557 0.77451 0.83839 0.81242 0.74056 0.92580 0.93238 0.90268 0.89247 0.90223 0.89564 0.75754 0.89733 0.91297 0.84916 0.83685 0.84635 0.86561 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -2.46 12.88 -148.98 -1.92 -4.38 16 2 C -0.04 -0.19 3.06 71.24 0.22 0.03 16 3 Si 0.80 -0.22 30.75 68.60 2.11 1.89 16 4 C -0.23 -1.37 5.57 -18.63 -0.10 -1.48 16 5 C 0.08 0.05 9.89 83.00 0.82 0.87 16 6 N -0.47 -0.75 2.27 -519.98 -1.18 -1.93 16 7 C 0.09 -0.68 6.48 85.63 0.55 -0.12 16 8 C 0.49 -0.29 7.90 87.66 0.69 0.40 16 9 O -0.58 -6.99 16.42 -3.04 -0.05 -7.04 16 10 N -0.71 4.83 5.56 -463.08 -2.57 2.26 16 11 C 0.12 -0.45 5.67 86.38 0.49 0.04 16 12 C -0.11 0.85 5.16 30.59 0.16 1.01 16 13 C -0.10 0.55 3.64 -10.27 -0.04 0.51 16 14 H 0.10 -0.55 8.14 -2.39 -0.02 -0.57 16 15 C -0.13 0.44 7.47 31.12 0.23 0.67 16 16 C 0.07 -0.14 5.21 31.12 0.16 0.02 16 17 H 0.09 -0.37 8.14 -2.38 -0.02 -0.39 16 18 O -0.58 -0.56 13.67 -148.98 -2.04 -2.60 16 19 C -0.17 0.54 7.47 31.12 0.23 0.77 16 20 C 0.09 0.71 6.80 39.03 0.27 0.97 16 21 C -0.13 -0.80 10.00 22.37 0.22 -0.57 16 22 C -0.11 -0.63 10.01 22.29 0.22 -0.40 16 23 C -0.15 -1.18 9.97 22.03 0.22 -0.96 16 24 C -0.09 -0.98 10.05 22.23 0.22 -0.76 16 25 C -0.12 -1.27 6.35 -20.20 -0.13 -1.40 16 26 H 0.39 -1.92 8.70 -74.06 -0.64 -2.57 16 27 H 0.09 0.72 7.96 -2.39 -0.02 0.70 16 28 H -0.30 -1.85 7.11 99.48 0.71 -1.14 16 29 H -0.30 -2.01 7.11 99.48 0.71 -1.31 16 30 H 0.21 -1.75 6.35 -2.91 -0.02 -1.77 16 31 H 0.14 -1.80 8.14 -2.39 -0.02 -1.82 16 32 H 0.17 -2.85 8.12 -2.39 -0.02 -2.87 16 33 H 0.42 -6.13 8.47 -92.70 -0.79 -6.91 16 34 H 0.06 -0.03 8.14 -2.39 -0.02 -0.05 16 35 H 0.05 0.04 8.14 -2.38 -0.02 0.02 16 36 H 0.08 -0.67 7.88 -2.39 -0.02 -0.69 16 37 H 0.09 -0.92 8.14 -2.39 -0.02 -0.94 16 38 H 0.08 -0.35 8.14 -2.39 -0.02 -0.37 16 39 H 0.09 -0.19 8.10 -2.38 -0.02 -0.21 16 40 H 0.39 -2.60 9.12 -74.06 -0.68 -3.27 16 41 H 0.08 -0.17 7.92 -2.39 -0.02 -0.19 16 42 H 0.07 -0.21 8.14 -2.38 -0.02 -0.23 16 43 H 0.13 0.13 8.06 -2.91 -0.02 0.11 16 44 H 0.15 0.07 8.06 -2.91 -0.02 0.05 16 45 H 0.14 0.48 8.06 -2.91 -0.02 0.46 16 46 H 0.12 1.16 8.06 -2.91 -0.02 1.14 16 Total: 0.00 -32.74 386.44 -2.26 -35.00 By element: Atomic # 1 Polarization: -21.76 SS G_CDS: -1.05 Total: -22.81 kcal Atomic # 6 Polarization: -4.84 SS G_CDS: 4.45 Total: -0.39 kcal Atomic # 7 Polarization: 4.08 SS G_CDS: -3.75 Total: 0.33 kcal Atomic # 8 Polarization: -10.01 SS G_CDS: -4.01 Total: -14.02 kcal Atomic # 14 Polarization: -0.22 SS G_CDS: 2.11 Total: 1.89 kcal Total: -32.74 -2.26 -35.00 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17837616_9818708.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 4.815 kcal (2) G-P(sol) polarization free energy of solvation -32.743 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -27.928 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.257 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.000 kcal (6) G-S(sol) free energy of system = (1) + (5) -30.185 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds