Wall clock time and date at job start Sun Mar 7 2021 10:21:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34774 * 1 3 3 O 1.21277 * 120.00117 * 2 1 4 4 C 1.50705 * 119.99846 * 179.97438 * 2 1 3 5 5 C 1.53001 * 109.47033 * 179.97438 * 4 2 1 6 6 H 1.08999 * 109.46876 * 55.00521 * 5 4 2 7 7 C 1.52995 * 109.46996 * 175.00026 * 5 4 2 8 8 C 1.53001 * 109.46996 * 180.02562 * 7 5 4 9 9 C 1.53003 * 109.47065 * 300.00166 * 8 7 5 10 10 H 1.09001 * 109.46947 * 299.99462 * 9 8 7 11 11 C 1.53001 * 109.46693 * 179.97438 * 9 8 7 12 12 N 1.46505 * 109.46846 * 174.99688 * 11 9 8 13 13 C 1.34780 * 120.00216 * 179.97438 * 12 11 9 14 14 O 1.21287 * 119.99448 * 0.02562 * 13 12 11 15 15 C 1.50690 * 119.99950 * 180.02562 * 13 12 11 16 16 O 1.42900 * 109.46915 * 180.02562 * 15 13 12 17 17 C 1.35918 * 117.00284 * 180.02562 * 16 15 13 18 18 C 1.38679 * 120.05527 * 359.97438 * 17 16 15 19 19 C 1.38193 * 119.95577 * 179.69872 * 18 17 16 20 20 C 1.38243 * 120.06769 * 0.28454 * 19 18 17 21 21 C 1.50693 * 119.93911 * 179.97438 * 20 19 18 22 22 O 1.42903 * 109.47643 * 64.99536 * 21 20 19 23 23 Si 1.86309 * 109.47107 * 184.99800 * 21 20 19 24 24 C 1.38293 * 120.11922 * 359.97011 * 20 19 18 25 25 C 1.38189 * 120.04346 * 0.02741 * 24 20 19 26 26 Br 1.89108 * 120.03481 * 180.02562 * 25 24 20 27 27 C 1.52991 * 109.47041 * 60.00202 * 9 8 7 28 28 C 1.53001 * 109.47182 * 299.99462 * 27 9 8 29 29 H 0.97001 * 120.00119 * 180.02562 * 1 2 3 30 30 H 0.96996 * 119.99940 * 359.97438 * 1 2 3 31 31 H 1.08999 * 109.46626 * 59.99951 * 4 2 1 32 32 H 1.09000 * 109.46979 * 300.00166 * 4 2 1 33 33 H 1.09001 * 109.47576 * 60.00195 * 7 5 4 34 34 H 1.09001 * 109.47237 * 300.00023 * 7 5 4 35 35 H 1.09004 * 109.47207 * 180.02562 * 8 7 5 36 36 H 1.09002 * 109.47376 * 60.00464 * 8 7 5 37 37 H 1.08999 * 109.47403 * 55.00260 * 11 9 8 38 38 H 1.08998 * 109.47314 * 294.99854 * 11 9 8 39 39 H 0.97005 * 119.99959 * 0.02562 * 12 11 9 40 40 H 1.09001 * 109.47555 * 60.00596 * 15 13 12 41 41 H 1.08998 * 109.47359 * 300.00242 * 15 13 12 42 42 H 1.08002 * 120.02632 * 359.97438 * 18 17 16 43 43 H 1.07992 * 119.96579 * 180.29885 * 19 18 17 44 44 H 1.09001 * 109.47185 * 304.99078 * 21 20 19 45 45 H 0.96701 * 113.99666 * 60.00009 * 22 21 20 46 46 H 1.48505 * 109.99813 * 179.97438 * 23 21 20 47 47 H 1.48504 * 109.99780 * 301.31529 * 23 21 20 48 48 H 1.07997 * 119.97296 * 180.02562 * 24 20 19 49 49 H 1.08994 * 109.47520 * 59.99789 * 27 9 8 50 50 H 1.09001 * 109.46929 * 179.97438 * 27 9 8 51 51 H 1.08997 * 109.47661 * 300.00579 * 28 27 9 52 52 H 1.09004 * 109.47363 * 180.02562 * 28 27 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3477 0.0000 0.0000 3 8 1.9541 1.0503 0.0000 4 6 2.1012 -1.3052 0.0006 5 6 3.6055 -1.0256 -0.0002 6 1 3.8553 -0.3792 0.8412 7 6 4.3695 -2.3451 0.1261 8 6 5.8737 -2.0655 0.1260 9 6 6.2637 -1.3735 -1.1817 10 1 6.0143 -2.0198 -2.0232 11 6 7.7678 -1.0933 -1.1814 12 7 8.1617 -0.5402 -2.4796 13 6 9.4489 -0.2144 -2.7108 14 8 10.2812 -0.3796 -1.8442 15 6 9.8539 0.3550 -4.0460 16 8 11.2587 0.6166 -4.0459 17 6 11.7896 1.1371 -5.1837 18 6 10.9755 1.3902 -6.2774 19 6 11.5163 1.9252 -7.4311 20 6 12.8690 2.2028 -7.4979 21 6 13.4558 2.7857 -8.7576 22 8 12.9159 4.0908 -8.9752 23 14 15.3073 2.9005 -8.5849 24 6 13.6845 1.9467 -6.4108 25 6 13.1487 1.4118 -5.2548 26 35 14.2639 1.0623 -3.7681 27 6 5.4997 -0.0540 -1.3079 28 6 3.9955 -0.3336 -1.3079 29 1 -0.4850 -0.8400 0.0004 30 1 -0.4850 0.8400 0.0004 31 1 1.8378 -1.8771 -0.8892 32 1 1.8379 -1.8763 0.8908 33 1 4.1197 -2.9916 -0.7152 34 1 4.0920 -2.8379 1.0579 35 1 6.4181 -3.0056 0.2155 36 1 6.1233 -1.4193 0.9676 37 1 8.3103 -2.0216 -1.0024 38 1 8.0039 -0.3770 -0.3946 39 1 7.4959 -0.4078 -3.1726 40 1 9.3112 1.2833 -4.2248 41 1 9.6180 -0.3611 -4.8331 42 1 9.9187 1.1735 -6.2262 43 1 10.8817 2.1269 -8.2812 44 1 13.2090 2.1446 -9.6039 45 1 13.0975 4.7158 -8.2601 46 1 15.8981 3.4733 -9.8211 47 1 15.6568 3.7461 -7.4152 48 1 14.7408 2.1649 -6.4654 49 1 5.7492 0.5923 -0.4664 50 1 5.7779 0.4392 -2.2393 51 1 3.7459 -0.9798 -2.1493 52 1 3.4511 0.6065 -1.3982 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17846942_6201210.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:21:17 Heat of formation + Delta-G solvation = -132.029748 kcal Electronic energy + Delta-G solvation = -33748.360570 eV Core-core repulsion = 28952.995605 eV Total energy + Delta-G solvation = -4795.364965 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 441.103 amu Computer time = 1.52 seconds Orbital eigenvalues (eV) -41.70051 -41.03992 -40.61234 -39.44187 -38.98168 -37.35183 -36.15491 -34.61993 -33.64638 -33.44117 -32.15683 -31.61866 -30.70838 -30.02852 -28.66985 -26.43831 -25.53172 -23.99094 -23.67301 -22.49846 -22.17360 -21.67678 -21.03803 -20.62705 -19.56251 -18.62093 -18.21877 -18.14700 -17.60554 -17.55684 -17.25747 -16.72860 -16.50584 -16.43819 -16.22178 -15.97729 -15.73898 -15.60009 -15.22785 -15.10292 -15.04689 -14.81872 -14.65703 -14.31995 -14.26117 -14.03329 -13.99388 -13.60736 -13.38654 -13.27052 -12.98108 -12.62978 -12.48190 -12.41589 -12.35894 -12.20542 -11.96883 -11.87236 -11.79858 -11.73644 -11.39555 -11.30951 -11.20940 -11.13147 -10.90047 -10.69351 -10.63491 -10.49730 -10.19467 -10.00603 -9.33065 -4.95485 -0.03528 0.07654 0.63389 1.27982 1.41310 1.45020 1.55931 1.71815 1.91847 2.38764 2.51704 2.71003 3.41127 3.48437 3.52228 3.60041 3.77005 3.77609 3.79162 3.84730 4.00165 4.02136 4.04164 4.07734 4.07943 4.21936 4.33718 4.39768 4.49127 4.51166 4.55349 4.61691 4.65566 4.67060 4.68389 4.75153 4.79078 4.86213 4.87097 5.03118 5.03486 5.17497 5.21839 5.25863 5.29678 5.30749 5.34917 5.40958 5.46717 5.55697 5.64163 5.94532 6.04765 6.43446 6.46794 6.53101 7.12122 7.41909 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.846 5.846 2 C 0.506 3.494 3 O -0.592 6.592 4 C -0.135 4.135 5 C -0.074 4.074 6 H 0.050 0.950 7 C -0.106 4.106 8 C -0.115 4.115 9 C -0.084 4.084 10 H 0.098 0.902 11 C 0.126 3.874 12 N -0.708 5.708 13 C 0.510 3.490 14 O -0.570 6.570 15 C 0.034 3.966 16 O -0.305 6.305 17 C 0.149 3.851 18 C -0.195 4.195 19 C -0.032 4.032 20 C -0.148 4.148 21 C -0.062 4.062 22 O -0.543 6.543 23 Si 0.736 3.264 24 C -0.056 4.056 25 C -0.140 4.140 26 Br -0.051 7.051 27 C -0.111 4.111 28 C -0.116 4.116 29 H 0.417 0.583 30 H 0.402 0.598 31 H 0.119 0.881 32 H 0.114 0.886 33 H 0.081 0.919 34 H 0.072 0.928 35 H 0.073 0.927 36 H 0.053 0.947 37 H 0.062 0.938 38 H 0.050 0.950 39 H 0.419 0.581 40 H 0.127 0.873 41 H 0.132 0.868 42 H 0.172 0.828 43 H 0.158 0.842 44 H 0.138 0.862 45 H 0.386 0.614 46 H -0.296 1.296 47 H -0.287 1.287 48 H 0.145 0.855 49 H 0.043 0.957 50 H 0.070 0.930 51 H 0.073 0.927 52 H 0.055 0.945 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.370 -6.622 -4.572 13.126 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.410 5.410 2 C 0.293 3.707 3 O -0.472 6.472 4 C -0.175 4.175 5 C -0.093 4.093 6 H 0.069 0.931 7 C -0.144 4.144 8 C -0.153 4.153 9 C -0.103 4.103 10 H 0.116 0.884 11 C 0.002 3.998 12 N -0.363 5.363 13 C 0.296 3.704 14 O -0.449 6.449 15 C -0.043 4.043 16 O -0.217 6.217 17 C 0.101 3.899 18 C -0.214 4.214 19 C -0.050 4.050 20 C -0.150 4.150 21 C -0.172 4.172 22 O -0.351 6.351 23 Si 0.643 3.357 24 C -0.076 4.076 25 C -0.220 4.220 26 Br 0.034 6.966 27 C -0.148 4.148 28 C -0.153 4.153 29 H 0.248 0.752 30 H 0.232 0.768 31 H 0.137 0.863 32 H 0.132 0.868 33 H 0.099 0.901 34 H 0.090 0.910 35 H 0.092 0.908 36 H 0.072 0.928 37 H 0.081 0.919 38 H 0.068 0.932 39 H 0.257 0.743 40 H 0.144 0.856 41 H 0.150 0.850 42 H 0.190 0.810 43 H 0.175 0.825 44 H 0.156 0.844 45 H 0.235 0.765 46 H -0.223 1.223 47 H -0.214 1.214 48 H 0.162 0.838 49 H 0.062 0.938 50 H 0.089 0.911 51 H 0.092 0.908 52 H 0.073 0.927 Dipole moment (debyes) X Y Z Total from point charges -8.248 -6.147 -3.718 10.938 hybrid contribution -1.355 1.510 0.213 2.040 sum -9.603 -4.637 -3.505 11.225 Atomic orbital electron populations 1.43906 1.06784 1.13590 1.76670 1.21315 0.83286 0.92126 0.74004 1.90723 1.69104 1.35813 1.51599 1.21807 0.94968 0.94114 1.06573 1.20907 0.92960 0.97059 0.98336 0.93098 1.21538 0.93653 0.96022 1.03171 1.21512 0.96826 1.00597 0.96341 1.21344 0.91228 0.97583 1.00136 0.88406 1.21424 0.95817 0.98235 0.84274 1.45703 1.08201 1.64824 1.17539 1.20515 0.82845 0.77956 0.89129 1.90788 1.51965 1.54299 1.47826 1.22822 0.80591 1.04475 0.96448 1.86244 1.24407 1.77361 1.33670 1.18828 0.91428 0.93207 0.86413 1.21615 1.01583 1.05742 0.92483 1.21232 0.94101 0.92026 0.97640 1.20223 0.94945 1.03974 0.95821 1.24909 1.08891 0.85557 0.97876 1.86582 1.78012 1.21304 1.49236 0.94289 0.74613 0.90262 0.76530 1.20959 1.00345 0.95788 0.90483 1.21133 0.92293 1.12763 0.95832 1.96771 1.64519 1.94872 1.40403 1.21552 0.95151 0.96435 1.01681 1.21638 0.95512 1.00859 0.97285 0.75156 0.76784 0.86315 0.86803 0.90083 0.90978 0.90791 0.92831 0.91936 0.93179 0.74259 0.85570 0.85016 0.81020 0.82481 0.84420 0.76455 1.22326 1.21406 0.83766 0.93792 0.91110 0.90805 0.92664 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.85 5.81 8.87 -173.53 -1.54 4.27 16 2 C 0.51 -0.16 7.82 87.66 0.69 0.53 16 3 O -0.59 -5.92 14.80 -3.02 -0.04 -5.97 16 4 C -0.14 0.93 5.18 29.85 0.15 1.09 16 5 C -0.07 0.23 1.84 -10.79 -0.02 0.21 16 6 H 0.05 0.14 7.95 -2.39 -0.02 0.12 16 7 C -0.11 0.72 5.20 30.59 0.16 0.88 16 8 C -0.11 0.53 5.20 30.60 0.16 0.69 16 9 C -0.08 0.46 2.23 -10.80 -0.02 0.44 16 10 H 0.10 -0.85 8.14 -2.39 -0.02 -0.87 16 11 C 0.13 -0.12 5.06 86.38 0.44 0.32 16 12 N -0.71 2.45 5.28 -463.05 -2.45 0.01 16 13 C 0.51 1.69 7.91 87.65 0.69 2.38 16 14 O -0.57 -8.86 16.50 15.99 0.26 -8.60 16 15 C 0.03 -0.12 5.22 71.23 0.37 0.25 16 16 O -0.30 -1.73 9.01 -73.59 -0.66 -2.39 16 17 C 0.15 0.44 6.68 22.52 0.15 0.59 16 18 C -0.20 0.76 9.04 22.36 0.20 0.96 16 19 C -0.03 0.13 9.68 22.26 0.22 0.34 16 20 C -0.15 0.26 5.35 -19.85 -0.11 0.16 16 21 C -0.06 0.17 2.80 71.23 0.20 0.37 16 22 O -0.54 0.01 12.83 -148.98 -1.91 -1.90 16 23 Si 0.74 -0.93 29.88 68.60 2.05 1.12 16 24 C -0.06 -0.08 8.40 22.27 0.19 0.11 16 25 C -0.14 -0.74 6.24 22.40 0.14 -0.61 16 26 Br -0.05 -0.46 33.16 -20.37 -0.68 -1.14 16 27 C -0.11 0.34 5.08 30.59 0.16 0.49 16 28 C -0.12 0.26 4.95 30.60 0.15 0.41 16 29 H 0.42 -5.66 8.83 -92.71 -0.82 -6.48 16 30 H 0.40 -2.63 8.93 -92.71 -0.83 -3.46 16 31 H 0.12 -1.37 8.14 -2.39 -0.02 -1.39 16 32 H 0.11 -1.19 8.14 -2.39 -0.02 -1.21 16 33 H 0.08 -0.76 8.14 -2.39 -0.02 -0.78 16 34 H 0.07 -0.54 8.14 -2.39 -0.02 -0.56 16 35 H 0.07 -0.40 8.14 -2.38 -0.02 -0.42 16 36 H 0.05 -0.08 8.14 -2.39 -0.02 -0.10 16 37 H 0.06 0.08 8.14 -2.39 -0.02 0.06 16 38 H 0.05 0.18 8.14 -2.39 -0.02 0.16 16 39 H 0.42 -4.56 7.65 -92.70 -0.71 -5.27 16 40 H 0.13 -1.23 7.66 -2.39 -0.02 -1.25 16 41 H 0.13 -1.42 7.66 -2.39 -0.02 -1.44 16 42 H 0.17 -1.93 6.30 -2.91 -0.02 -1.94 16 43 H 0.16 -1.23 8.06 -2.91 -0.02 -1.25 16 44 H 0.14 -0.81 7.96 -2.39 -0.02 -0.83 16 45 H 0.39 -1.78 8.70 -74.06 -0.64 -2.43 16 46 H -0.30 -1.74 7.11 99.48 0.71 -1.04 16 47 H -0.29 -1.06 7.01 99.48 0.70 -0.37 16 48 H 0.15 -0.01 4.83 -2.91 -0.01 -0.02 16 49 H 0.04 0.08 8.14 -2.39 -0.02 0.06 16 50 H 0.07 -0.39 7.18 -2.39 -0.02 -0.41 16 51 H 0.07 -0.42 8.14 -2.39 -0.02 -0.44 16 52 H 0.05 0.23 5.96 -2.38 -0.01 0.22 16 Total: 0.00 -33.29 435.55 -3.03 -36.32 By element: Atomic # 1 Polarization: -29.35 SS G_CDS: -1.97 Total: -31.32 kcal Atomic # 6 Polarization: 5.70 SS G_CDS: 3.91 Total: 9.61 kcal Atomic # 7 Polarization: 8.26 SS G_CDS: -3.99 Total: 4.27 kcal Atomic # 8 Polarization: -16.50 SS G_CDS: -2.36 Total: -18.86 kcal Atomic # 14 Polarization: -0.93 SS G_CDS: 2.05 Total: 1.12 kcal Atomic # 35 Polarization: -0.46 SS G_CDS: -0.68 Total: -1.14 kcal Total: -33.29 -3.03 -36.32 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17846942_6201210.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -95.715 kcal (2) G-P(sol) polarization free energy of solvation -33.286 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -129.001 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.029 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.315 kcal (6) G-S(sol) free energy of system = (1) + (5) -132.030 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.53 seconds