Wall clock time and date at job start Sun Mar 7 2021 15:00:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.35532 * 125.68377 * 2 1 4 4 C 1.35451 * 108.87114 * 179.97438 * 3 2 1 5 5 C 1.50698 * 126.06487 * 180.02562 * 4 3 2 6 6 O 1.42894 * 109.47220 * 119.97638 * 5 4 3 7 7 Si 1.86303 * 109.47107 * 359.97438 * 5 4 3 8 8 C 1.39831 * 107.86800 * 0.02562 * 4 3 2 9 9 C 1.37655 * 125.67306 * 179.69125 * 2 1 3 10 10 C 1.46678 * 126.23585 * 0.02562 * 9 2 1 11 11 O 1.21699 * 119.99787 * 5.55169 * 10 9 2 12 12 N 1.34769 * 120.00407 * 185.55440 * 10 9 2 13 13 C 1.46504 * 120.00439 * 185.10698 * 12 10 9 14 14 H 1.09008 * 109.46762 * 34.99694 * 13 12 10 15 15 C 1.52998 * 109.47192 * 154.99458 * 13 12 10 16 16 C 1.53003 * 109.46924 * 179.97438 * 15 13 12 17 17 C 1.52999 * 109.47169 * 300.00244 * 16 15 13 18 18 H 1.09001 * 109.46916 * 299.99728 * 17 16 15 19 19 O 1.42896 * 109.46913 * 179.97438 * 17 16 15 20 20 C 1.42905 * 113.99829 * 149.99801 * 19 17 16 21 21 F 1.39896 * 109.47041 * 60.00220 * 20 19 17 22 22 F 1.39903 * 109.47028 * 180.02562 * 20 19 17 23 23 F 1.39898 * 109.47121 * 299.99950 * 20 19 17 24 24 C 1.52995 * 109.47070 * 60.00206 * 17 16 15 25 25 C 1.52999 * 109.47003 * 274.99765 * 13 12 10 26 26 H 1.08997 * 109.46787 * 86.08574 * 1 2 3 27 27 H 1.08990 * 109.47682 * 206.09058 * 1 2 3 28 28 H 1.08998 * 109.46775 * 326.09425 * 1 2 3 29 29 H 1.07997 * 125.56477 * 359.95424 * 3 2 1 30 30 H 1.09004 * 109.47576 * 239.97481 * 5 4 3 31 31 H 0.96704 * 114.00203 * 180.02562 * 6 5 4 32 32 H 1.48497 * 109.99910 * 60.00479 * 7 5 4 33 33 H 1.48508 * 109.99872 * 181.31949 * 7 5 4 34 34 H 1.08004 * 126.45706 * 180.02562 * 8 4 3 35 35 H 0.96999 * 120.00114 * 5.10210 * 12 10 9 36 36 H 1.09000 * 109.47457 * 299.99985 * 15 13 12 37 37 H 1.09001 * 109.47346 * 60.00118 * 15 13 12 38 38 H 1.09008 * 109.46863 * 60.00338 * 16 15 13 39 39 H 1.08998 * 109.46977 * 179.97438 * 16 15 13 40 40 H 1.09001 * 109.47641 * 59.99966 * 24 17 16 41 41 H 1.09000 * 109.47130 * 180.02562 * 24 17 16 42 42 H 1.08996 * 109.47071 * 299.99942 * 25 13 12 43 43 H 1.09005 * 109.47004 * 59.99938 * 25 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2556 1.1009 0.0000 4 6 3.5522 0.7091 0.0006 5 6 4.7538 1.6186 0.0013 6 8 5.5392 1.3691 1.1687 7 14 4.1888 3.3939 0.0006 8 6 3.5779 -0.6890 0.0004 9 6 2.2677 -1.1182 0.0060 10 6 1.8123 -2.5125 0.0130 11 8 0.6262 -2.7656 -0.0881 12 7 2.7071 -3.5132 0.1314 13 6 2.2664 -4.9064 0.0263 14 1 1.4584 -4.9779 -0.7020 15 6 3.4388 -5.7795 -0.4254 16 6 2.9785 -7.2346 -0.5346 17 6 2.4802 -7.7157 0.8296 18 1 3.2883 -7.6439 1.5576 19 8 2.0499 -9.0745 0.7274 20 6 2.2072 -9.8262 1.9326 21 9 1.4586 -9.2318 2.9540 22 9 1.7596 -11.1357 1.7272 23 9 3.5580 -9.8472 2.2960 24 6 1.3078 -6.8426 1.2812 25 6 1.7676 -5.3879 1.3902 26 1 -0.3633 0.0702 -1.0253 27 1 -0.3634 -0.9228 0.4519 28 1 -0.3633 0.8529 0.5733 29 1 1.9084 2.1235 -0.0007 30 1 5.3543 1.4280 -0.8882 31 1 6.3307 1.9208 1.2355 32 1 3.3692 3.6665 1.2084 33 1 5.3643 4.3009 -0.0309 34 1 4.4583 -1.3147 0.0011 35 1 3.6431 -3.3111 0.2862 36 1 3.7941 -5.4366 -1.3971 37 1 4.2467 -5.7081 0.3028 38 1 2.1704 -7.3064 -1.2627 39 1 3.8136 -7.8566 -0.8568 40 1 0.4997 -6.9144 0.5532 41 1 0.9531 -7.1850 2.2533 42 1 2.5755 -5.3164 2.1184 43 1 0.9323 -4.7658 1.7119 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17849236_10803934.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 15:00:16 Heat of formation + Delta-G solvation = -228.025525 kcal Electronic energy + Delta-G solvation = -31258.358028 eV Core-core repulsion = 26276.496160 eV Total energy + Delta-G solvation = -4981.861868 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 349.133 amu Computer time = 0.91 seconds Orbital eigenvalues (eV) -51.16843 -48.90357 -48.86199 -42.53233 -41.02330 -39.82752 -37.97405 -37.70927 -35.09222 -33.89284 -32.12315 -31.45045 -29.63917 -28.33503 -26.35036 -25.67191 -24.38150 -24.05743 -22.83750 -21.58634 -20.98046 -20.52692 -20.23630 -19.88861 -19.64345 -18.68099 -18.37903 -17.47697 -17.13944 -16.70584 -16.60332 -16.12927 -15.81465 -15.79960 -15.62548 -15.51222 -15.29070 -15.25297 -15.21943 -15.05838 -14.98927 -14.90456 -14.58563 -14.40203 -14.35645 -14.00394 -13.93000 -13.60630 -13.48028 -13.29595 -13.19712 -13.06796 -12.78261 -12.49611 -12.39368 -12.21589 -11.90121 -11.73580 -11.31495 -10.98819 -10.41150 -10.18937 -9.65015 -9.23057 -4.97579 0.45920 0.84107 1.28234 1.52040 1.56217 1.63601 1.97561 2.04322 2.28130 2.36510 2.99932 3.09408 3.35581 3.41089 3.43662 3.63981 3.71520 3.78118 3.87007 3.88666 3.90701 3.93632 4.10374 4.13463 4.20960 4.27428 4.34259 4.38964 4.48955 4.56972 4.63315 4.65939 4.77505 4.78588 4.87642 4.92216 4.99610 5.07923 5.19981 5.26737 5.37506 5.67224 5.92416 6.13071 6.42507 6.51539 7.15145 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.063 3.937 2 N -0.404 5.404 3 C 0.030 3.970 4 C -0.162 4.162 5 C -0.037 4.037 6 O -0.537 6.537 7 Si 0.676 3.324 8 C -0.111 4.111 9 C -0.056 4.056 10 C 0.594 3.406 11 O -0.545 6.545 12 N -0.717 5.717 13 C 0.146 3.854 14 H 0.095 0.905 15 C -0.124 4.124 16 C -0.109 4.109 17 C 0.083 3.917 18 H 0.084 0.916 19 O -0.366 6.366 20 C 0.594 3.406 21 F -0.174 7.174 22 F -0.142 7.142 23 F -0.176 7.176 24 C -0.144 4.144 25 C -0.127 4.127 26 H 0.081 0.919 27 H 0.105 0.895 28 H 0.084 0.916 29 H 0.174 0.826 30 H 0.073 0.927 31 H 0.377 0.623 32 H -0.255 1.255 33 H -0.262 1.262 34 H 0.145 0.855 35 H 0.404 0.596 36 H 0.085 0.915 37 H 0.076 0.924 38 H 0.084 0.916 39 H 0.084 0.916 40 H 0.083 0.917 41 H 0.081 0.919 42 H 0.069 0.931 43 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.149 3.460 -2.858 4.976 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 N -0.076 5.076 3 C -0.106 4.106 4 C -0.168 4.168 5 C -0.148 4.148 6 O -0.344 6.344 7 Si 0.577 3.423 8 C -0.137 4.137 9 C -0.169 4.169 10 C 0.382 3.618 11 O -0.424 6.424 12 N -0.367 5.367 13 C 0.042 3.958 14 H 0.113 0.887 15 C -0.162 4.162 16 C -0.147 4.147 17 C 0.027 3.973 18 H 0.102 0.898 19 O -0.290 6.290 20 C 0.502 3.498 21 F -0.156 7.156 22 F -0.123 7.123 23 F -0.158 7.158 24 C -0.183 4.183 25 C -0.166 4.166 26 H 0.099 0.901 27 H 0.124 0.876 28 H 0.103 0.897 29 H 0.191 0.809 30 H 0.090 0.910 31 H 0.224 0.776 32 H -0.179 1.179 33 H -0.187 1.187 34 H 0.162 0.838 35 H 0.239 0.761 36 H 0.104 0.896 37 H 0.094 0.906 38 H 0.103 0.897 39 H 0.103 0.897 40 H 0.101 0.899 41 H 0.099 0.901 42 H 0.088 0.912 43 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges 0.345 3.479 -2.558 4.332 hybrid contribution 1.599 -0.113 1.069 1.927 sum 1.944 3.366 -1.490 4.163 Atomic orbital electron populations 1.22371 0.75437 1.05753 1.04228 1.43768 1.07019 1.04625 1.52163 1.21762 0.89930 0.91727 1.07229 1.18590 0.92103 0.93885 1.12271 1.23995 0.92787 1.08341 0.89667 1.86599 1.40101 1.63937 1.43736 0.95421 0.84318 0.74315 0.88239 1.21158 0.94275 0.94596 1.03692 1.19979 0.90236 0.87583 1.19088 1.16946 0.85508 0.83484 0.75842 1.90803 1.16096 1.84741 1.50717 1.45663 1.11577 1.05414 1.74091 1.21070 0.97559 0.79322 0.97884 0.88725 1.21792 0.97641 0.93478 1.03307 1.21533 1.02660 0.95517 0.95035 1.22665 0.97296 0.77003 1.00331 0.89801 1.88361 1.84513 1.25898 1.30264 1.19573 0.74231 0.77717 0.78268 1.93264 1.77020 1.83787 1.61577 1.93288 1.89304 1.34839 1.94876 1.93262 1.34269 1.96283 1.91968 1.22158 0.98038 0.94544 1.03528 1.21882 1.02268 0.95128 0.97274 0.90058 0.87610 0.89717 0.80921 0.90954 0.77551 1.17949 1.18685 0.83777 0.76068 0.89593 0.90577 0.89735 0.89707 0.89854 0.90087 0.91226 0.90121 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.04 10.64 59.85 0.64 0.59 16 2 N -0.40 -0.49 3.16 -120.24 -0.38 -0.87 16 3 C 0.03 0.01 9.94 -16.91 -0.17 -0.16 16 4 C -0.16 -0.17 5.47 -105.02 -0.57 -0.74 16 5 C -0.04 0.01 3.01 36.00 0.11 0.12 16 6 O -0.54 -0.47 12.86 -35.23 -0.45 -0.93 16 7 Si 0.68 -0.94 30.59 -169.99 -5.20 -6.14 16 8 C -0.11 -0.11 10.28 -39.12 -0.40 -0.52 16 9 C -0.06 -0.10 6.88 -81.98 -0.56 -0.67 16 10 C 0.59 1.19 7.73 -12.86 -0.10 1.09 16 11 O -0.54 -2.52 14.32 5.19 0.07 -2.44 16 12 N -0.72 0.70 5.05 -55.11 -0.28 0.43 16 13 C 0.15 -0.22 2.42 -67.93 -0.16 -0.38 16 14 H 0.09 0.01 7.66 -51.92 -0.40 -0.39 16 15 C -0.12 0.43 5.39 -26.73 -0.14 0.29 16 16 C -0.11 0.28 5.57 -26.73 -0.15 0.14 16 17 C 0.08 -0.10 2.40 -26.73 -0.06 -0.16 16 18 H 0.08 -0.16 7.20 -51.93 -0.37 -0.53 16 19 O -0.37 -0.30 10.24 -35.23 -0.36 -0.66 16 20 C 0.59 0.70 3.71 101.05 0.37 1.07 16 21 F -0.17 -0.23 15.44 2.25 0.03 -0.19 16 22 F -0.14 -0.30 17.53 2.25 0.04 -0.26 16 23 F -0.18 -0.20 16.61 2.25 0.04 -0.16 16 24 C -0.14 0.14 5.39 -26.76 -0.14 -0.01 16 25 C -0.13 0.13 5.49 -26.76 -0.15 -0.02 16 26 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 27 H 0.11 0.10 6.21 -51.93 -0.32 -0.22 16 28 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 29 H 0.17 -0.43 6.19 -52.49 -0.32 -0.75 16 30 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 31 H 0.38 -1.15 8.74 45.56 0.40 -0.75 16 32 H -0.26 -0.45 7.11 56.52 0.40 -0.04 16 33 H -0.26 -0.22 7.11 56.52 0.40 0.19 16 34 H 0.14 -0.14 7.50 -52.48 -0.39 -0.53 16 35 H 0.40 -1.22 7.56 -40.82 -0.31 -1.53 16 36 H 0.09 -0.34 8.14 -51.93 -0.42 -0.76 16 37 H 0.08 -0.33 8.14 -51.93 -0.42 -0.75 16 38 H 0.08 -0.19 8.14 -51.92 -0.42 -0.61 16 39 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 40 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 41 H 0.08 -0.03 6.50 -51.93 -0.34 -0.37 16 42 H 0.07 -0.11 8.14 -51.93 -0.42 -0.54 16 43 H 0.08 0.07 8.09 -51.93 -0.42 -0.35 16 LS Contribution 363.08 15.07 5.47 5.47 Total: 0.00 -7.96 363.08 -7.99 -15.94 By element: Atomic # 1 Polarization: -5.37 SS G_CDS: -5.47 Total: -10.84 kcal Atomic # 6 Polarization: 2.16 SS G_CDS: -1.50 Total: 0.66 kcal Atomic # 7 Polarization: 0.21 SS G_CDS: -0.66 Total: -0.45 kcal Atomic # 8 Polarization: -3.29 SS G_CDS: -0.74 Total: -4.03 kcal Atomic # 9 Polarization: -0.73 SS G_CDS: 0.11 Total: -0.62 kcal Atomic # 14 Polarization: -0.94 SS G_CDS: -5.20 Total: -6.14 kcal Total LS contribution 5.47 Total: 5.47 kcal Total: -7.96 -7.99 -15.94 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17849236_10803934.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -212.081 kcal (2) G-P(sol) polarization free energy of solvation -7.957 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -220.038 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.987 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.945 kcal (6) G-S(sol) free energy of system = (1) + (5) -228.026 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds