Wall clock time and date at job start Sun Mar 7 2021 15:00:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.35532 * 125.68377 * 2 1 4 4 C 1.35451 * 108.87114 * 179.97438 * 3 2 1 5 5 C 1.50698 * 126.06487 * 180.02562 * 4 3 2 6 6 O 1.42894 * 109.47220 * 119.97638 * 5 4 3 7 7 Si 1.86303 * 109.47107 * 359.97438 * 5 4 3 8 8 C 1.39831 * 107.86800 * 0.02562 * 4 3 2 9 9 C 1.37655 * 125.67306 * 179.69125 * 2 1 3 10 10 C 1.46678 * 126.23585 * 0.02562 * 9 2 1 11 11 O 1.21699 * 119.99787 * 5.55169 * 10 9 2 12 12 N 1.34769 * 120.00407 * 185.55440 * 10 9 2 13 13 C 1.46504 * 120.00439 * 185.10698 * 12 10 9 14 14 H 1.09008 * 109.46762 * 34.99694 * 13 12 10 15 15 C 1.52998 * 109.47192 * 154.99458 * 13 12 10 16 16 C 1.53003 * 109.46924 * 179.97438 * 15 13 12 17 17 C 1.52999 * 109.47169 * 300.00244 * 16 15 13 18 18 H 1.09001 * 109.46916 * 299.99728 * 17 16 15 19 19 O 1.42896 * 109.46913 * 179.97438 * 17 16 15 20 20 C 1.42905 * 113.99829 * 149.99801 * 19 17 16 21 21 F 1.39896 * 109.47041 * 60.00220 * 20 19 17 22 22 F 1.39903 * 109.47028 * 180.02562 * 20 19 17 23 23 F 1.39898 * 109.47121 * 299.99950 * 20 19 17 24 24 C 1.52995 * 109.47070 * 60.00206 * 17 16 15 25 25 C 1.52999 * 109.47003 * 274.99765 * 13 12 10 26 26 H 1.08997 * 109.46787 * 86.08574 * 1 2 3 27 27 H 1.08990 * 109.47682 * 206.09058 * 1 2 3 28 28 H 1.08998 * 109.46775 * 326.09425 * 1 2 3 29 29 H 1.07997 * 125.56477 * 359.95424 * 3 2 1 30 30 H 1.09004 * 109.47576 * 239.97481 * 5 4 3 31 31 H 0.96704 * 114.00203 * 180.02562 * 6 5 4 32 32 H 1.48497 * 109.99910 * 60.00479 * 7 5 4 33 33 H 1.48508 * 109.99872 * 181.31949 * 7 5 4 34 34 H 1.08004 * 126.45706 * 180.02562 * 8 4 3 35 35 H 0.96999 * 120.00114 * 5.10210 * 12 10 9 36 36 H 1.09000 * 109.47457 * 299.99985 * 15 13 12 37 37 H 1.09001 * 109.47346 * 60.00118 * 15 13 12 38 38 H 1.09008 * 109.46863 * 60.00338 * 16 15 13 39 39 H 1.08998 * 109.46977 * 179.97438 * 16 15 13 40 40 H 1.09001 * 109.47641 * 59.99966 * 24 17 16 41 41 H 1.09000 * 109.47130 * 180.02562 * 24 17 16 42 42 H 1.08996 * 109.47071 * 299.99942 * 25 13 12 43 43 H 1.09005 * 109.47004 * 59.99938 * 25 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2556 1.1009 0.0000 4 6 3.5522 0.7091 0.0006 5 6 4.7538 1.6186 0.0013 6 8 5.5392 1.3691 1.1687 7 14 4.1888 3.3939 0.0006 8 6 3.5779 -0.6890 0.0004 9 6 2.2677 -1.1182 0.0060 10 6 1.8123 -2.5125 0.0130 11 8 0.6262 -2.7656 -0.0881 12 7 2.7071 -3.5132 0.1314 13 6 2.2664 -4.9064 0.0263 14 1 1.4584 -4.9779 -0.7020 15 6 3.4388 -5.7795 -0.4254 16 6 2.9785 -7.2346 -0.5346 17 6 2.4802 -7.7157 0.8296 18 1 3.2883 -7.6439 1.5576 19 8 2.0499 -9.0745 0.7274 20 6 2.2072 -9.8262 1.9326 21 9 1.4586 -9.2318 2.9540 22 9 1.7596 -11.1357 1.7272 23 9 3.5580 -9.8472 2.2960 24 6 1.3078 -6.8426 1.2812 25 6 1.7676 -5.3879 1.3902 26 1 -0.3633 0.0702 -1.0253 27 1 -0.3634 -0.9228 0.4519 28 1 -0.3633 0.8529 0.5733 29 1 1.9084 2.1235 -0.0007 30 1 5.3543 1.4280 -0.8882 31 1 6.3307 1.9208 1.2355 32 1 3.3692 3.6665 1.2084 33 1 5.3643 4.3009 -0.0309 34 1 4.4583 -1.3147 0.0011 35 1 3.6431 -3.3111 0.2862 36 1 3.7941 -5.4366 -1.3971 37 1 4.2467 -5.7081 0.3028 38 1 2.1704 -7.3064 -1.2627 39 1 3.8136 -7.8566 -0.8568 40 1 0.4997 -6.9144 0.5532 41 1 0.9531 -7.1850 2.2533 42 1 2.5755 -5.3164 2.1184 43 1 0.9323 -4.7658 1.7119 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17849236_10803934.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 15:00:15 Heat of formation + Delta-G solvation = -227.113428 kcal Electronic energy + Delta-G solvation = -31258.318476 eV Core-core repulsion = 26276.496160 eV Total energy + Delta-G solvation = -4981.822316 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 349.133 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -51.27052 -49.02382 -48.95459 -42.54493 -40.99478 -39.88069 -37.97346 -37.70376 -35.11643 -33.88573 -31.99709 -31.45428 -29.59592 -28.29847 -26.41427 -25.65177 -24.36966 -23.94137 -22.81984 -21.52837 -20.99570 -20.56473 -20.24585 -19.98011 -19.70291 -18.66829 -18.35088 -17.44885 -17.16700 -16.72403 -16.60720 -16.13921 -15.83327 -15.78084 -15.74009 -15.49285 -15.38638 -15.25817 -15.25768 -15.14383 -15.07031 -14.89778 -14.60060 -14.44236 -14.29431 -14.01536 -13.91181 -13.57466 -13.35274 -13.25433 -13.13864 -12.99293 -12.74189 -12.50701 -12.26694 -12.12753 -11.93054 -11.61731 -11.27343 -11.08670 -10.37136 -10.21236 -9.65780 -9.25001 -4.86898 0.40677 0.79362 1.35240 1.54449 1.59929 1.68866 2.00111 2.03237 2.28335 2.30774 2.93183 3.02947 3.45884 3.50262 3.54412 3.67262 3.81643 3.88105 3.93433 3.96093 4.01763 4.06185 4.16732 4.22880 4.34709 4.37527 4.41847 4.44848 4.61691 4.65250 4.71902 4.73721 4.79516 4.94356 5.01593 5.03253 5.05687 5.18398 5.20853 5.34707 5.41757 5.67393 5.90709 6.15837 6.45643 6.72183 7.11166 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.062 3.938 2 N -0.413 5.413 3 C 0.031 3.969 4 C -0.182 4.182 5 C -0.046 4.046 6 O -0.560 6.560 7 Si 0.761 3.239 8 C -0.111 4.111 9 C -0.079 4.079 10 C 0.589 3.411 11 O -0.580 6.580 12 N -0.703 5.703 13 C 0.147 3.853 14 H 0.076 0.924 15 C -0.114 4.114 16 C -0.106 4.106 17 C 0.078 3.922 18 H 0.095 0.905 19 O -0.374 6.374 20 C 0.596 3.404 21 F -0.176 7.176 22 F -0.149 7.149 23 F -0.174 7.174 24 C -0.140 4.140 25 C -0.120 4.120 26 H 0.088 0.912 27 H 0.085 0.915 28 H 0.107 0.893 29 H 0.197 0.803 30 H 0.090 0.910 31 H 0.392 0.608 32 H -0.298 1.298 33 H -0.291 1.291 34 H 0.160 0.840 35 H 0.416 0.584 36 H 0.097 0.903 37 H 0.093 0.907 38 H 0.079 0.921 39 H 0.095 0.905 40 H 0.074 0.926 41 H 0.074 0.926 42 H 0.080 0.920 43 H 0.057 0.943 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.490 3.968 -3.354 6.259 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 N -0.085 5.085 3 C -0.106 4.106 4 C -0.188 4.188 5 C -0.155 4.155 6 O -0.369 6.369 7 Si 0.666 3.334 8 C -0.138 4.138 9 C -0.192 4.192 10 C 0.378 3.622 11 O -0.462 6.462 12 N -0.354 5.354 13 C 0.043 3.957 14 H 0.094 0.906 15 C -0.152 4.152 16 C -0.144 4.144 17 C 0.023 3.977 18 H 0.113 0.887 19 O -0.298 6.298 20 C 0.504 3.496 21 F -0.159 7.159 22 F -0.131 7.131 23 F -0.157 7.157 24 C -0.179 4.179 25 C -0.159 4.159 26 H 0.107 0.893 27 H 0.104 0.896 28 H 0.125 0.875 29 H 0.214 0.786 30 H 0.108 0.892 31 H 0.242 0.758 32 H -0.226 1.226 33 H -0.218 1.218 34 H 0.178 0.822 35 H 0.253 0.747 36 H 0.115 0.885 37 H 0.112 0.888 38 H 0.097 0.903 39 H 0.113 0.887 40 H 0.093 0.907 41 H 0.093 0.907 42 H 0.099 0.901 43 H 0.075 0.925 Dipole moment (debyes) X Y Z Total from point charges 1.725 3.964 -3.069 5.302 hybrid contribution 1.194 -0.234 1.268 1.757 sum 2.919 3.730 -1.801 5.068 Atomic orbital electron populations 1.22427 0.74796 1.05677 1.04933 1.43997 1.07651 1.04783 1.52100 1.22207 0.89857 0.92505 1.06040 1.18903 0.92912 0.94223 1.12806 1.24207 0.92646 1.08676 0.89982 1.86551 1.41117 1.64855 1.44383 0.94452 0.81264 0.71973 0.85691 1.21424 0.94423 0.95052 1.02862 1.20110 0.90878 0.87681 1.20520 1.17139 0.85344 0.84159 0.75558 1.90782 1.17526 1.85244 1.52601 1.45583 1.11799 1.05106 1.72879 1.21070 0.98126 0.79395 0.97123 0.90602 1.21748 0.96895 0.92194 1.04367 1.21546 1.02825 0.96095 0.93969 1.22855 0.97233 0.76021 1.01582 0.88669 1.88372 1.84722 1.26718 1.29967 1.19560 0.74193 0.77498 0.78378 1.93260 1.77102 1.83776 1.61726 1.93268 1.89405 1.35460 1.94931 1.93260 1.34152 1.96271 1.91989 1.22092 0.98148 0.94702 1.02936 1.21792 1.01718 0.94574 0.97806 0.89310 0.89609 0.87481 0.78639 0.89204 0.75825 1.22569 1.21782 0.82240 0.74690 0.88453 0.88845 0.90262 0.88667 0.90721 0.90738 0.90128 0.92468 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.04 10.64 127.77 1.36 1.32 16 2 N -0.41 -1.18 3.16 -534.34 -1.69 -2.87 16 3 C 0.03 0.01 9.94 83.48 0.83 0.84 16 4 C -0.18 -0.28 5.47 -20.12 -0.11 -0.39 16 5 C -0.05 0.08 3.01 71.24 0.21 0.29 16 6 O -0.56 -0.62 12.86 -148.98 -1.92 -2.54 16 7 Si 0.76 -2.58 30.59 68.60 2.10 -0.48 16 8 C -0.11 -0.20 10.28 22.57 0.23 0.03 16 9 C -0.08 -0.34 6.88 40.35 0.28 -0.06 16 10 C 0.59 3.09 7.73 86.45 0.67 3.76 16 11 O -0.58 -6.63 14.32 -4.35 -0.06 -6.69 16 12 N -0.70 1.14 5.05 -446.49 -2.25 -1.11 16 13 C 0.15 -0.37 2.42 44.99 0.11 -0.26 16 14 H 0.08 0.13 7.66 -2.38 -0.02 0.11 16 15 C -0.11 0.91 5.39 30.59 0.16 1.08 16 16 C -0.11 0.62 5.57 30.60 0.17 0.79 16 17 C 0.08 -0.20 2.40 30.59 0.07 -0.12 16 18 H 0.10 -0.44 7.20 -2.39 -0.02 -0.46 16 19 O -0.37 -0.68 10.24 -148.98 -1.52 -2.21 16 20 C 0.60 1.54 3.71 113.37 0.42 1.96 16 21 F -0.18 -0.55 15.44 44.97 0.69 0.15 16 22 F -0.15 -0.70 17.53 44.97 0.79 0.08 16 23 F -0.17 -0.36 16.61 44.97 0.75 0.39 16 24 C -0.14 0.13 5.39 30.58 0.16 0.30 16 25 C -0.12 0.14 5.49 30.58 0.17 0.31 16 26 H 0.09 -0.22 8.14 -2.39 -0.02 -0.24 16 27 H 0.09 0.34 6.21 -2.39 -0.01 0.32 16 28 H 0.11 -0.61 8.14 -2.39 -0.02 -0.63 16 29 H 0.20 -1.15 6.19 -2.91 -0.02 -1.17 16 30 H 0.09 -0.48 7.96 -2.39 -0.02 -0.50 16 31 H 0.39 -2.64 8.74 -74.05 -0.65 -3.28 16 32 H -0.30 -1.14 7.11 99.48 0.71 -0.43 16 33 H -0.29 -0.38 7.11 99.48 0.71 0.32 16 34 H 0.16 -0.42 7.50 -2.91 -0.02 -0.45 16 35 H 0.42 -2.73 7.56 -92.71 -0.70 -3.44 16 36 H 0.10 -0.92 8.14 -2.39 -0.02 -0.94 16 37 H 0.09 -1.01 8.14 -2.39 -0.02 -1.03 16 38 H 0.08 -0.35 8.14 -2.38 -0.02 -0.37 16 39 H 0.09 -0.69 8.14 -2.39 -0.02 -0.71 16 40 H 0.07 0.05 8.14 -2.39 -0.02 0.03 16 41 H 0.07 0.03 6.50 -2.39 -0.02 0.01 16 42 H 0.08 -0.27 8.14 -2.39 -0.02 -0.29 16 43 H 0.06 0.23 8.09 -2.38 -0.02 0.21 16 Total: 0.00 -19.78 363.08 1.39 -18.38 By element: Atomic # 1 Polarization: -12.71 SS G_CDS: -0.23 Total: -12.94 kcal Atomic # 6 Polarization: 5.10 SS G_CDS: 4.74 Total: 9.84 kcal Atomic # 7 Polarization: -0.04 SS G_CDS: -3.94 Total: -3.99 kcal Atomic # 8 Polarization: -7.93 SS G_CDS: -3.50 Total: -11.44 kcal Atomic # 9 Polarization: -1.61 SS G_CDS: 2.23 Total: 0.62 kcal Atomic # 14 Polarization: -2.58 SS G_CDS: 2.10 Total: -0.48 kcal Total: -19.78 1.39 -18.38 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17849236_10803934.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -208.729 kcal (2) G-P(sol) polarization free energy of solvation -19.775 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -228.504 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.391 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.384 kcal (6) G-S(sol) free energy of system = (1) + (5) -227.113 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds