Wall clock time and date at job start Sun Mar 7 2021 15:00:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.35456 * 125.56466 * 2 1 4 4 C 1.50700 * 126.06573 * 359.94714 * 3 2 1 5 5 O 1.42908 * 109.46822 * 296.46104 * 4 3 2 6 6 Si 1.86295 * 109.47336 * 56.46390 * 4 3 2 7 7 C 1.39835 * 107.86541 * 179.97438 * 3 2 1 8 8 C 1.50698 * 126.45853 * 180.02562 * 7 3 2 9 9 C 1.37875 * 107.08243 * 359.97438 * 7 3 2 10 10 C 1.46680 * 126.22961 * 179.97438 * 9 7 3 11 11 O 1.21691 * 120.00107 * 0.02562 * 10 9 7 12 12 N 1.34778 * 119.99645 * 180.02562 * 10 9 7 13 13 C 1.46503 * 119.99553 * 180.02562 * 12 10 9 14 14 H 1.08998 * 109.47309 * 34.99801 * 13 12 10 15 15 C 1.53003 * 109.46918 * 154.99898 * 13 12 10 16 16 C 1.53001 * 109.46954 * 179.97438 * 15 13 12 17 17 C 1.52996 * 109.47604 * 300.00241 * 16 15 13 18 18 H 1.08998 * 109.47064 * 299.99789 * 17 16 15 19 19 O 1.42899 * 109.47309 * 179.97438 * 17 16 15 20 20 C 1.42901 * 113.99824 * 149.99636 * 19 17 16 21 21 F 1.39907 * 109.47124 * 60.00314 * 20 19 17 22 22 F 1.39906 * 109.46872 * 179.97438 * 20 19 17 23 23 F 1.39896 * 109.47625 * 300.00009 * 20 19 17 24 24 C 1.52999 * 109.47330 * 59.99560 * 17 16 15 25 25 C 1.52999 * 109.46893 * 274.99460 * 13 12 10 26 26 N 1.35532 * 125.56423 * 180.22850 * 2 1 3 27 27 H 1.08996 * 109.47131 * 94.30310 * 1 2 3 28 28 H 1.08997 * 109.47206 * 214.30436 * 1 2 3 29 29 H 1.08998 * 109.46775 * 334.30331 * 1 2 3 30 30 H 1.08998 * 109.47253 * 176.46842 * 4 3 2 31 31 H 0.96699 * 113.99498 * 60.00743 * 5 4 3 32 32 H 1.48499 * 109.99916 * 63.73024 * 6 4 3 33 33 H 1.48503 * 110.00039 * 185.04740 * 6 4 3 34 34 H 1.08996 * 109.46981 * 269.98543 * 8 7 3 35 35 H 1.09000 * 109.46584 * 29.98590 * 8 7 3 36 36 H 1.09001 * 109.46889 * 149.98395 * 8 7 3 37 37 H 0.96992 * 120.00431 * 0.02562 * 12 10 9 38 38 H 1.08998 * 109.47210 * 59.99842 * 15 13 12 39 39 H 1.08997 * 109.46888 * 299.99641 * 15 13 12 40 40 H 1.09008 * 109.46741 * 60.00212 * 16 15 13 41 41 H 1.08998 * 109.47136 * 180.02562 * 16 15 13 42 42 H 1.08999 * 109.47747 * 179.97438 * 24 17 16 43 43 H 1.09008 * 109.46873 * 60.00116 * 24 17 16 44 44 H 1.08998 * 109.47421 * 300.00272 * 25 13 12 45 45 H 1.09008 * 109.46869 * 60.00194 * 25 13 12 46 46 H 0.97001 * 125.67552 * 0.06955 * 26 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2949 1.1019 0.0000 4 6 1.8200 2.5321 -0.0011 5 8 1.1010 2.7943 -1.2080 6 14 0.7022 2.8165 1.4619 7 6 3.6270 0.6768 0.0006 8 6 4.8486 1.5592 0.0014 9 6 3.6122 -0.7019 0.0015 10 6 4.7860 -1.5815 0.0019 11 8 5.9049 -1.1031 0.0018 12 7 4.6252 -2.9197 0.0023 13 6 5.7976 -3.7982 0.0032 14 1 6.5929 -3.3422 0.5928 15 6 5.4214 -5.1500 0.6132 16 6 6.6457 -6.0677 0.6136 17 6 7.1294 -6.2734 -0.8233 18 1 6.3339 -6.7293 -1.4127 19 8 8.2732 -7.1301 -0.8228 20 6 8.4077 -7.9206 -2.0056 21 9 8.5221 -7.0799 -3.1180 22 9 9.5523 -8.7189 -1.9052 23 9 7.2808 -8.7367 -2.1518 24 6 7.5055 -4.9217 -1.4333 25 6 6.2817 -4.0040 -1.4335 26 7 2.2953 -1.1025 -0.0044 27 1 -0.3633 -0.0771 -1.0247 28 1 -0.3633 -0.8489 0.5792 29 1 -0.3633 0.9260 0.4456 30 1 2.6788 3.2002 0.0625 31 1 0.3219 2.2348 -1.3311 32 1 1.4623 2.6347 2.7246 33 1 0.1307 4.1860 1.4058 34 1 5.1438 1.7719 -1.0261 35 1 4.6216 2.4934 0.5150 36 1 5.6639 1.0505 0.5158 37 1 3.7334 -3.3011 0.0020 38 1 4.6262 -5.6060 0.0236 39 1 5.0766 -5.0033 1.6367 40 1 7.4413 -5.6118 1.2030 41 1 6.3776 -7.0309 1.0477 42 1 7.8506 -5.0682 -2.4568 43 1 8.3011 -4.4658 -0.8438 44 1 5.4864 -4.4600 -2.0231 45 1 6.5497 -3.0409 -1.8681 46 1 1.9833 -2.0210 -0.0090 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17849236_12297754.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 15:00:26 Heat of formation + Delta-G solvation = -246.765985 kcal Electronic energy + Delta-G solvation = -33479.686584 eV Core-core repulsion = 28341.474450 eV Total energy + Delta-G solvation = -5138.212134 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 363.149 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -51.20395 -48.93828 -48.89808 -42.73111 -41.10567 -39.91496 -37.98703 -37.70740 -35.10517 -33.90881 -32.89050 -32.18419 -30.31382 -29.30384 -27.53102 -26.59182 -26.02217 -24.19113 -23.73234 -22.25342 -21.64591 -20.72019 -20.52773 -20.28567 -19.92609 -19.73265 -19.31397 -17.77826 -17.45730 -16.89334 -16.70478 -16.53245 -16.16422 -15.86818 -15.81263 -15.66059 -15.51866 -15.46692 -15.30682 -15.21345 -15.10084 -15.03594 -14.74748 -14.66137 -14.48188 -14.20734 -14.05636 -14.00434 -13.90290 -13.87499 -13.54428 -13.32078 -13.23831 -13.15444 -12.86327 -12.56773 -12.46070 -12.38471 -12.27551 -11.98373 -11.79789 -11.36099 -10.98589 -10.52232 -10.27305 -9.53375 -9.04593 -4.99090 0.36085 0.80092 1.21145 1.53725 1.76347 1.85022 1.92647 2.04546 2.09061 2.33360 2.95836 3.05300 3.29461 3.35151 3.56663 3.61128 3.63102 3.66015 3.74197 3.82132 3.83739 3.89423 3.99888 4.06890 4.13634 4.18791 4.28176 4.29946 4.41786 4.48857 4.56568 4.60233 4.68148 4.69445 4.81093 4.86243 4.88495 4.95004 5.01081 5.03135 5.19942 5.21120 5.25753 5.38609 5.68703 5.85330 6.21672 6.38874 6.61685 7.10117 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.098 4.098 2 C 0.067 3.933 3 C -0.204 4.204 4 C -0.030 4.030 5 O -0.541 6.541 6 Si 0.664 3.336 7 C -0.047 4.047 8 C -0.095 4.095 9 C -0.063 4.063 10 C 0.593 3.407 11 O -0.520 6.520 12 N -0.731 5.731 13 C 0.143 3.857 14 H 0.097 0.903 15 C -0.123 4.123 16 C -0.110 4.110 17 C 0.083 3.917 18 H 0.083 0.917 19 O -0.366 6.366 20 C 0.594 3.406 21 F -0.174 7.174 22 F -0.141 7.141 23 F -0.176 7.176 24 C -0.145 4.145 25 C -0.126 4.126 26 N -0.534 5.534 27 H 0.088 0.912 28 H 0.081 0.919 29 H 0.088 0.912 30 H 0.114 0.886 31 H 0.371 0.629 32 H -0.255 1.255 33 H -0.251 1.251 34 H 0.071 0.929 35 H 0.061 0.939 36 H 0.083 0.917 37 H 0.393 0.607 38 H 0.073 0.927 39 H 0.084 0.916 40 H 0.085 0.915 41 H 0.084 0.916 42 H 0.081 0.919 43 H 0.084 0.916 44 H 0.068 0.932 45 H 0.081 0.919 46 H 0.416 0.584 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.618 -3.713 1.309 8.575 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C -0.051 4.051 3 C -0.211 4.211 4 C -0.142 4.142 5 O -0.345 6.345 6 Si 0.565 3.435 7 C -0.056 4.056 8 C -0.152 4.152 9 C -0.175 4.175 10 C 0.381 3.619 11 O -0.395 6.395 12 N -0.382 5.382 13 C 0.039 3.961 14 H 0.115 0.885 15 C -0.161 4.161 16 C -0.148 4.148 17 C 0.028 3.972 18 H 0.101 0.899 19 O -0.290 6.290 20 C 0.502 3.498 21 F -0.156 7.156 22 F -0.123 7.123 23 F -0.158 7.158 24 C -0.183 4.183 25 C -0.165 4.165 26 N -0.131 5.131 27 H 0.107 0.893 28 H 0.100 0.900 29 H 0.106 0.894 30 H 0.131 0.869 31 H 0.218 0.782 32 H -0.180 1.180 33 H -0.175 1.175 34 H 0.090 0.910 35 H 0.080 0.920 36 H 0.102 0.898 37 H 0.227 0.773 38 H 0.092 0.908 39 H 0.102 0.898 40 H 0.103 0.897 41 H 0.103 0.897 42 H 0.100 0.900 43 H 0.102 0.898 44 H 0.086 0.914 45 H 0.099 0.901 46 H 0.253 0.747 Dipole moment (debyes) X Y Z Total from point charges -6.335 -2.637 2.087 7.172 hybrid contribution -0.040 -0.891 -0.651 1.104 sum -6.375 -3.528 1.436 7.426 Atomic orbital electron populations 1.20596 0.87337 1.03620 1.03831 1.20205 0.93544 0.85727 1.05626 1.19492 0.92857 0.94860 1.13871 1.24344 1.00460 0.93048 0.96305 1.86546 1.43655 1.63141 1.41188 0.95373 0.86372 0.84916 0.76828 1.19787 0.94790 0.90996 0.99989 1.20404 0.94517 0.97612 1.02677 1.20030 0.82796 0.93939 1.20722 1.17002 0.87572 0.81195 0.76101 1.90848 1.24124 1.74873 1.49688 1.45907 1.09571 1.05791 1.76907 1.21075 0.88469 0.89649 0.96885 0.88498 1.21781 0.97889 0.93937 1.02515 1.21533 0.98146 1.01158 0.93957 1.22649 0.85350 0.89591 0.99643 0.89868 1.88364 1.49623 1.55579 1.35444 1.19572 0.74748 0.77150 0.78308 1.93268 1.95819 1.71502 1.55042 1.93291 1.49983 1.73113 1.95871 1.93260 1.52979 1.73995 1.95565 1.22164 0.99311 0.94076 1.02776 1.21875 0.97255 1.00625 0.96721 1.41718 1.05274 1.08239 1.57887 0.89312 0.90039 0.89417 0.86911 0.78233 1.17955 1.17536 0.91015 0.92020 0.89836 0.77320 0.90788 0.89760 0.89663 0.89727 0.90016 0.89772 0.91373 0.90081 0.74652 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.58 8.94 36.01 0.32 0.90 16 2 C 0.07 -0.14 6.75 -81.95 -0.55 -0.69 16 3 C -0.20 -0.14 4.67 -105.02 -0.49 -0.63 16 4 C -0.03 -0.02 2.89 36.01 0.10 0.09 16 5 O -0.54 -0.45 12.88 -35.23 -0.45 -0.91 16 6 Si 0.66 -0.37 29.29 -169.99 -4.98 -5.35 16 7 C -0.05 -0.12 6.21 -104.16 -0.65 -0.76 16 8 C -0.10 -0.26 9.53 36.00 0.34 0.08 16 9 C -0.06 -0.06 7.06 -81.98 -0.58 -0.64 16 10 C 0.59 0.92 7.75 -12.85 -0.10 0.82 16 11 O -0.52 -2.63 14.46 5.20 0.08 -2.56 16 12 N -0.73 1.53 5.07 -55.11 -0.28 1.25 16 13 C 0.14 -0.29 2.45 -67.93 -0.17 -0.46 16 14 H 0.10 0.00 7.58 -51.93 -0.39 -0.40 16 15 C -0.12 0.51 5.39 -26.73 -0.14 0.36 16 16 C -0.11 0.33 5.57 -26.73 -0.15 0.18 16 17 C 0.08 -0.13 2.40 -26.73 -0.06 -0.20 16 18 H 0.08 -0.20 7.20 -51.93 -0.37 -0.57 16 19 O -0.37 -0.20 10.24 -35.23 -0.36 -0.56 16 20 C 0.59 0.53 3.71 101.05 0.37 0.90 16 21 F -0.17 -0.18 15.44 2.25 0.03 -0.14 16 22 F -0.14 -0.27 17.53 2.25 0.04 -0.23 16 23 F -0.18 -0.14 16.61 2.25 0.04 -0.10 16 24 C -0.15 0.18 5.39 -26.75 -0.14 0.04 16 25 C -0.13 0.19 5.49 -26.75 -0.15 0.05 16 26 N -0.53 1.33 5.99 -5.69 -0.03 1.30 16 27 H 0.09 -0.63 8.14 -51.93 -0.42 -1.06 16 28 H 0.08 -0.60 8.14 -51.93 -0.42 -1.02 16 29 H 0.09 -0.59 4.06 -51.93 -0.21 -0.80 16 30 H 0.11 0.17 6.77 -51.93 -0.35 -0.18 16 31 H 0.37 -1.25 7.37 45.56 0.34 -0.91 16 32 H -0.26 -0.67 7.11 56.52 0.40 -0.27 16 33 H -0.25 -0.60 7.11 56.52 0.40 -0.20 16 34 H 0.07 0.20 8.14 -51.93 -0.42 -0.22 16 35 H 0.06 0.10 7.24 -51.93 -0.38 -0.27 16 36 H 0.08 0.32 6.48 -51.93 -0.34 -0.01 16 37 H 0.39 -1.99 7.73 -40.82 -0.32 -2.30 16 38 H 0.07 -0.39 8.14 -51.93 -0.42 -0.81 16 39 H 0.08 -0.38 8.14 -51.93 -0.42 -0.80 16 40 H 0.08 -0.21 8.14 -51.92 -0.42 -0.63 16 41 H 0.08 -0.28 8.14 -51.93 -0.42 -0.71 16 42 H 0.08 -0.05 6.50 -51.93 -0.34 -0.39 16 43 H 0.08 -0.05 8.14 -51.92 -0.42 -0.48 16 44 H 0.07 -0.16 8.14 -51.93 -0.42 -0.59 16 45 H 0.08 0.04 8.14 -51.92 -0.42 -0.38 16 46 H 0.42 -2.48 8.19 -40.82 -0.33 -2.82 16 LS Contribution 376.48 15.07 5.67 5.67 Total: 0.00 -9.01 376.48 -8.40 -17.42 By element: Atomic # 1 Polarization: -9.70 SS G_CDS: -6.12 Total: -15.82 kcal Atomic # 6 Polarization: 2.07 SS G_CDS: -2.04 Total: 0.03 kcal Atomic # 7 Polarization: 2.86 SS G_CDS: -0.31 Total: 2.55 kcal Atomic # 8 Polarization: -3.29 SS G_CDS: -0.74 Total: -4.03 kcal Atomic # 9 Polarization: -0.59 SS G_CDS: 0.11 Total: -0.47 kcal Atomic # 14 Polarization: -0.37 SS G_CDS: -4.98 Total: -5.35 kcal Total LS contribution 5.67 Total: 5.67 kcal Total: -9.01 -8.40 -17.42 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17849236_12297754.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -229.347 kcal (2) G-P(sol) polarization free energy of solvation -9.014 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -238.361 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.405 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.419 kcal (6) G-S(sol) free energy of system = (1) + (5) -246.766 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds