Wall clock time and date at job start Sun Mar 7 2021 15:00:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.35456 * 125.56466 * 2 1 4 4 C 1.50700 * 126.06573 * 359.94714 * 3 2 1 5 5 O 1.42908 * 109.46822 * 296.46104 * 4 3 2 6 6 Si 1.86295 * 109.47336 * 56.46390 * 4 3 2 7 7 C 1.39835 * 107.86541 * 179.97438 * 3 2 1 8 8 C 1.50698 * 126.45853 * 180.02562 * 7 3 2 9 9 C 1.37875 * 107.08243 * 359.97438 * 7 3 2 10 10 C 1.46680 * 126.22961 * 179.97438 * 9 7 3 11 11 O 1.21691 * 120.00107 * 0.02562 * 10 9 7 12 12 N 1.34778 * 119.99645 * 180.02562 * 10 9 7 13 13 C 1.46503 * 119.99553 * 180.02562 * 12 10 9 14 14 H 1.08998 * 109.47309 * 34.99801 * 13 12 10 15 15 C 1.53003 * 109.46918 * 154.99898 * 13 12 10 16 16 C 1.53001 * 109.46954 * 179.97438 * 15 13 12 17 17 C 1.52996 * 109.47604 * 300.00241 * 16 15 13 18 18 H 1.08998 * 109.47064 * 299.99789 * 17 16 15 19 19 O 1.42899 * 109.47309 * 179.97438 * 17 16 15 20 20 C 1.42901 * 113.99824 * 149.99636 * 19 17 16 21 21 F 1.39907 * 109.47124 * 60.00314 * 20 19 17 22 22 F 1.39906 * 109.46872 * 179.97438 * 20 19 17 23 23 F 1.39896 * 109.47625 * 300.00009 * 20 19 17 24 24 C 1.52999 * 109.47330 * 59.99560 * 17 16 15 25 25 C 1.52999 * 109.46893 * 274.99460 * 13 12 10 26 26 N 1.35532 * 125.56423 * 180.22850 * 2 1 3 27 27 H 1.08996 * 109.47131 * 94.30310 * 1 2 3 28 28 H 1.08997 * 109.47206 * 214.30436 * 1 2 3 29 29 H 1.08998 * 109.46775 * 334.30331 * 1 2 3 30 30 H 1.08998 * 109.47253 * 176.46842 * 4 3 2 31 31 H 0.96699 * 113.99498 * 60.00743 * 5 4 3 32 32 H 1.48499 * 109.99916 * 63.73024 * 6 4 3 33 33 H 1.48503 * 110.00039 * 185.04740 * 6 4 3 34 34 H 1.08996 * 109.46981 * 269.98543 * 8 7 3 35 35 H 1.09000 * 109.46584 * 29.98590 * 8 7 3 36 36 H 1.09001 * 109.46889 * 149.98395 * 8 7 3 37 37 H 0.96992 * 120.00431 * 0.02562 * 12 10 9 38 38 H 1.08998 * 109.47210 * 59.99842 * 15 13 12 39 39 H 1.08997 * 109.46888 * 299.99641 * 15 13 12 40 40 H 1.09008 * 109.46741 * 60.00212 * 16 15 13 41 41 H 1.08998 * 109.47136 * 180.02562 * 16 15 13 42 42 H 1.08999 * 109.47747 * 179.97438 * 24 17 16 43 43 H 1.09008 * 109.46873 * 60.00116 * 24 17 16 44 44 H 1.08998 * 109.47421 * 300.00272 * 25 13 12 45 45 H 1.09008 * 109.46869 * 60.00194 * 25 13 12 46 46 H 0.97001 * 125.67552 * 0.06955 * 26 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2949 1.1019 0.0000 4 6 1.8200 2.5321 -0.0011 5 8 1.1010 2.7943 -1.2080 6 14 0.7022 2.8165 1.4619 7 6 3.6270 0.6768 0.0006 8 6 4.8486 1.5592 0.0014 9 6 3.6122 -0.7019 0.0015 10 6 4.7860 -1.5815 0.0019 11 8 5.9049 -1.1031 0.0018 12 7 4.6252 -2.9197 0.0023 13 6 5.7976 -3.7982 0.0032 14 1 6.5929 -3.3422 0.5928 15 6 5.4214 -5.1500 0.6132 16 6 6.6457 -6.0677 0.6136 17 6 7.1294 -6.2734 -0.8233 18 1 6.3339 -6.7293 -1.4127 19 8 8.2732 -7.1301 -0.8228 20 6 8.4077 -7.9206 -2.0056 21 9 8.5221 -7.0799 -3.1180 22 9 9.5523 -8.7189 -1.9052 23 9 7.2808 -8.7367 -2.1518 24 6 7.5055 -4.9217 -1.4333 25 6 6.2817 -4.0040 -1.4335 26 7 2.2953 -1.1025 -0.0044 27 1 -0.3633 -0.0771 -1.0247 28 1 -0.3633 -0.8489 0.5792 29 1 -0.3633 0.9260 0.4456 30 1 2.6788 3.2002 0.0625 31 1 0.3219 2.2348 -1.3311 32 1 1.4623 2.6347 2.7246 33 1 0.1307 4.1860 1.4058 34 1 5.1438 1.7719 -1.0261 35 1 4.6216 2.4934 0.5150 36 1 5.6639 1.0505 0.5158 37 1 3.7334 -3.3011 0.0020 38 1 4.6262 -5.6060 0.0236 39 1 5.0766 -5.0033 1.6367 40 1 7.4413 -5.6118 1.2030 41 1 6.3776 -7.0309 1.0477 42 1 7.8506 -5.0682 -2.4568 43 1 8.3011 -4.4658 -0.8438 44 1 5.4864 -4.4600 -2.0231 45 1 6.5497 -3.0409 -1.8681 46 1 1.9833 -2.0210 -0.0090 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17849236_12297754.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 15:00:25 Heat of formation + Delta-G solvation = -248.232590 kcal Electronic energy + Delta-G solvation = -33479.750180 eV Core-core repulsion = 28341.474450 eV Total energy + Delta-G solvation = -5138.275731 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 363.149 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -51.27926 -49.03325 -48.96267 -42.68188 -41.04472 -39.94305 -37.97488 -37.72235 -35.10656 -33.91165 -32.72697 -32.01957 -30.21422 -29.23687 -27.53814 -26.61161 -26.01703 -24.04254 -23.63888 -22.22059 -21.54054 -20.68513 -20.54152 -20.28112 -19.99033 -19.76191 -19.24858 -17.74278 -17.41992 -16.88342 -16.66897 -16.53064 -16.12890 -15.86296 -15.76504 -15.74431 -15.50415 -15.44193 -15.39078 -15.16658 -15.15550 -15.06936 -14.71909 -14.61959 -14.41075 -14.22441 -14.10630 -13.98605 -13.93808 -13.61051 -13.37956 -13.21662 -13.11175 -13.01914 -12.79826 -12.63025 -12.38032 -12.29326 -12.15044 -12.09334 -11.64495 -11.27940 -11.10783 -10.53667 -10.25851 -9.55007 -8.98250 -4.99387 0.35354 0.78298 1.22518 1.53783 1.75504 1.89091 2.01421 2.03401 2.14485 2.25559 2.91921 3.01869 3.43999 3.48012 3.67057 3.73632 3.79488 3.86750 3.88615 3.94220 3.98849 4.03295 4.03970 4.20057 4.31884 4.34427 4.42280 4.52775 4.59329 4.60900 4.71169 4.72611 4.87543 4.90643 4.92692 4.98780 5.01017 5.02292 5.04793 5.15452 5.20986 5.26619 5.33057 5.38907 5.71552 5.80533 6.38875 6.57579 6.83771 7.09537 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.101 4.101 2 C 0.092 3.908 3 C -0.232 4.232 4 C -0.039 4.039 5 O -0.557 6.557 6 Si 0.770 3.230 7 C -0.083 4.083 8 C -0.091 4.091 9 C -0.077 4.077 10 C 0.589 3.411 11 O -0.566 6.566 12 N -0.711 5.711 13 C 0.144 3.856 14 H 0.072 0.928 15 C -0.112 4.112 16 C -0.108 4.108 17 C 0.079 3.921 18 H 0.098 0.902 19 O -0.375 6.375 20 C 0.596 3.404 21 F -0.176 7.176 22 F -0.150 7.150 23 F -0.173 7.173 24 C -0.142 4.142 25 C -0.119 4.119 26 N -0.515 5.515 27 H 0.111 0.889 28 H 0.107 0.893 29 H 0.098 0.902 30 H 0.093 0.907 31 H 0.389 0.611 32 H -0.301 1.301 33 H -0.292 1.292 34 H 0.061 0.939 35 H 0.064 0.936 36 H 0.065 0.935 37 H 0.412 0.588 38 H 0.097 0.903 39 H 0.095 0.905 40 H 0.075 0.925 41 H 0.096 0.904 42 H 0.074 0.926 43 H 0.071 0.929 44 H 0.085 0.915 45 H 0.054 0.946 46 H 0.435 0.565 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.748 -5.658 1.354 12.222 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.157 4.157 2 C -0.028 4.028 3 C -0.238 4.238 4 C -0.149 4.149 5 O -0.365 6.365 6 Si 0.676 3.324 7 C -0.091 4.091 8 C -0.148 4.148 9 C -0.189 4.189 10 C 0.378 3.622 11 O -0.446 6.446 12 N -0.363 5.363 13 C 0.040 3.960 14 H 0.090 0.910 15 C -0.150 4.150 16 C -0.146 4.146 17 C 0.024 3.976 18 H 0.116 0.884 19 O -0.299 6.299 20 C 0.504 3.496 21 F -0.159 7.159 22 F -0.131 7.131 23 F -0.156 7.156 24 C -0.181 4.181 25 C -0.158 4.158 26 N -0.113 5.113 27 H 0.130 0.870 28 H 0.126 0.874 29 H 0.115 0.885 30 H 0.110 0.890 31 H 0.239 0.761 32 H -0.229 1.229 33 H -0.220 1.220 34 H 0.080 0.920 35 H 0.083 0.917 36 H 0.084 0.916 37 H 0.248 0.752 38 H 0.116 0.884 39 H 0.114 0.886 40 H 0.094 0.906 41 H 0.114 0.886 42 H 0.093 0.907 43 H 0.089 0.911 44 H 0.103 0.897 45 H 0.073 0.927 46 H 0.277 0.723 Dipole moment (debyes) X Y Z Total from point charges -9.508 -4.663 2.103 10.796 hybrid contribution 0.946 -0.250 -0.683 1.193 sum -8.562 -4.913 1.420 9.973 Atomic orbital electron populations 1.20874 0.83884 1.05097 1.05830 1.20772 0.95304 0.84653 1.02117 1.19573 0.92564 0.95700 1.15943 1.24468 1.00420 0.92969 0.97064 1.86504 1.44725 1.64001 1.41308 0.94311 0.83374 0.81871 0.72868 1.19977 0.95356 0.92015 1.01793 1.20286 0.94810 0.97924 1.01795 1.19845 0.84003 0.93397 1.21624 1.17184 0.87115 0.82241 0.75669 1.90825 1.25862 1.75863 1.52001 1.45711 1.10608 1.04574 1.75368 1.21055 0.87960 0.90679 0.96356 0.91024 1.21733 0.97899 0.91963 1.03381 1.21555 0.98346 1.01873 0.92812 1.22849 0.85093 0.88812 1.00833 0.88390 1.88377 1.50643 1.55759 1.35122 1.19556 0.74550 0.77105 0.78396 1.93264 1.95827 1.71555 1.55223 1.93269 1.50507 1.73403 1.95926 1.93259 1.52771 1.73964 1.95578 1.22105 0.99130 0.94614 1.02207 1.21784 0.97581 0.99283 0.97131 1.41663 1.03841 1.09360 1.56480 0.87037 0.87414 0.88473 0.88978 0.76074 1.22893 1.22000 0.92033 0.91736 0.91600 0.75177 0.88401 0.88626 0.90606 0.88589 0.90695 0.91066 0.89662 0.92723 0.72328 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 1.57 8.94 71.24 0.64 2.21 16 2 C 0.09 -0.55 6.75 41.35 0.28 -0.27 16 3 C -0.23 -0.39 4.67 -20.12 -0.09 -0.49 16 4 C -0.04 -0.08 2.89 71.24 0.21 0.13 16 5 O -0.56 -0.83 12.88 -148.98 -1.92 -2.75 16 6 Si 0.77 -0.80 29.29 68.60 2.01 1.21 16 7 C -0.08 -0.56 6.21 -19.56 -0.12 -0.68 16 8 C -0.09 -0.82 9.53 71.24 0.68 -0.15 16 9 C -0.08 -0.20 7.06 40.35 0.28 0.08 16 10 C 0.59 2.62 7.75 86.45 0.67 3.29 16 11 O -0.57 -7.54 14.46 -4.32 -0.06 -7.60 16 12 N -0.71 3.15 5.07 -446.49 -2.27 0.88 16 13 C 0.14 -0.54 2.45 44.99 0.11 -0.43 16 14 H 0.07 0.14 7.58 -2.39 -0.02 0.12 16 15 C -0.11 1.10 5.39 30.60 0.16 1.27 16 16 C -0.11 0.73 5.57 30.59 0.17 0.90 16 17 C 0.08 -0.28 2.40 30.59 0.07 -0.20 16 18 H 0.10 -0.62 7.20 -2.39 -0.02 -0.63 16 19 O -0.37 -0.48 10.24 -148.98 -1.52 -2.01 16 20 C 0.60 1.14 3.71 113.37 0.42 1.56 16 21 F -0.18 -0.44 15.44 44.97 0.69 0.26 16 22 F -0.15 -0.64 17.53 44.97 0.79 0.15 16 23 F -0.17 -0.17 16.61 44.97 0.75 0.58 16 24 C -0.14 0.21 5.39 30.58 0.16 0.37 16 25 C -0.12 0.29 5.49 30.58 0.17 0.45 16 26 N -0.51 3.40 5.99 -171.93 -1.03 2.37 16 27 H 0.11 -2.09 8.14 -2.39 -0.02 -2.11 16 28 H 0.11 -2.12 8.14 -2.39 -0.02 -2.14 16 29 H 0.10 -1.63 4.06 -2.39 -0.01 -1.64 16 30 H 0.09 0.51 6.77 -2.39 -0.02 0.49 16 31 H 0.39 -3.23 7.37 -74.06 -0.55 -3.78 16 32 H -0.30 -1.96 7.11 99.48 0.71 -1.26 16 33 H -0.29 -1.65 7.11 99.48 0.71 -0.94 16 34 H 0.06 0.60 8.14 -2.39 -0.02 0.58 16 35 H 0.06 0.45 7.24 -2.39 -0.02 0.43 16 36 H 0.07 0.80 6.48 -2.39 -0.02 0.78 16 37 H 0.41 -4.95 7.73 -92.71 -0.72 -5.67 16 38 H 0.10 -1.36 8.14 -2.39 -0.02 -1.38 16 39 H 0.10 -1.07 8.14 -2.39 -0.02 -1.09 16 40 H 0.08 -0.35 8.14 -2.38 -0.02 -0.37 16 41 H 0.10 -0.81 8.14 -2.39 -0.02 -0.83 16 42 H 0.07 -0.01 6.50 -2.39 -0.02 -0.02 16 43 H 0.07 0.07 8.14 -2.38 -0.02 0.05 16 44 H 0.08 -0.49 8.14 -2.39 -0.02 -0.51 16 45 H 0.05 0.19 8.14 -2.38 -0.02 0.17 16 46 H 0.44 -6.48 8.19 -92.71 -0.76 -7.24 16 Total: 0.00 -26.17 376.48 0.34 -25.84 By element: Atomic # 1 Polarization: -26.06 SS G_CDS: -0.91 Total: -26.97 kcal Atomic # 6 Polarization: 4.24 SS G_CDS: 3.81 Total: 8.05 kcal Atomic # 7 Polarization: 6.55 SS G_CDS: -3.30 Total: 3.26 kcal Atomic # 8 Polarization: -8.86 SS G_CDS: -3.51 Total: -12.36 kcal Atomic # 9 Polarization: -1.25 SS G_CDS: 2.23 Total: 0.98 kcal Atomic # 14 Polarization: -0.80 SS G_CDS: 2.01 Total: 1.21 kcal Total: -26.17 0.34 -25.84 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17849236_12297754.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -222.397 kcal (2) G-P(sol) polarization free energy of solvation -26.174 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -248.571 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.338 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.836 kcal (6) G-S(sol) free energy of system = (1) + (5) -248.233 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.20 seconds