Wall clock time and date at job start Sun Mar 7 2021 15:00:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86301 * 109.47259 * 2 1 4 4 C 1.50697 * 109.46996 * 120.00351 * 2 1 3 5 5 C 1.38238 * 120.00008 * 244.72486 * 4 2 1 6 6 C 1.38233 * 120.00357 * 179.76353 * 5 4 2 7 7 C 1.38238 * 119.99628 * 0.50677 * 6 5 4 8 8 C 1.50699 * 119.99660 * 179.72044 * 7 6 5 9 9 C 1.50699 * 109.47238 * 270.02279 * 8 7 6 10 10 O 1.21279 * 120.00429 * 0.02562 * 9 8 7 11 11 N 1.34777 * 119.99906 * 180.02562 * 9 8 7 12 12 C 1.46502 * 120.00077 * 180.02562 * 11 9 8 13 13 H 1.08998 * 109.47278 * 325.00007 * 12 11 9 14 14 C 1.53000 * 109.47006 * 84.99999 * 12 11 9 15 15 C 1.52995 * 109.47173 * 180.02562 * 14 12 11 16 16 C 1.52998 * 109.47401 * 299.99810 * 15 14 12 17 17 H 1.09001 * 109.47545 * 300.00349 * 16 15 14 18 18 O 1.42893 * 109.47598 * 179.97438 * 16 15 14 19 19 C 1.42901 * 114.00288 * 90.00260 * 18 16 15 20 20 F 1.39897 * 109.46663 * 59.99856 * 19 18 16 21 21 F 1.39891 * 109.47448 * 180.02562 * 19 18 16 22 22 F 1.39902 * 109.46714 * 300.00357 * 19 18 16 23 23 C 1.53000 * 109.46802 * 59.99963 * 16 15 14 24 24 C 1.52996 * 109.47166 * 204.99916 * 12 11 9 25 25 C 1.38237 * 120.00127 * 359.74869 * 7 6 5 26 26 C 1.38233 * 119.99771 * 359.97438 * 25 7 6 27 27 H 0.96696 * 114.00036 * 299.99991 * 1 2 3 28 28 H 1.09001 * 109.47103 * 239.99639 * 2 1 3 29 29 H 1.48497 * 109.99842 * 299.99834 * 3 2 1 30 30 H 1.48498 * 109.99736 * 61.31824 * 3 2 1 31 31 H 1.07998 * 119.99418 * 0.02562 * 5 4 2 32 32 H 1.08000 * 120.00450 * 180.23285 * 6 5 4 33 33 H 1.09001 * 109.47454 * 30.02863 * 8 7 6 34 34 H 1.09003 * 109.46811 * 150.02468 * 8 7 6 35 35 H 0.97005 * 120.00134 * 359.97438 * 11 9 8 36 36 H 1.08997 * 109.47191 * 300.00004 * 14 12 11 37 37 H 1.08998 * 109.47095 * 59.99896 * 14 12 11 38 38 H 1.09002 * 109.47649 * 179.97438 * 15 14 12 39 39 H 1.08998 * 109.47220 * 59.99942 * 15 14 12 40 40 H 1.09006 * 109.47311 * 180.02562 * 23 16 15 41 41 H 1.09007 * 109.47588 * 59.99995 * 23 16 15 42 42 H 1.09001 * 109.47600 * 300.00311 * 24 12 11 43 43 H 1.09000 * 109.47050 * 60.00387 * 24 12 11 44 44 H 1.07992 * 119.99739 * 179.97438 * 25 7 6 45 45 H 1.08004 * 119.99864 * 179.97438 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 2.6436 -0.0136 2.1885 6 6 3.1002 -0.6642 3.3195 7 6 2.8535 -2.0140 3.4874 8 6 3.3567 -2.7246 4.7174 9 6 4.7381 -3.2665 4.4547 10 8 5.2627 -3.0924 3.3752 11 7 5.3907 -3.9446 5.4195 12 6 6.7339 -4.4709 5.1643 13 1 6.8073 -4.7911 4.1250 14 6 7.7699 -3.3782 5.4358 15 6 9.1726 -3.9276 5.1687 16 6 9.4368 -5.1208 6.0892 17 1 9.3637 -4.8010 7.1287 18 8 10.7466 -5.6343 5.8394 19 6 11.7677 -5.0378 6.6417 20 9 11.4878 -5.2609 7.9941 21 9 13.0048 -5.6067 6.3210 22 9 11.8099 -3.6614 6.3950 23 6 8.4008 -6.2135 5.8178 24 6 6.9977 -5.6638 6.0853 25 6 2.1458 -2.7120 2.5268 26 6 1.6843 -2.0601 1.3986 27 1 -0.3933 0.4417 0.7650 28 1 1.7924 -0.5139 -0.8900 29 1 1.5616 2.4678 -1.2085 30 1 1.5880 2.4585 1.2242 31 1 2.8398 1.0400 2.0554 32 1 3.6535 -0.1190 4.0699 33 1 3.3936 -2.0244 5.5520 34 1 2.6844 -3.5468 4.9625 35 1 4.9713 -4.0835 6.2831 36 1 7.5820 -2.5283 4.7797 37 1 7.6964 -3.0580 6.4751 38 1 9.9106 -3.1491 5.3616 39 1 9.2457 -4.2475 4.1292 40 1 8.5888 -7.0634 6.4739 41 1 8.4739 -6.5334 4.7782 42 1 6.9242 -5.3437 7.1246 43 1 6.2597 -6.4423 5.8919 44 1 1.9534 -3.7666 2.6578 45 1 1.1317 -2.6056 0.6478 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17849236_12335836.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 15:00:37 Heat of formation + Delta-G solvation = -259.517218 kcal Electronic energy + Delta-G solvation = -31985.390208 eV Core-core repulsion = 26939.362529 eV Total energy + Delta-G solvation = -5046.027680 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.138 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -51.19075 -48.92593 -48.88377 -41.44327 -40.65130 -39.89514 -38.07983 -37.59760 -34.88066 -34.04758 -32.14686 -31.92949 -30.72893 -29.17840 -26.40258 -25.69022 -24.15261 -23.81227 -23.63573 -22.11350 -21.61508 -21.14596 -20.41191 -19.91178 -19.68727 -18.53205 -18.16062 -17.71101 -17.04513 -16.88596 -16.48699 -16.28937 -16.14541 -16.07077 -15.78314 -15.64613 -15.57681 -15.38552 -15.29338 -15.08900 -15.02628 -14.93101 -14.80582 -14.66302 -14.46480 -14.41457 -13.96851 -13.90293 -13.51237 -13.32829 -13.25392 -13.13293 -12.83402 -12.77590 -12.42759 -12.25350 -12.22734 -11.96864 -11.75976 -11.54887 -11.33069 -10.90602 -10.54691 -10.16085 -9.84571 -9.62062 -4.91977 0.25192 0.48500 0.82053 1.31850 1.60779 1.61275 1.95942 1.98063 2.09442 2.77394 2.97666 3.07059 3.33135 3.37968 3.40622 3.55495 3.66587 3.69886 3.75193 3.81218 3.83076 3.88069 3.94727 4.03259 4.10236 4.17267 4.21233 4.32983 4.36115 4.45622 4.47356 4.58818 4.61366 4.69937 4.73611 4.84585 4.89970 4.96764 5.01788 5.03917 5.08466 5.24047 5.36765 5.39887 5.56316 5.59172 6.01410 6.38976 6.42938 7.17981 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.075 4.075 3 Si 0.686 3.314 4 C -0.116 4.116 5 C -0.116 4.116 6 C -0.100 4.100 7 C -0.063 4.063 8 C -0.104 4.104 9 C 0.515 3.485 10 O -0.523 6.523 11 N -0.731 5.731 12 C 0.141 3.859 13 H 0.094 0.906 14 C -0.125 4.125 15 C -0.145 4.145 16 C 0.083 3.917 17 H 0.083 0.917 18 O -0.367 6.367 19 C 0.594 3.406 20 F -0.176 7.176 21 F -0.141 7.141 22 F -0.174 7.174 23 C -0.110 4.110 24 C -0.123 4.123 25 C -0.104 4.104 26 C -0.090 4.090 27 H 0.375 0.625 28 H 0.118 0.882 29 H -0.257 1.257 30 H -0.261 1.261 31 H 0.126 0.874 32 H 0.124 0.876 33 H 0.105 0.895 34 H 0.104 0.896 35 H 0.401 0.599 36 H 0.079 0.921 37 H 0.068 0.932 38 H 0.081 0.919 39 H 0.083 0.917 40 H 0.084 0.916 41 H 0.084 0.916 42 H 0.074 0.926 43 H 0.083 0.917 44 H 0.122 0.878 45 H 0.125 0.875 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.363 -0.945 5.008 5.275 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.336 6.336 2 C -0.185 4.185 3 Si 0.588 3.412 4 C -0.117 4.117 5 C -0.134 4.134 6 C -0.118 4.118 7 C -0.064 4.064 8 C -0.144 4.144 9 C 0.301 3.699 10 O -0.398 6.398 11 N -0.383 5.383 12 C 0.037 3.963 13 H 0.112 0.888 14 C -0.164 4.164 15 C -0.183 4.183 16 C 0.028 3.972 17 H 0.101 0.899 18 O -0.290 6.290 19 C 0.502 3.498 20 F -0.158 7.158 21 F -0.123 7.123 22 F -0.156 7.156 23 C -0.148 4.148 24 C -0.161 4.161 25 C -0.122 4.122 26 C -0.108 4.108 27 H 0.223 0.777 28 H 0.136 0.864 29 H -0.183 1.183 30 H -0.186 1.186 31 H 0.144 0.856 32 H 0.142 0.858 33 H 0.123 0.877 34 H 0.123 0.877 35 H 0.235 0.765 36 H 0.098 0.902 37 H 0.087 0.913 38 H 0.099 0.901 39 H 0.101 0.899 40 H 0.102 0.898 41 H 0.102 0.898 42 H 0.093 0.907 43 H 0.102 0.898 44 H 0.140 0.860 45 H 0.143 0.857 Dipole moment (debyes) X Y Z Total from point charges -1.049 -0.409 3.539 3.714 hybrid contribution -0.970 -0.104 1.287 1.615 sum -2.019 -0.513 4.826 5.256 Atomic orbital electron populations 1.86604 1.17743 1.79994 1.49263 1.25026 0.83899 1.11031 0.98578 0.94847 0.91800 0.74521 0.80058 1.20253 0.99765 0.95000 0.96650 1.20984 0.98612 0.99576 0.94199 1.20898 0.99242 0.93937 0.97727 1.19265 0.97999 0.93740 0.95350 1.20696 0.94185 1.01637 0.97857 1.20575 0.87296 0.77849 0.84153 1.90766 1.68419 1.56538 1.24083 1.46065 1.17724 1.57619 1.16888 1.21047 0.81287 0.92898 1.01091 0.88828 1.21871 0.92963 0.98960 1.02625 1.22168 0.97915 0.97084 1.01170 1.22652 0.78666 0.95463 1.00446 0.89856 1.88363 1.17598 1.62652 1.60432 1.19569 0.79590 0.74903 0.75717 1.93261 1.93442 1.94413 1.34680 1.93287 1.40929 1.85221 1.92840 1.93265 1.96277 1.32179 1.93926 1.21552 0.91753 0.97111 1.04428 1.21787 0.96514 0.97676 1.00127 1.21011 0.97830 0.99600 0.93747 1.20968 0.98692 0.93734 0.97439 0.77739 0.86445 1.18257 1.18554 0.85620 0.85848 0.87705 0.87729 0.76471 0.90232 0.91329 0.90085 0.89860 0.89786 0.89754 0.90707 0.89795 0.86006 0.85657 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.97 12.83 -35.23 -0.45 -1.42 16 2 C -0.08 -0.05 2.80 36.00 0.10 0.05 16 3 Si 0.69 -0.12 29.88 -169.99 -5.08 -5.20 16 4 C -0.12 -0.13 5.35 -104.63 -0.56 -0.69 16 5 C -0.12 -0.07 8.67 -39.58 -0.34 -0.42 16 6 C -0.10 -0.04 9.70 -39.58 -0.38 -0.43 16 7 C -0.06 -0.02 4.37 -104.62 -0.46 -0.48 16 8 C -0.10 0.26 5.83 -29.04 -0.17 0.09 16 9 C 0.52 -0.19 7.79 -10.99 -0.09 -0.28 16 10 O -0.52 -2.15 15.70 5.56 0.09 -2.07 16 11 N -0.73 2.22 5.08 -53.81 -0.27 1.95 16 12 C 0.14 -0.33 2.45 -67.93 -0.17 -0.50 16 13 H 0.09 -0.01 7.58 -51.93 -0.39 -0.41 16 14 C -0.13 0.24 5.49 -26.73 -0.15 0.09 16 15 C -0.15 0.20 5.39 -26.73 -0.14 0.06 16 16 C 0.08 -0.14 2.40 -26.73 -0.06 -0.20 16 17 H 0.08 -0.20 7.20 -51.93 -0.37 -0.58 16 18 O -0.37 -0.20 10.23 -35.23 -0.36 -0.56 16 19 C 0.59 0.49 3.71 101.05 0.37 0.87 16 20 F -0.18 -0.13 16.61 2.25 0.04 -0.09 16 21 F -0.14 -0.26 17.53 2.25 0.04 -0.22 16 22 F -0.17 -0.16 15.44 2.25 0.03 -0.12 16 23 C -0.11 0.32 5.57 -26.70 -0.15 0.18 16 24 C -0.12 0.51 5.40 -26.70 -0.14 0.37 16 25 C -0.10 -0.09 9.70 -39.58 -0.38 -0.47 16 26 C -0.09 -0.13 9.69 -39.58 -0.38 -0.51 16 27 H 0.38 -0.41 8.70 45.56 0.40 -0.01 16 28 H 0.12 0.02 7.96 -51.93 -0.41 -0.39 16 29 H -0.26 -0.78 7.11 56.52 0.40 -0.37 16 30 H -0.26 -0.37 7.01 56.52 0.40 0.02 16 31 H 0.13 -0.11 4.85 -52.49 -0.25 -0.37 16 32 H 0.12 -0.16 8.06 -52.49 -0.42 -0.58 16 33 H 0.10 -0.48 8.09 -51.93 -0.42 -0.90 16 34 H 0.10 -0.47 8.09 -51.93 -0.42 -0.89 16 35 H 0.40 -2.34 8.60 -40.82 -0.35 -2.70 16 36 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 37 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 38 H 0.08 -0.07 6.50 -51.93 -0.34 -0.41 16 39 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 40 H 0.08 -0.27 8.14 -51.93 -0.42 -0.70 16 41 H 0.08 -0.20 8.14 -51.92 -0.42 -0.63 16 42 H 0.07 -0.39 8.14 -51.93 -0.42 -0.81 16 43 H 0.08 -0.38 8.14 -51.93 -0.42 -0.80 16 44 H 0.12 -0.08 8.06 -52.49 -0.42 -0.50 16 45 H 0.13 0.11 8.06 -52.48 -0.42 -0.31 16 LS Contribution 380.48 15.07 5.73 5.73 Total: 0.00 -7.78 380.48 -9.34 -17.12 By element: Atomic # 1 Polarization: -6.85 SS G_CDS: -6.00 Total: -12.85 kcal Atomic # 6 Polarization: 0.84 SS G_CDS: -3.11 Total: -2.26 kcal Atomic # 7 Polarization: 2.22 SS G_CDS: -0.27 Total: 1.95 kcal Atomic # 8 Polarization: -3.32 SS G_CDS: -0.73 Total: -4.04 kcal Atomic # 9 Polarization: -0.55 SS G_CDS: 0.11 Total: -0.44 kcal Atomic # 14 Polarization: -0.12 SS G_CDS: -5.08 Total: -5.20 kcal Total LS contribution 5.73 Total: 5.73 kcal Total: -7.78 -9.34 -17.12 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17849236_12335836.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -242.397 kcal (2) G-P(sol) polarization free energy of solvation -7.784 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -250.182 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.336 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.120 kcal (6) G-S(sol) free energy of system = (1) + (5) -259.517 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds