Wall clock time and date at job start Sun Mar 7 2021 15:00:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86301 * 109.47259 * 2 1 4 4 C 1.50697 * 109.46996 * 120.00351 * 2 1 3 5 5 C 1.38238 * 120.00008 * 244.72486 * 4 2 1 6 6 C 1.38233 * 120.00357 * 179.76353 * 5 4 2 7 7 C 1.38238 * 119.99628 * 0.50677 * 6 5 4 8 8 C 1.50699 * 119.99660 * 179.72044 * 7 6 5 9 9 C 1.50699 * 109.47238 * 270.02279 * 8 7 6 10 10 O 1.21279 * 120.00429 * 0.02562 * 9 8 7 11 11 N 1.34777 * 119.99906 * 180.02562 * 9 8 7 12 12 C 1.46502 * 120.00077 * 180.02562 * 11 9 8 13 13 H 1.08998 * 109.47278 * 325.00007 * 12 11 9 14 14 C 1.53000 * 109.47006 * 84.99999 * 12 11 9 15 15 C 1.52995 * 109.47173 * 180.02562 * 14 12 11 16 16 C 1.52998 * 109.47401 * 299.99810 * 15 14 12 17 17 H 1.09001 * 109.47545 * 300.00349 * 16 15 14 18 18 O 1.42893 * 109.47598 * 179.97438 * 16 15 14 19 19 C 1.42901 * 114.00288 * 90.00260 * 18 16 15 20 20 F 1.39897 * 109.46663 * 59.99856 * 19 18 16 21 21 F 1.39891 * 109.47448 * 180.02562 * 19 18 16 22 22 F 1.39902 * 109.46714 * 300.00357 * 19 18 16 23 23 C 1.53000 * 109.46802 * 59.99963 * 16 15 14 24 24 C 1.52996 * 109.47166 * 204.99916 * 12 11 9 25 25 C 1.38237 * 120.00127 * 359.74869 * 7 6 5 26 26 C 1.38233 * 119.99771 * 359.97438 * 25 7 6 27 27 H 0.96696 * 114.00036 * 299.99991 * 1 2 3 28 28 H 1.09001 * 109.47103 * 239.99639 * 2 1 3 29 29 H 1.48497 * 109.99842 * 299.99834 * 3 2 1 30 30 H 1.48498 * 109.99736 * 61.31824 * 3 2 1 31 31 H 1.07998 * 119.99418 * 0.02562 * 5 4 2 32 32 H 1.08000 * 120.00450 * 180.23285 * 6 5 4 33 33 H 1.09001 * 109.47454 * 30.02863 * 8 7 6 34 34 H 1.09003 * 109.46811 * 150.02468 * 8 7 6 35 35 H 0.97005 * 120.00134 * 359.97438 * 11 9 8 36 36 H 1.08997 * 109.47191 * 300.00004 * 14 12 11 37 37 H 1.08998 * 109.47095 * 59.99896 * 14 12 11 38 38 H 1.09002 * 109.47649 * 179.97438 * 15 14 12 39 39 H 1.08998 * 109.47220 * 59.99942 * 15 14 12 40 40 H 1.09006 * 109.47311 * 180.02562 * 23 16 15 41 41 H 1.09007 * 109.47588 * 59.99995 * 23 16 15 42 42 H 1.09001 * 109.47600 * 300.00311 * 24 12 11 43 43 H 1.09000 * 109.47050 * 60.00387 * 24 12 11 44 44 H 1.07992 * 119.99739 * 179.97438 * 25 7 6 45 45 H 1.08004 * 119.99864 * 179.97438 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 2.6436 -0.0136 2.1885 6 6 3.1002 -0.6642 3.3195 7 6 2.8535 -2.0140 3.4874 8 6 3.3567 -2.7246 4.7174 9 6 4.7381 -3.2665 4.4547 10 8 5.2627 -3.0924 3.3752 11 7 5.3907 -3.9446 5.4195 12 6 6.7339 -4.4709 5.1643 13 1 6.8073 -4.7911 4.1250 14 6 7.7699 -3.3782 5.4358 15 6 9.1726 -3.9276 5.1687 16 6 9.4368 -5.1208 6.0892 17 1 9.3637 -4.8010 7.1287 18 8 10.7466 -5.6343 5.8394 19 6 11.7677 -5.0378 6.6417 20 9 11.4878 -5.2609 7.9941 21 9 13.0048 -5.6067 6.3210 22 9 11.8099 -3.6614 6.3950 23 6 8.4008 -6.2135 5.8178 24 6 6.9977 -5.6638 6.0853 25 6 2.1458 -2.7120 2.5268 26 6 1.6843 -2.0601 1.3986 27 1 -0.3933 0.4417 0.7650 28 1 1.7924 -0.5139 -0.8900 29 1 1.5616 2.4678 -1.2085 30 1 1.5880 2.4585 1.2242 31 1 2.8398 1.0400 2.0554 32 1 3.6535 -0.1190 4.0699 33 1 3.3936 -2.0244 5.5520 34 1 2.6844 -3.5468 4.9625 35 1 4.9713 -4.0835 6.2831 36 1 7.5820 -2.5283 4.7797 37 1 7.6964 -3.0580 6.4751 38 1 9.9106 -3.1491 5.3616 39 1 9.2457 -4.2475 4.1292 40 1 8.5888 -7.0634 6.4739 41 1 8.4739 -6.5334 4.7782 42 1 6.9242 -5.3437 7.1246 43 1 6.2597 -6.4423 5.8919 44 1 1.9534 -3.7666 2.6578 45 1 1.1317 -2.6056 0.6478 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17849236_12335836.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 15:00:36 Heat of formation + Delta-G solvation = -257.508703 kcal Electronic energy + Delta-G solvation = -31985.303113 eV Core-core repulsion = 26939.362529 eV Total energy + Delta-G solvation = -5045.940584 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.138 amu Computer time = 1.24 seconds Orbital eigenvalues (eV) -51.26014 -49.01559 -48.94155 -41.36134 -40.59724 -39.87729 -38.05092 -37.63489 -34.80926 -34.00410 -31.95955 -31.93075 -30.64535 -29.08166 -26.43005 -25.68577 -23.97813 -23.81461 -23.53224 -22.09235 -21.48331 -21.05293 -20.41430 -19.96976 -19.71437 -18.57879 -18.04300 -17.61879 -17.03179 -16.82502 -16.46116 -16.26107 -16.15905 -16.06836 -15.76340 -15.72726 -15.53265 -15.38021 -15.34485 -15.13579 -15.08271 -14.89338 -14.79675 -14.63435 -14.44216 -14.30784 -13.98056 -13.89574 -13.32425 -13.26288 -13.14506 -13.05173 -12.76140 -12.69011 -12.27722 -12.23176 -12.10047 -11.99330 -11.60375 -11.58534 -11.20651 -10.90678 -10.61165 -10.04281 -9.86719 -9.61917 -4.93984 0.24667 0.46265 0.80906 1.28628 1.55601 1.69365 1.90604 1.99648 2.20437 2.79066 2.94217 3.04212 3.40580 3.49432 3.52398 3.62840 3.79782 3.84897 3.86487 3.90932 3.95322 4.06203 4.09434 4.11700 4.26396 4.36936 4.38290 4.47256 4.51114 4.55608 4.63702 4.65556 4.73320 4.76524 4.97051 5.02770 5.04276 5.06755 5.09510 5.12356 5.21825 5.37668 5.39009 5.53976 5.54561 5.60146 6.02774 6.46497 6.61627 7.33498 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.548 6.548 2 C -0.084 4.084 3 Si 0.763 3.237 4 C -0.125 4.125 5 C -0.125 4.125 6 C -0.111 4.111 7 C -0.070 4.070 8 C -0.099 4.099 9 C 0.514 3.486 10 O -0.576 6.576 11 N -0.715 5.715 12 C 0.142 3.858 13 H 0.067 0.933 14 C -0.118 4.118 15 C -0.143 4.143 16 C 0.079 3.921 17 H 0.097 0.903 18 O -0.376 6.376 19 C 0.596 3.404 20 F -0.174 7.174 21 F -0.150 7.150 22 F -0.176 7.176 23 C -0.109 4.109 24 C -0.113 4.113 25 C -0.116 4.116 26 C -0.108 4.108 27 H 0.386 0.614 28 H 0.118 0.882 29 H -0.302 1.302 30 H -0.277 1.277 31 H 0.138 0.862 32 H 0.141 0.859 33 H 0.132 0.868 34 H 0.129 0.871 35 H 0.419 0.581 36 H 0.057 0.943 37 H 0.085 0.915 38 H 0.074 0.926 39 H 0.069 0.931 40 H 0.092 0.908 41 H 0.074 0.926 42 H 0.096 0.904 43 H 0.093 0.907 44 H 0.132 0.868 45 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.691 -1.346 7.180 7.498 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.356 6.356 2 C -0.193 4.193 3 Si 0.668 3.332 4 C -0.126 4.126 5 C -0.143 4.143 6 C -0.129 4.129 7 C -0.071 4.071 8 C -0.138 4.138 9 C 0.301 3.699 10 O -0.455 6.455 11 N -0.367 5.367 12 C 0.037 3.963 13 H 0.085 0.915 14 C -0.157 4.157 15 C -0.181 4.181 16 C 0.024 3.976 17 H 0.115 0.885 18 O -0.300 6.300 19 C 0.504 3.496 20 F -0.156 7.156 21 F -0.131 7.131 22 F -0.158 7.158 23 C -0.147 4.147 24 C -0.150 4.150 25 C -0.134 4.134 26 C -0.126 4.126 27 H 0.235 0.765 28 H 0.136 0.864 29 H -0.230 1.230 30 H -0.203 1.203 31 H 0.156 0.844 32 H 0.159 0.841 33 H 0.150 0.850 34 H 0.147 0.853 35 H 0.256 0.744 36 H 0.076 0.924 37 H 0.103 0.897 38 H 0.093 0.907 39 H 0.088 0.912 40 H 0.111 0.889 41 H 0.093 0.907 42 H 0.114 0.886 43 H 0.112 0.888 44 H 0.150 0.850 45 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges -1.385 -0.842 5.769 5.993 hybrid contribution -0.877 0.014 0.598 1.061 sum -2.262 -0.828 6.367 6.808 Atomic orbital electron populations 1.86564 1.18488 1.80446 1.50143 1.25218 0.83458 1.11968 0.98648 0.93936 0.90619 0.72097 0.76528 1.20311 1.00248 0.95051 0.96970 1.21191 0.98542 1.00262 0.94288 1.21222 0.99176 0.94393 0.98061 1.19601 0.97330 0.93931 0.96190 1.20763 0.92944 1.02767 0.97330 1.20970 0.87920 0.77369 0.83640 1.90754 1.69744 1.58698 1.26276 1.45925 1.17235 1.56360 1.17218 1.20965 0.81519 0.93517 1.00254 0.91521 1.21785 0.92648 0.98282 1.02970 1.22114 0.98197 0.97190 1.00588 1.22857 0.78060 0.95723 1.00977 0.88495 1.88375 1.18329 1.62775 1.60531 1.19551 0.79460 0.74785 0.75807 1.93259 1.93405 1.94405 1.34558 1.93264 1.41595 1.85347 1.92921 1.93262 1.96283 1.32308 1.93957 1.21576 0.92029 0.96991 1.04099 1.21737 0.95769 0.96887 1.00655 1.21244 0.98060 1.00277 0.93818 1.21105 0.99360 0.94163 0.97973 0.76513 0.86420 1.23044 1.20346 0.84421 0.84148 0.85020 0.85329 0.74381 0.92432 0.89668 0.90727 0.91226 0.88914 0.90735 0.88583 0.88808 0.84976 0.85934 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -2.58 12.83 -148.98 -1.91 -4.49 16 2 C -0.08 -0.20 2.80 71.23 0.20 0.00 16 3 Si 0.76 0.24 29.88 68.60 2.05 2.29 16 4 C -0.13 -0.40 5.35 -19.87 -0.11 -0.50 16 5 C -0.13 -0.19 8.67 22.27 0.19 0.01 16 6 C -0.11 -0.06 9.70 22.27 0.22 0.15 16 7 C -0.07 -0.01 4.37 -19.87 -0.09 -0.10 16 8 C -0.10 0.66 5.83 29.10 0.17 0.83 16 9 C 0.51 -0.66 7.79 87.66 0.68 0.02 16 10 O -0.58 -5.32 15.70 -3.03 -0.05 -5.37 16 11 N -0.71 5.26 5.08 -442.54 -2.25 3.01 16 12 C 0.14 -0.71 2.45 44.99 0.11 -0.60 16 13 H 0.07 0.07 7.58 -2.39 -0.02 0.05 16 14 C -0.12 0.45 5.49 30.59 0.17 0.61 16 15 C -0.14 0.30 5.39 30.59 0.16 0.47 16 16 C 0.08 -0.28 2.40 30.59 0.07 -0.21 16 17 H 0.10 -0.60 7.20 -2.39 -0.02 -0.62 16 18 O -0.38 -0.48 10.23 -148.98 -1.52 -2.00 16 19 C 0.60 1.07 3.71 113.37 0.42 1.49 16 20 F -0.17 -0.18 16.61 44.97 0.75 0.57 16 21 F -0.15 -0.63 17.53 44.97 0.79 0.16 16 22 F -0.18 -0.37 15.44 44.97 0.69 0.32 16 23 C -0.11 0.72 5.57 30.61 0.17 0.89 16 24 C -0.11 1.12 5.40 30.61 0.17 1.29 16 25 C -0.12 -0.25 9.70 22.27 0.22 -0.04 16 26 C -0.11 -0.44 9.69 22.27 0.22 -0.22 16 27 H 0.39 -0.49 8.70 -74.06 -0.64 -1.14 16 28 H 0.12 0.20 7.96 -2.39 -0.02 0.18 16 29 H -0.30 -2.34 7.11 99.48 0.71 -1.63 16 30 H -0.28 -0.82 7.01 99.48 0.70 -0.13 16 31 H 0.14 -0.26 4.85 -2.91 -0.01 -0.28 16 32 H 0.14 -0.51 8.06 -2.91 -0.02 -0.53 16 33 H 0.13 -1.58 8.09 -2.39 -0.02 -1.60 16 34 H 0.13 -1.47 8.09 -2.39 -0.02 -1.49 16 35 H 0.42 -5.99 8.60 -92.70 -0.80 -6.79 16 36 H 0.06 0.07 8.14 -2.39 -0.02 0.05 16 37 H 0.08 -0.60 8.14 -2.39 -0.02 -0.62 16 38 H 0.07 -0.07 6.50 -2.39 -0.02 -0.08 16 39 H 0.07 0.03 8.14 -2.39 -0.02 0.01 16 40 H 0.09 -0.73 8.14 -2.38 -0.02 -0.75 16 41 H 0.07 -0.33 8.14 -2.38 -0.02 -0.35 16 42 H 0.10 -1.30 8.14 -2.39 -0.02 -1.32 16 43 H 0.09 -1.04 8.14 -2.39 -0.02 -1.06 16 44 H 0.13 -0.14 8.06 -2.91 -0.02 -0.16 16 45 H 0.12 0.43 8.06 -2.91 -0.02 0.40 16 Total: 0.00 -20.41 380.48 1.16 -19.26 By element: Atomic # 1 Polarization: -17.47 SS G_CDS: -0.37 Total: -17.84 kcal Atomic # 6 Polarization: 1.12 SS G_CDS: 2.97 Total: 4.09 kcal Atomic # 7 Polarization: 5.26 SS G_CDS: -2.25 Total: 3.01 kcal Atomic # 8 Polarization: -8.38 SS G_CDS: -3.48 Total: -11.86 kcal Atomic # 9 Polarization: -1.18 SS G_CDS: 2.23 Total: 1.05 kcal Atomic # 14 Polarization: 0.24 SS G_CDS: 2.05 Total: 2.29 kcal Total: -20.41 1.16 -19.26 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17849236_12335836.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -238.250 kcal (2) G-P(sol) polarization free energy of solvation -20.414 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -258.664 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.155 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.259 kcal (6) G-S(sol) free energy of system = (1) + (5) -257.509 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.24 seconds