Wall clock time and date at job start Sun Mar 7 2021 15:00:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86303 * 109.47131 * 2 1 4 4 C 1.50704 * 109.47501 * 119.99839 * 2 1 3 5 5 C 1.34447 * 126.48608 * 255.03008 * 4 2 1 6 6 N 1.36563 * 109.98860 * 179.97438 * 5 4 2 7 7 C 1.37824 * 109.85745 * 359.97438 * 6 5 4 8 8 C 1.38645 * 133.37999 * 180.02562 * 7 6 5 9 9 C 1.39315 * 119.66998 * 179.97438 * 8 7 6 10 10 C 1.47579 * 119.83437 * 179.97438 * 9 8 7 11 11 O 1.21593 * 119.99882 * 0.02562 * 10 9 8 12 12 N 1.34777 * 119.99797 * 180.27497 * 10 9 8 13 13 C 1.46505 * 119.99724 * 179.72717 * 12 10 9 14 14 H 1.09008 * 109.47120 * 325.00024 * 13 12 10 15 15 C 1.52996 * 109.47130 * 85.00158 * 13 12 10 16 16 C 1.52998 * 109.47178 * 179.97438 * 15 13 12 17 17 C 1.52998 * 109.47164 * 300.00289 * 16 15 13 18 18 H 1.08994 * 109.47018 * 299.99769 * 17 16 15 19 19 O 1.42909 * 109.47160 * 179.97438 * 17 16 15 20 20 C 1.42899 * 113.99461 * 89.99946 * 19 17 16 21 21 F 1.39896 * 109.47498 * 59.99980 * 20 19 17 22 22 F 1.39899 * 109.46969 * 180.02562 * 20 19 17 23 23 F 1.39905 * 109.47497 * 299.99701 * 20 19 17 24 24 C 1.52996 * 109.47309 * 59.99792 * 17 16 15 25 25 C 1.52998 * 109.47085 * 205.00369 * 13 12 10 26 26 C 1.40199 * 120.33488 * 0.25625 * 9 8 7 27 27 C 1.36231 * 120.37888 * 359.47888 * 26 9 8 28 28 C 1.39879 * 119.95752 * 0.52073 * 27 26 9 29 29 H 0.96694 * 114.00051 * 299.99650 * 1 2 3 30 30 H 1.09004 * 109.47456 * 239.99999 * 2 1 3 31 31 H 1.48500 * 109.99855 * 300.00056 * 3 2 1 32 32 H 1.48493 * 110.00105 * 61.31776 * 3 2 1 33 33 H 1.08009 * 125.00272 * 359.97438 * 5 4 2 34 34 H 0.96998 * 125.06798 * 179.97438 * 6 5 4 35 35 H 1.08001 * 120.16655 * 359.97438 * 8 7 6 36 36 H 0.96990 * 120.00491 * 359.73145 * 12 10 9 37 37 H 1.08998 * 109.47099 * 300.00036 * 15 13 12 38 38 H 1.08994 * 109.47099 * 60.00047 * 15 13 12 39 39 H 1.08997 * 109.47562 * 179.97438 * 16 15 13 40 40 H 1.09008 * 109.46993 * 59.99914 * 16 15 13 41 41 H 1.09002 * 109.47550 * 179.97438 * 24 17 16 42 42 H 1.09008 * 109.47229 * 60.00142 * 24 17 16 43 43 H 1.09002 * 109.47179 * 300.00135 * 25 13 12 44 44 H 1.09006 * 109.47312 * 59.99638 * 25 13 12 45 45 H 1.08002 * 119.81503 * 179.71822 * 26 9 8 46 46 H 1.07999 * 120.02636 * 180.23393 * 27 26 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 2.4612 -0.1363 2.3247 6 7 2.8028 -1.0946 3.2357 7 6 2.4937 -2.3430 2.7401 8 6 2.6294 -3.6277 3.2434 9 6 2.2110 -4.7153 2.4799 10 6 2.3543 -6.0844 3.0118 11 8 2.8360 -6.2610 4.1142 12 7 1.9557 -7.1393 2.2737 13 6 2.1034 -8.4988 2.7993 14 1 3.0136 -8.5607 3.3960 15 6 0.8958 -8.8413 3.6741 16 6 1.0498 -10.2613 4.2225 17 6 1.1339 -11.2511 3.0589 18 1 0.2238 -11.1887 2.4624 19 8 1.2782 -12.5774 3.5712 20 6 0.0385 -13.2504 3.7994 21 9 -0.6680 -13.3474 2.5958 22 9 0.2891 -14.5332 4.2982 23 9 -0.7196 -12.5293 4.7282 24 6 2.3415 -10.9086 2.1842 25 6 2.1879 -9.4889 1.6361 26 6 1.6600 -4.5161 1.2062 27 6 1.5182 -3.2568 0.7061 28 6 1.9336 -2.1547 1.4607 29 1 -0.3933 0.4416 0.7650 30 1 1.7924 -0.5138 -0.8900 31 1 1.5614 2.4679 -1.2085 32 1 1.5879 2.4586 1.2242 33 1 2.5967 0.9263 2.4629 34 1 3.2032 -0.9224 4.1022 35 1 3.0573 -3.7846 4.2226 36 1 1.5712 -6.9984 1.3945 37 1 0.8357 -8.1359 4.5028 38 1 -0.0142 -8.7794 3.0774 39 1 0.1897 -10.5052 4.8461 40 1 1.9600 -10.3237 4.8191 41 1 2.4017 -11.6140 1.3554 42 1 3.2517 -10.9710 2.7808 43 1 1.2778 -9.4270 1.0393 44 1 3.0482 -9.2449 1.0128 45 1 1.3427 -5.3656 0.6195 46 1 1.0895 -3.1097 -0.2742 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17849236_12335838.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 15:00:39 Heat of formation + Delta-G solvation = -218.756363 kcal Electronic energy + Delta-G solvation = -35027.098285 eV Core-core repulsion = 29660.959937 eV Total energy + Delta-G solvation = -5366.138348 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 385.133 amu Computer time = 1.36 seconds Orbital eigenvalues (eV) -51.26424 -49.01852 -48.94670 -42.45597 -41.27748 -40.17017 -38.20063 -37.82806 -37.43659 -34.92858 -33.25386 -31.98598 -31.17135 -30.70679 -29.50090 -26.55000 -26.34458 -24.91855 -23.97764 -23.60780 -23.17355 -21.54545 -21.22537 -20.78797 -20.42698 -19.97400 -19.74515 -19.36223 -18.40937 -17.87552 -17.26420 -16.96444 -16.85262 -16.33225 -16.14812 -15.96696 -15.88978 -15.74041 -15.65043 -15.47490 -15.37776 -15.37347 -15.14429 -15.12354 -15.06278 -14.85988 -14.75435 -14.61301 -14.50002 -14.24376 -13.91879 -13.88417 -13.34338 -13.08055 -13.01368 -12.77809 -12.60676 -12.48921 -12.25975 -12.19958 -12.09756 -11.76859 -11.60588 -11.24911 -11.06776 -10.77582 -10.44564 -10.16640 -9.35212 -8.78859 -4.83250 -0.30869 0.39422 0.80148 1.39511 1.40706 1.64569 1.88564 1.91017 2.02057 2.05590 2.26426 2.88616 2.93766 3.03619 3.46818 3.51139 3.56474 3.60729 3.71089 3.82185 3.85606 3.89552 3.92419 3.96945 4.07023 4.14527 4.23637 4.31669 4.36063 4.43599 4.50421 4.56812 4.60735 4.63696 4.75080 4.81581 4.95206 4.98875 5.02586 5.04886 5.07114 5.19134 5.24036 5.35505 5.42298 5.44260 5.53879 5.63067 5.99654 6.48593 6.52153 6.62568 7.15963 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.553 6.553 2 C -0.047 4.047 3 Si 0.772 3.228 4 C -0.224 4.224 5 C 0.089 3.911 6 N -0.578 5.578 7 C 0.067 3.933 8 C -0.069 4.069 9 C -0.136 4.136 10 C 0.563 3.437 11 O -0.581 6.581 12 N -0.707 5.707 13 C 0.142 3.858 14 H 0.073 0.927 15 C -0.120 4.120 16 C -0.141 4.141 17 C 0.079 3.921 18 H 0.097 0.903 19 O -0.375 6.375 20 C 0.596 3.404 21 F -0.174 7.174 22 F -0.149 7.149 23 F -0.176 7.176 24 C -0.107 4.107 25 C -0.114 4.114 26 C -0.106 4.106 27 C -0.084 4.084 28 C -0.080 4.080 29 H 0.383 0.617 30 H 0.115 0.885 31 H -0.308 1.308 32 H -0.270 1.270 33 H 0.206 0.794 34 H 0.434 0.566 35 H 0.127 0.873 36 H 0.416 0.584 37 H 0.055 0.945 38 H 0.084 0.916 39 H 0.075 0.925 40 H 0.072 0.928 41 H 0.095 0.905 42 H 0.076 0.924 43 H 0.096 0.904 44 H 0.096 0.904 45 H 0.155 0.845 46 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.827 4.381 -3.907 6.147 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.361 6.361 2 C -0.156 4.156 3 Si 0.676 3.324 4 C -0.232 4.232 5 C -0.041 4.041 6 N -0.181 5.181 7 C -0.040 4.040 8 C -0.090 4.090 9 C -0.140 4.140 10 C 0.351 3.649 11 O -0.462 6.462 12 N -0.358 5.358 13 C 0.037 3.963 14 H 0.091 0.909 15 C -0.159 4.159 16 C -0.180 4.180 17 C 0.024 3.976 18 H 0.115 0.885 19 O -0.299 6.299 20 C 0.504 3.496 21 F -0.156 7.156 22 F -0.131 7.131 23 F -0.159 7.159 24 C -0.145 4.145 25 C -0.152 4.152 26 C -0.126 4.126 27 C -0.102 4.102 28 C -0.085 4.085 29 H 0.232 0.768 30 H 0.132 0.868 31 H -0.237 1.237 32 H -0.196 1.196 33 H 0.223 0.777 34 H 0.274 0.726 35 H 0.145 0.855 36 H 0.255 0.745 37 H 0.074 0.926 38 H 0.103 0.897 39 H 0.093 0.907 40 H 0.091 0.909 41 H 0.113 0.887 42 H 0.095 0.905 43 H 0.114 0.886 44 H 0.114 0.886 45 H 0.172 0.828 46 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 2.249 4.687 -3.514 6.275 hybrid contribution -1.455 -0.226 1.010 1.786 sum 0.794 4.462 -2.504 5.178 Atomic orbital electron populations 1.86570 1.19167 1.80455 1.49919 1.24545 0.82694 1.11224 0.97164 0.94170 0.90016 0.71259 0.76948 1.20755 1.11902 0.91560 0.98952 1.22280 0.97782 0.95568 0.88426 1.41805 1.54161 1.03353 1.18772 1.18134 1.03866 0.86778 0.95226 1.20134 0.99930 0.88870 1.00079 1.19473 1.06086 0.91757 0.96671 1.18366 0.76821 0.85438 0.84228 1.90774 1.46637 1.86761 1.22041 1.45803 1.63500 1.05233 1.21299 1.21073 0.98553 0.80742 0.95903 0.90915 1.21802 0.99133 0.95096 0.99868 1.22106 1.03823 0.94282 0.97760 1.22856 1.02504 0.76868 0.95414 0.88500 1.88376 1.25043 1.31725 1.84723 1.19556 0.78526 0.76935 0.74599 1.93260 1.79767 1.95991 1.46604 1.93266 1.94270 1.38038 1.87521 1.93262 1.77407 1.78058 1.67139 1.21543 0.96322 0.97289 0.99371 1.21735 1.05415 0.91461 0.96545 1.20920 0.99525 0.98158 0.93975 1.20424 0.98938 0.90658 1.00189 1.19548 1.00970 0.94160 0.93824 0.76766 0.86758 1.23667 1.19582 0.77748 0.72629 0.85533 0.74539 0.92581 0.89732 0.90678 0.90937 0.88652 0.90481 0.88560 0.88565 0.82773 0.84233 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.89 12.88 -148.98 -1.92 -2.81 16 2 C -0.05 0.10 3.06 71.24 0.22 0.32 16 3 Si 0.77 -3.91 30.82 68.60 2.11 -1.80 16 4 C -0.22 0.28 5.57 -18.64 -0.10 0.17 16 5 C 0.09 -0.46 10.43 83.09 0.87 0.41 16 6 N -0.58 2.04 6.07 -187.71 -1.14 0.90 16 7 C 0.07 0.15 7.26 38.96 0.28 0.44 16 8 C -0.07 -0.31 9.61 22.63 0.22 -0.10 16 9 C -0.14 -0.46 5.87 -20.08 -0.12 -0.58 16 10 C 0.56 2.95 7.73 86.71 0.67 3.62 16 11 O -0.58 -7.85 15.98 -4.01 -0.06 -7.91 16 12 N -0.71 1.63 5.03 -445.64 -2.24 -0.61 16 13 C 0.14 -0.33 2.45 44.99 0.11 -0.22 16 14 H 0.07 0.20 7.58 -2.38 -0.02 0.18 16 15 C -0.12 0.16 5.49 30.59 0.17 0.33 16 16 C -0.14 0.11 5.39 30.59 0.16 0.28 16 17 C 0.08 -0.20 2.40 30.59 0.07 -0.13 16 18 H 0.10 -0.49 7.20 -2.39 -0.02 -0.50 16 19 O -0.37 -0.73 10.24 -148.98 -1.52 -2.25 16 20 C 0.60 1.53 3.71 113.37 0.42 1.95 16 21 F -0.17 -0.33 16.61 44.97 0.75 0.42 16 22 F -0.15 -0.71 17.53 44.97 0.79 0.08 16 23 F -0.18 -0.54 15.44 44.97 0.69 0.16 16 24 C -0.11 0.61 5.57 30.58 0.17 0.78 16 25 C -0.11 0.93 5.39 30.58 0.16 1.09 16 26 C -0.11 0.12 9.46 22.28 0.21 0.33 16 27 C -0.08 -0.06 10.03 22.20 0.22 0.17 16 28 C -0.08 -0.20 6.35 -20.14 -0.13 -0.32 16 29 H 0.38 -1.55 8.70 -74.06 -0.64 -2.19 16 30 H 0.11 -0.29 7.96 -2.38 -0.02 -0.31 16 31 H -0.31 -1.19 7.11 99.48 0.71 -0.48 16 32 H -0.27 0.93 6.99 99.48 0.70 1.63 16 33 H 0.21 -2.42 6.27 -2.91 -0.02 -2.44 16 34 H 0.43 -3.82 8.96 -92.71 -0.83 -4.65 16 35 H 0.13 0.68 7.62 -2.91 -0.02 0.66 16 36 H 0.42 -3.56 6.59 -92.72 -0.61 -4.17 16 37 H 0.06 0.22 8.14 -2.39 -0.02 0.20 16 38 H 0.08 -0.36 8.14 -2.39 -0.02 -0.38 16 39 H 0.07 0.03 6.50 -2.39 -0.02 0.01 16 40 H 0.07 0.09 8.14 -2.38 -0.02 0.07 16 41 H 0.09 -0.69 8.14 -2.39 -0.02 -0.71 16 42 H 0.08 -0.30 8.14 -2.38 -0.02 -0.32 16 43 H 0.10 -1.12 8.14 -2.39 -0.02 -1.14 16 44 H 0.10 -0.92 8.14 -2.38 -0.02 -0.94 16 45 H 0.15 -1.27 6.36 -2.91 -0.02 -1.29 16 46 H 0.14 -0.25 8.06 -2.91 -0.02 -0.28 16 Total: 0.00 -22.45 389.27 0.10 -22.36 By element: Atomic # 1 Polarization: -16.09 SS G_CDS: -0.97 Total: -17.06 kcal Atomic # 6 Polarization: 4.92 SS G_CDS: 3.61 Total: 8.53 kcal Atomic # 7 Polarization: 3.67 SS G_CDS: -3.38 Total: 0.29 kcal Atomic # 8 Polarization: -9.47 SS G_CDS: -3.51 Total: -12.98 kcal Atomic # 9 Polarization: -1.57 SS G_CDS: 2.23 Total: 0.66 kcal Atomic # 14 Polarization: -3.91 SS G_CDS: 2.11 Total: -1.80 kcal Total: -22.45 0.10 -22.36 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17849236_12335838.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -196.401 kcal (2) G-P(sol) polarization free energy of solvation -22.453 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -218.853 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.097 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.356 kcal (6) G-S(sol) free energy of system = (1) + (5) -218.756 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.37 seconds