Wall clock time and date at job start Sun Mar 7 2021 15:01:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35662 * 116.99759 * 2 1 4 4 C 1.40137 * 120.14814 * 179.97438 * 3 2 1 5 5 C 1.47534 * 120.19014 * 0.02562 * 4 3 2 6 6 O 1.21588 * 120.00383 * 359.97438 * 5 4 3 7 7 N 1.34782 * 119.99870 * 179.97438 * 5 4 3 8 8 C 1.46499 * 120.00074 * 179.97438 * 7 5 4 9 9 H 1.09001 * 109.46813 * 35.00305 * 8 7 5 10 10 C 1.53000 * 109.46840 * 155.00031 * 8 7 5 11 11 C 1.52997 * 109.47060 * 180.02562 * 10 8 7 12 12 C 1.53006 * 109.47127 * 300.00449 * 11 10 8 13 13 H 1.09001 * 109.47002 * 299.99574 * 12 11 10 14 14 O 1.42900 * 109.46976 * 179.97438 * 12 11 10 15 15 C 1.42902 * 113.99821 * 89.99801 * 14 12 11 16 16 F 1.39900 * 109.47156 * 59.99936 * 15 14 12 17 17 F 1.39898 * 109.47267 * 179.97438 * 15 14 12 18 18 F 1.39900 * 109.47303 * 299.99840 * 15 14 12 19 19 C 1.52997 * 109.47164 * 59.99836 * 12 11 10 20 20 C 1.52996 * 109.47185 * 275.00149 * 8 7 5 21 21 C 1.39701 * 119.61514 * 180.27883 * 4 3 2 22 22 C 1.37785 * 119.90848 * 359.47090 * 21 4 3 23 23 C 1.50706 * 119.85153 * 180.25455 * 22 21 4 24 24 O 1.42895 * 109.47302 * 300.28061 * 23 22 21 25 25 Si 1.86301 * 109.47035 * 180.27943 * 23 22 21 26 26 C 1.38551 * 120.30172 * 0.53366 * 22 21 4 27 27 C 1.38051 * 120.38711 * 359.74393 * 26 22 21 28 28 H 1.09004 * 109.47395 * 59.99373 * 1 2 3 29 29 H 1.08996 * 109.47315 * 179.97438 * 1 2 3 30 30 H 1.09000 * 109.46789 * 299.99739 * 1 2 3 31 31 H 0.97002 * 119.99499 * 0.02562 * 7 5 4 32 32 H 1.09002 * 109.47398 * 300.00326 * 10 8 7 33 33 H 1.09001 * 109.47194 * 60.00507 * 10 8 7 34 34 H 1.08998 * 109.47533 * 59.99948 * 11 10 8 35 35 H 1.08996 * 109.47853 * 180.02562 * 11 10 8 36 36 H 1.09002 * 109.47045 * 180.02562 * 19 12 11 37 37 H 1.09001 * 109.47375 * 59.99966 * 19 12 11 38 38 H 1.08992 * 109.47554 * 299.99819 * 20 8 7 39 39 H 1.09004 * 109.47108 * 60.00069 * 20 8 7 40 40 H 1.08006 * 120.04900 * 179.72877 * 21 4 3 41 41 H 1.09000 * 109.46925 * 60.27932 * 23 22 21 42 42 H 0.96706 * 113.99895 * 300.00608 * 24 23 22 43 43 H 1.48509 * 109.99953 * 180.02562 * 25 23 22 44 44 H 1.48500 * 110.00207 * 301.31507 * 25 23 22 45 45 H 1.07999 * 119.80827 * 179.71713 * 26 22 21 46 46 H 1.07995 * 119.95878 * 179.97438 * 27 26 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0448 1.2088 0.0000 4 6 3.4441 1.2858 0.0005 5 6 4.2550 0.0533 0.0005 6 8 3.7095 -1.0334 0.0005 7 7 5.6005 0.1318 0.0005 8 6 6.4057 -1.0920 0.0011 9 1 5.9022 -1.8584 -0.5881 10 6 7.7782 -0.7997 -0.6086 11 6 8.6190 -2.0779 -0.6086 12 6 8.7942 -2.5732 0.8284 13 1 9.2979 -1.8070 1.4179 14 8 9.5790 -3.7674 0.8283 15 6 10.9850 -3.5389 0.9418 16 9 11.2533 -2.8687 2.1402 17 9 11.6590 -4.7648 0.9327 18 9 11.4193 -2.7594 -0.1357 19 6 7.4217 -2.8654 1.4381 20 6 6.5809 -1.5865 1.4383 21 6 4.0667 2.5364 0.0064 22 6 3.3037 3.6837 0.0007 23 6 3.9767 5.0322 0.0012 24 8 4.7917 5.1573 1.1682 25 14 2.6824 6.3721 0.0011 26 6 1.9205 3.6034 0.0001 27 6 1.2924 2.3741 0.0001 28 1 -0.3634 0.5139 -0.8899 29 1 -0.3634 -1.0276 -0.0005 30 1 -0.3633 0.5138 0.8900 31 1 6.0356 0.9988 0.0009 32 1 7.6534 -0.4473 -1.6325 33 1 8.2817 -0.0332 -0.0194 34 1 8.1153 -2.8441 -1.1980 35 1 9.5969 -1.8697 -1.0426 36 1 7.5465 -3.2178 2.4620 37 1 6.9180 -3.6316 0.8486 38 1 7.0844 -0.8202 2.0275 39 1 5.6031 -1.7948 1.8727 40 1 5.1446 2.6039 0.0113 41 1 4.5990 5.1280 -0.8885 42 1 4.3030 5.0818 1.9993 43 1 3.3332 7.7070 0.0011 44 1 1.8082 6.2339 -1.1913 45 1 1.3302 4.5078 0.0002 46 1 0.2138 2.3195 0.0001 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17849236_12496546.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 15:01:20 Heat of formation + Delta-G solvation = -283.417911 kcal Electronic energy + Delta-G solvation = -35142.426057 eV Core-core repulsion = 29776.679773 eV Total energy + Delta-G solvation = -5365.746283 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 376.138 amu Computer time = 1.33 seconds Orbital eigenvalues (eV) -51.25889 -49.01434 -48.93820 -41.83295 -40.83910 -39.83192 -39.17342 -37.88584 -37.08377 -34.93057 -32.73952 -31.99915 -31.81034 -29.91143 -28.47926 -26.45073 -26.13570 -25.24559 -23.98553 -23.53865 -22.38768 -21.56899 -21.18840 -20.42092 -19.97238 -19.74944 -19.46010 -18.36050 -18.10499 -17.54917 -16.91746 -16.86514 -16.64571 -16.20708 -16.10149 -15.91985 -15.84408 -15.81563 -15.73482 -15.50820 -15.40715 -15.36961 -15.13238 -15.08443 -14.78583 -14.65153 -14.52493 -14.46376 -14.28779 -14.00444 -13.61486 -13.42481 -13.35137 -13.11018 -12.85097 -12.75514 -12.42844 -12.28553 -12.24750 -12.08859 -12.03943 -11.77496 -11.54750 -11.24862 -10.98529 -10.38055 -10.27708 -10.03348 -9.27309 -4.97030 -0.25467 0.22697 0.80071 1.35004 1.65298 1.78934 1.96521 2.00971 2.11230 2.27746 2.69582 2.93748 3.04172 3.43471 3.49889 3.50879 3.58204 3.68050 3.76485 3.83248 3.85435 3.96179 3.99839 4.04925 4.16842 4.21786 4.30795 4.35013 4.36183 4.39884 4.46677 4.57685 4.61147 4.68201 4.72178 4.75797 4.92565 4.93902 5.00589 5.03295 5.06506 5.12456 5.17953 5.28782 5.34530 5.46533 5.57575 6.30641 6.52551 6.82156 7.22661 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.011 3.989 2 O -0.313 6.313 3 C 0.170 3.830 4 C -0.196 4.196 5 C 0.558 3.442 6 O -0.562 6.562 7 N -0.713 5.713 8 C 0.144 3.856 9 H 0.070 0.930 10 C -0.114 4.114 11 C -0.141 4.141 12 C 0.080 3.920 13 H 0.097 0.903 14 O -0.376 6.376 15 C 0.596 3.404 16 F -0.175 7.175 17 F -0.150 7.150 18 F -0.173 7.173 19 C -0.107 4.107 20 C -0.118 4.118 21 C -0.016 4.016 22 C -0.167 4.167 23 C -0.062 4.062 24 O -0.553 6.553 25 Si 0.769 3.231 26 C -0.044 4.044 27 C -0.213 4.213 28 H 0.071 0.929 29 H 0.106 0.894 30 H 0.075 0.925 31 H 0.412 0.588 32 H 0.087 0.913 33 H 0.093 0.907 34 H 0.075 0.925 35 H 0.086 0.914 36 H 0.083 0.917 37 H 0.072 0.928 38 H 0.086 0.914 39 H 0.061 0.939 40 H 0.152 0.848 41 H 0.113 0.887 42 H 0.396 0.604 43 H -0.303 1.303 44 H -0.284 1.284 45 H 0.156 0.844 46 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.374 6.237 1.797 7.315 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.083 4.083 2 O -0.224 6.224 3 C 0.122 3.878 4 C -0.200 4.200 5 C 0.347 3.653 6 O -0.441 6.441 7 N -0.366 5.366 8 C 0.039 3.961 9 H 0.088 0.912 10 C -0.152 4.152 11 C -0.179 4.179 12 C 0.025 3.975 13 H 0.115 0.885 14 O -0.300 6.300 15 C 0.505 3.495 16 F -0.158 7.158 17 F -0.131 7.131 18 F -0.155 7.155 19 C -0.145 4.145 20 C -0.157 4.157 21 C -0.034 4.034 22 C -0.168 4.168 23 C -0.173 4.173 24 O -0.361 6.361 25 Si 0.676 3.324 26 C -0.061 4.061 27 C -0.231 4.231 28 H 0.089 0.911 29 H 0.125 0.875 30 H 0.094 0.906 31 H 0.250 0.750 32 H 0.105 0.895 33 H 0.112 0.888 34 H 0.094 0.906 35 H 0.105 0.895 36 H 0.102 0.898 37 H 0.091 0.909 38 H 0.105 0.895 39 H 0.079 0.921 40 H 0.169 0.831 41 H 0.130 0.870 42 H 0.246 0.754 43 H -0.231 1.231 44 H -0.211 1.211 45 H 0.173 0.827 46 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges -3.597 5.826 0.922 6.909 hybrid contribution 0.568 -0.106 -0.441 0.727 sum -3.028 5.720 0.481 6.490 Atomic orbital electron populations 1.23438 0.76595 1.05421 1.02824 1.86337 1.23129 1.26404 1.86571 1.19430 0.91412 0.85517 0.91483 1.19419 0.91099 0.94063 1.15439 1.18279 0.82663 0.88587 0.75817 1.90817 1.72469 1.30239 1.50568 1.45832 1.05060 1.10370 1.75320 1.21018 0.91605 0.86832 0.96603 0.91214 1.21703 0.92792 0.97716 1.02989 1.22121 1.02161 0.98342 0.95305 1.22819 0.91934 0.84177 0.98605 0.88471 1.88377 1.12909 1.35878 1.92878 1.19533 0.81795 0.73915 0.74298 1.93261 1.94046 1.81014 1.47435 1.93266 1.79279 1.44255 1.96318 1.93259 1.90359 1.75457 1.56446 1.21522 0.91979 0.98699 1.02299 1.21821 0.99983 0.96991 0.96891 1.21101 1.00782 0.89105 0.92447 1.20249 0.93785 0.96037 1.06745 1.25011 1.01929 0.98908 0.91411 1.86470 1.38073 1.95313 1.16275 0.93846 0.77963 0.74098 0.86525 1.21277 0.93775 0.97848 0.93227 1.21466 1.01749 0.90956 1.08937 0.91089 0.87526 0.90645 0.75012 0.89456 0.88829 0.90581 0.89542 0.89802 0.90932 0.89511 0.92058 0.83059 0.86970 0.75422 1.23119 1.21147 0.82688 0.82128 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.02 9.81 113.37 1.11 1.09 16 2 O -0.31 -2.39 8.57 -68.86 -0.59 -2.98 16 3 C 0.17 0.73 6.70 22.84 0.15 0.88 16 4 C -0.20 -0.73 5.89 -20.01 -0.12 -0.85 16 5 C 0.56 3.93 7.73 86.69 0.67 4.60 16 6 O -0.56 -8.86 14.82 16.93 0.25 -8.61 16 7 N -0.71 0.37 5.03 -445.70 -2.24 -1.87 16 8 C 0.14 -0.11 2.45 44.99 0.11 0.00 16 9 H 0.07 0.33 7.58 -2.39 -0.02 0.31 16 10 C -0.11 0.64 5.39 30.59 0.16 0.80 16 11 C -0.14 0.45 5.39 30.60 0.17 0.62 16 12 C 0.08 -0.13 2.40 30.60 0.07 -0.06 16 13 H 0.10 -0.41 7.20 -2.39 -0.02 -0.43 16 14 O -0.38 -0.97 10.24 -148.98 -1.52 -2.50 16 15 C 0.60 1.49 3.71 113.37 0.42 1.91 16 16 F -0.18 -0.40 16.61 44.97 0.75 0.34 16 17 F -0.15 -0.72 17.53 44.97 0.79 0.06 16 18 F -0.17 -0.30 15.44 44.97 0.69 0.40 16 19 C -0.11 0.12 5.57 30.61 0.17 0.29 16 20 C -0.12 0.13 5.50 30.61 0.17 0.30 16 21 C -0.02 0.03 9.08 22.52 0.20 0.24 16 22 C -0.17 0.67 5.39 -19.89 -0.11 0.56 16 23 C -0.06 0.33 2.82 71.24 0.20 0.53 16 24 O -0.55 2.70 12.76 -148.98 -1.90 0.80 16 25 Si 0.77 -4.47 29.77 68.60 2.04 -2.43 16 26 C -0.04 0.21 8.66 22.30 0.19 0.41 16 27 C -0.21 0.48 9.03 22.34 0.20 0.68 16 28 H 0.07 -0.36 7.66 -2.39 -0.02 -0.38 16 29 H 0.11 -0.32 8.14 -2.39 -0.02 -0.34 16 30 H 0.08 -0.43 7.66 -2.39 -0.02 -0.45 16 31 H 0.41 -2.63 6.63 -92.71 -0.61 -3.25 16 32 H 0.09 -0.54 8.14 -2.39 -0.02 -0.56 16 33 H 0.09 -0.84 8.14 -2.39 -0.02 -0.86 16 34 H 0.08 -0.11 8.14 -2.39 -0.02 -0.13 16 35 H 0.09 -0.30 6.50 -2.39 -0.02 -0.31 16 36 H 0.08 -0.13 8.14 -2.39 -0.02 -0.15 16 37 H 0.07 0.08 8.14 -2.39 -0.02 0.06 16 38 H 0.09 -0.38 8.14 -2.39 -0.02 -0.40 16 39 H 0.06 0.23 8.14 -2.38 -0.02 0.21 16 40 H 0.15 -0.98 6.40 -2.91 -0.02 -1.00 16 41 H 0.11 -0.52 7.96 -2.39 -0.02 -0.54 16 42 H 0.40 -4.86 8.70 -74.05 -0.64 -5.50 16 43 H -0.30 -0.79 7.11 99.48 0.71 -0.09 16 44 H -0.28 0.35 7.11 99.48 0.71 1.05 16 45 H 0.16 -1.52 4.85 -2.91 -0.01 -1.54 16 46 H 0.16 -1.15 6.30 -2.91 -0.02 -1.17 16 Total: 0.00 -22.12 383.08 1.89 -20.23 By element: Atomic # 1 Polarization: -15.29 SS G_CDS: -0.16 Total: -15.45 kcal Atomic # 6 Polarization: 8.22 SS G_CDS: 3.78 Total: 12.00 kcal Atomic # 7 Polarization: 0.37 SS G_CDS: -2.24 Total: -1.87 kcal Atomic # 8 Polarization: -9.52 SS G_CDS: -3.76 Total: -13.29 kcal Atomic # 9 Polarization: -1.43 SS G_CDS: 2.23 Total: 0.80 kcal Atomic # 14 Polarization: -4.47 SS G_CDS: 2.04 Total: -2.43 kcal Total: -22.12 1.89 -20.23 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17849236_12496546.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -263.191 kcal (2) G-P(sol) polarization free energy of solvation -22.119 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -285.310 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.892 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.226 kcal (6) G-S(sol) free energy of system = (1) + (5) -283.418 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.34 seconds