Wall clock time and date at job start Sun Mar 7 2021 15:01:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 C 1.39287 * 121.02931 * 2 1 4 4 C 1.46495 * 134.19935 * 359.92104 * 3 2 1 5 5 C 1.50691 * 126.60251 * 0.36265 * 4 3 2 6 6 O 1.42904 * 109.47318 * 284.99641 * 5 4 3 7 7 Si 1.86308 * 109.47381 * 164.99609 * 5 4 3 8 8 C 1.34185 * 106.79809 * 180.33948 * 4 3 2 9 9 N 1.36944 * 109.95652 * 0.02562 * 8 4 3 10 10 C 1.37160 * 110.11123 * 359.97438 * 9 8 4 11 11 N 1.32820 * 132.96788 * 180.02562 * 10 9 8 12 12 C 1.31306 * 121.89511 * 179.97438 * 11 10 9 13 13 C 1.39746 * 121.02938 * 179.77596 * 2 1 3 14 14 C 1.47668 * 120.45645 * 359.97438 * 13 2 1 15 15 O 1.21571 * 119.99899 * 353.70959 * 14 13 2 16 16 N 1.34779 * 119.99760 * 173.70910 * 14 13 2 17 17 C 1.46498 * 119.99646 * 180.02562 * 16 14 13 18 18 H 1.09002 * 109.46857 * 324.98991 * 17 16 14 19 19 C 1.52994 * 109.47493 * 84.99453 * 17 16 14 20 20 C 1.52996 * 109.47169 * 179.97438 * 19 17 16 21 21 C 1.53006 * 109.47300 * 300.00171 * 20 19 17 22 22 H 1.09001 * 109.46850 * 300.00169 * 21 20 19 23 23 O 1.42904 * 109.47274 * 179.97438 * 21 20 19 24 24 C 1.42898 * 114.00009 * 89.99894 * 23 21 20 25 25 F 1.39900 * 109.47128 * 59.99845 * 24 23 21 26 26 F 1.39898 * 109.47010 * 179.97438 * 24 23 21 27 27 F 1.39898 * 109.47273 * 300.00267 * 24 23 21 28 28 C 1.53003 * 109.47078 * 59.99667 * 21 20 19 29 29 C 1.52996 * 109.47327 * 300.00317 * 28 21 20 30 30 H 1.09007 * 109.46822 * 263.92867 * 1 2 3 31 31 H 1.08997 * 109.46958 * 23.92864 * 1 2 3 32 32 H 1.08997 * 109.46943 * 143.92928 * 1 2 3 33 33 H 1.09000 * 109.47023 * 44.99830 * 5 4 3 34 34 H 0.96697 * 113.99975 * 300.00249 * 6 5 4 35 35 H 1.48499 * 109.99506 * 58.68028 * 7 5 4 36 36 H 1.48500 * 109.99940 * 179.97438 * 7 5 4 37 37 H 1.07998 * 125.01910 * 179.97438 * 8 4 3 38 38 H 0.96994 * 124.94687 * 180.02562 * 9 8 4 39 39 H 1.07992 * 119.31560 * 179.97438 * 12 11 10 40 40 H 0.96996 * 120.00335 * 359.97438 * 16 14 13 41 41 H 1.08998 * 109.47588 * 300.00152 * 19 17 16 42 42 H 1.09005 * 109.46771 * 60.00167 * 19 17 16 43 43 H 1.09001 * 109.47307 * 60.00061 * 20 19 17 44 44 H 1.09001 * 109.47187 * 180.02562 * 20 19 17 45 45 H 1.08997 * 109.47035 * 179.97438 * 28 21 20 46 46 H 1.09005 * 109.46684 * 60.00050 * 28 21 20 47 47 H 1.09001 * 109.47187 * 179.97438 * 29 28 21 48 48 H 1.09002 * 109.46901 * 300.00281 * 29 28 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.2251 1.1936 0.0000 4 6 1.8516 2.6101 -0.0014 5 6 0.4527 3.1705 0.0042 6 8 -0.1256 3.0210 -1.2941 7 14 0.5093 4.9774 0.4544 8 6 2.9948 3.3126 -0.0082 9 7 4.0669 2.4606 -0.0118 10 6 3.6348 1.1588 -0.0067 11 7 4.2720 -0.0066 -0.0070 12 6 3.6267 -1.1501 -0.0008 13 6 2.2274 -1.1975 0.0047 14 6 1.5225 -2.4950 0.0103 15 8 0.3128 -2.5291 0.1263 16 7 2.2203 -3.6415 -0.1131 17 6 1.5208 -4.9287 -0.1081 18 1 0.6690 -4.8767 0.5700 19 6 1.0290 -5.2476 -1.5213 20 6 0.2992 -6.5922 -1.5161 21 6 1.2567 -7.6905 -1.0494 22 1 2.1086 -7.7421 -1.7275 23 8 0.5748 -8.9464 -1.0439 24 6 0.6648 -9.6620 -2.2775 25 9 2.0081 -9.9229 -2.5684 26 9 -0.0313 -10.8705 -2.1674 27 9 0.1062 -8.8933 -3.3044 28 6 1.7486 -7.3716 0.3639 29 6 2.4784 -6.0270 0.3587 30 1 -0.3633 -0.1087 1.0220 31 1 -0.3633 0.9393 -0.4168 32 1 -0.3633 -0.8306 -0.6051 33 1 -0.1512 2.6327 0.7351 34 1 0.3608 3.4748 -1.9959 35 1 1.3558 5.7164 -0.5164 36 1 -0.8641 5.5420 0.4628 37 1 3.0598 4.3906 -0.0113 38 1 4.9965 2.7373 -0.0164 39 1 4.1870 -2.0734 -0.0017 40 1 3.1854 -3.6143 -0.2060 41 1 0.3472 -4.4649 -1.8540 42 1 1.8810 -5.2996 -2.1993 43 1 -0.5527 -6.5406 -0.8380 44 1 -0.0508 -6.8195 -2.5230 45 1 2.4303 -8.1543 0.6966 46 1 0.8967 -7.3200 1.0420 47 1 2.8284 -5.7997 1.3657 48 1 3.3302 -6.0786 -0.3195 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17849236_12890568.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 15:01:43 Heat of formation + Delta-G solvation = -204.828049 kcal Electronic energy + Delta-G solvation = -38079.297099 eV Core-core repulsion = 32492.799198 eV Total energy + Delta-G solvation = -5586.497901 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 400.144 amu Computer time = 1.54 seconds Orbital eigenvalues (eV) -51.15981 -48.89533 -48.85276 -42.87112 -41.30637 -40.23844 -38.83932 -38.03804 -37.73918 -35.25078 -34.68651 -32.10896 -32.00651 -31.47203 -29.72349 -28.68643 -26.60046 -26.23967 -24.81308 -24.10442 -24.08022 -23.22423 -21.69305 -21.43299 -20.70432 -20.38569 -19.87999 -19.67636 -19.30240 -18.79338 -17.87353 -17.62198 -17.23657 -16.88687 -16.65023 -16.38032 -16.22307 -15.95503 -15.73609 -15.67153 -15.61538 -15.49032 -15.38127 -15.26347 -15.08522 -15.04813 -14.99635 -14.74444 -14.66041 -14.39523 -14.06658 -13.94925 -13.88566 -13.70183 -13.52982 -13.46123 -13.23288 -13.13412 -12.99998 -12.69821 -12.44149 -12.37787 -12.18991 -11.87172 -11.71307 -11.29298 -11.11672 -11.07095 -10.55277 -10.23256 -10.13408 -9.61228 -9.17182 -5.02562 -0.24896 -0.07603 0.85325 1.21229 1.35257 1.48389 1.58311 1.89445 1.92292 1.97942 2.11928 2.83436 3.00974 3.10401 3.24455 3.35584 3.38587 3.42810 3.47980 3.56388 3.68547 3.70618 3.74464 3.79767 3.90067 3.92523 4.07056 4.13896 4.21301 4.22513 4.25762 4.37408 4.50533 4.52882 4.64894 4.65620 4.75164 4.78631 4.89440 4.93573 4.95905 5.02143 5.04261 5.09961 5.17956 5.27980 5.37169 5.43634 5.56430 5.76225 6.07096 6.41679 6.43553 6.83296 7.21991 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.133 4.133 2 C 0.086 3.914 3 C -0.149 4.149 4 C -0.176 4.176 5 C -0.044 4.044 6 O -0.527 6.527 7 Si 0.686 3.314 8 C 0.067 3.933 9 N -0.569 5.569 10 C 0.308 3.692 11 N -0.504 5.504 12 C 0.181 3.819 13 C -0.235 4.235 14 C 0.573 3.427 15 O -0.527 6.527 16 N -0.726 5.726 17 C 0.143 3.857 18 H 0.096 0.904 19 C -0.127 4.127 20 C -0.145 4.145 21 C 0.083 3.917 22 H 0.084 0.916 23 O -0.367 6.367 24 C 0.594 3.406 25 F -0.176 7.176 26 F -0.142 7.142 27 F -0.174 7.174 28 C -0.110 4.110 29 C -0.124 4.124 30 H 0.082 0.918 31 H 0.083 0.917 32 H 0.097 0.903 33 H 0.119 0.881 34 H 0.375 0.625 35 H -0.258 1.258 36 H -0.254 1.254 37 H 0.183 0.817 38 H 0.425 0.575 39 H 0.162 0.838 40 H 0.399 0.601 41 H 0.080 0.920 42 H 0.068 0.932 43 H 0.083 0.917 44 H 0.080 0.920 45 H 0.084 0.916 46 H 0.084 0.916 47 H 0.085 0.915 48 H 0.075 0.925 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.062 3.824 2.131 6.693 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.189 4.189 2 C 0.078 3.922 3 C -0.156 4.156 4 C -0.184 4.184 5 C -0.154 4.154 6 O -0.333 6.333 7 Si 0.586 3.414 8 C -0.059 4.059 9 N -0.175 5.175 10 C 0.075 3.925 11 N -0.217 5.217 12 C 0.012 3.988 13 C -0.242 4.242 14 C 0.361 3.639 15 O -0.404 6.404 16 N -0.378 5.378 17 C 0.039 3.961 18 H 0.114 0.886 19 C -0.165 4.165 20 C -0.183 4.183 21 C 0.027 3.973 22 H 0.102 0.898 23 O -0.290 6.290 24 C 0.502 3.498 25 F -0.158 7.158 26 F -0.123 7.123 27 F -0.156 7.156 28 C -0.148 4.148 29 C -0.162 4.162 30 H 0.101 0.899 31 H 0.101 0.899 32 H 0.116 0.884 33 H 0.137 0.863 34 H 0.222 0.778 35 H -0.183 1.183 36 H -0.178 1.178 37 H 0.200 0.800 38 H 0.264 0.736 39 H 0.179 0.821 40 H 0.234 0.766 41 H 0.099 0.901 42 H 0.087 0.913 43 H 0.102 0.898 44 H 0.099 0.901 45 H 0.102 0.898 46 H 0.103 0.897 47 H 0.103 0.897 48 H 0.093 0.907 Dipole moment (debyes) X Y Z Total from point charges 4.504 4.361 2.418 6.719 hybrid contribution 0.480 -0.288 -1.612 1.706 sum 4.984 4.073 0.806 6.487 Atomic orbital electron populations 1.21271 0.88770 1.04967 1.03893 1.19928 0.97177 0.89142 0.85972 1.19468 0.92756 0.93512 1.09828 1.20616 0.95211 0.91046 1.11518 1.24408 0.90871 1.11831 0.88324 1.86619 1.54309 1.75910 1.16466 0.95126 0.82735 0.73563 0.89963 1.21802 0.85121 0.95969 1.03042 1.41516 1.09600 1.02721 1.63663 1.18501 0.89361 0.85878 0.98809 1.66431 1.40585 0.96018 1.18672 1.22503 0.90090 0.94430 0.91803 1.20433 0.94741 0.93758 1.15247 1.17870 0.86840 0.83243 0.75926 1.90767 1.13515 1.86950 1.49143 1.45928 1.10756 1.05531 1.75566 1.21061 0.95932 0.81644 0.97479 0.88567 1.21888 1.00923 0.96748 0.96968 1.22168 0.99051 0.93635 1.03441 1.22670 0.94610 0.79838 1.00164 0.89844 1.88364 1.75472 1.35013 1.30193 1.19572 0.74228 0.77329 0.78661 1.93261 1.34930 1.94078 1.93538 1.93286 1.79298 1.43923 1.95805 1.93265 1.85561 1.75571 1.61248 1.21534 1.01608 0.97326 0.94309 1.21791 0.98252 0.92956 1.03209 0.89916 0.89857 0.88438 0.86328 0.77771 1.18280 1.17811 0.79973 0.73592 0.82113 0.76586 0.90146 0.91285 0.89824 0.90119 0.89777 0.89729 0.89653 0.90659 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -0.33 8.45 36.01 0.30 -0.03 16 2 C 0.09 0.22 5.98 -103.67 -0.62 -0.40 16 3 C -0.15 -0.29 6.16 -105.13 -0.65 -0.94 16 4 C -0.18 0.05 5.57 -102.73 -0.57 -0.52 16 5 C -0.04 0.04 1.88 36.00 0.07 0.11 16 6 O -0.53 -0.26 11.64 -35.23 -0.41 -0.67 16 7 Si 0.69 -1.65 30.83 -169.99 -5.24 -6.89 16 8 C 0.07 -0.15 10.44 -16.70 -0.17 -0.32 16 9 N -0.57 0.74 6.04 -12.12 -0.07 0.67 16 10 C 0.31 0.53 8.42 -155.71 -1.31 -0.78 16 11 N -0.50 -1.00 10.37 -11.96 -0.12 -1.13 16 12 C 0.18 0.05 10.67 -17.11 -0.18 -0.13 16 13 C -0.23 -0.36 5.89 -104.82 -0.62 -0.97 16 14 C 0.57 0.86 7.68 -12.41 -0.10 0.77 16 15 O -0.53 -2.34 13.16 5.30 0.07 -2.27 16 16 N -0.73 1.23 5.03 -54.81 -0.28 0.95 16 17 C 0.14 -0.26 2.45 -67.93 -0.17 -0.42 16 18 H 0.10 0.00 7.58 -51.93 -0.39 -0.40 16 19 C -0.13 0.17 5.49 -26.74 -0.15 0.02 16 20 C -0.14 0.15 5.39 -26.73 -0.14 0.01 16 21 C 0.08 -0.11 2.40 -26.73 -0.06 -0.17 16 22 H 0.08 -0.17 7.20 -51.93 -0.37 -0.54 16 23 O -0.37 -0.30 10.24 -35.23 -0.36 -0.66 16 24 C 0.59 0.69 3.71 101.05 0.37 1.06 16 25 F -0.18 -0.19 16.61 2.25 0.04 -0.16 16 26 F -0.14 -0.30 17.53 2.25 0.04 -0.26 16 27 F -0.17 -0.22 15.44 2.25 0.03 -0.19 16 28 C -0.11 0.29 5.57 -26.73 -0.15 0.14 16 29 C -0.12 0.47 5.39 -26.73 -0.14 0.32 16 30 H 0.08 0.19 8.14 -51.93 -0.42 -0.24 16 31 H 0.08 0.20 4.79 -51.93 -0.25 -0.05 16 32 H 0.10 0.38 5.97 -51.93 -0.31 0.07 16 33 H 0.12 -0.11 7.15 -51.93 -0.37 -0.48 16 34 H 0.37 -0.88 8.70 45.56 0.40 -0.49 16 35 H -0.26 0.34 7.00 56.52 0.40 0.74 16 36 H -0.25 -0.33 7.11 56.52 0.40 0.07 16 37 H 0.18 -0.97 6.28 -52.49 -0.33 -1.30 16 38 H 0.43 -1.61 8.96 -40.82 -0.37 -1.98 16 39 H 0.16 -0.55 6.43 -52.49 -0.34 -0.89 16 40 H 0.40 -1.69 6.68 -40.82 -0.27 -1.97 16 41 H 0.08 0.05 8.14 -51.93 -0.42 -0.38 16 42 H 0.07 -0.14 8.14 -51.93 -0.42 -0.57 16 43 H 0.08 -0.04 8.14 -51.93 -0.42 -0.47 16 44 H 0.08 -0.04 6.50 -51.93 -0.34 -0.37 16 45 H 0.08 -0.25 8.14 -51.93 -0.42 -0.68 16 46 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 47 H 0.08 -0.36 8.14 -51.93 -0.42 -0.78 16 48 H 0.07 -0.36 8.14 -51.93 -0.42 -0.78 16 LS Contribution 393.92 15.07 5.94 5.94 Total: 0.00 -8.82 393.92 -10.18 -19.00 By element: Atomic # 1 Polarization: -6.55 SS G_CDS: -5.53 Total: -12.08 kcal Atomic # 6 Polarization: 2.02 SS G_CDS: -4.29 Total: -2.27 kcal Atomic # 7 Polarization: 0.97 SS G_CDS: -0.47 Total: 0.50 kcal Atomic # 8 Polarization: -2.90 SS G_CDS: -0.70 Total: -3.60 kcal Atomic # 9 Polarization: -0.72 SS G_CDS: 0.11 Total: -0.61 kcal Atomic # 14 Polarization: -1.65 SS G_CDS: -5.24 Total: -6.89 kcal Total LS contribution 5.94 Total: 5.94 kcal Total: -8.82 -10.18 -19.00 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17849236_12890568.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -185.824 kcal (2) G-P(sol) polarization free energy of solvation -8.819 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -194.644 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.184 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.004 kcal (6) G-S(sol) free energy of system = (1) + (5) -204.828 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.54 seconds