Wall clock time and date at job start Sun Mar 7 2021 15:01:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 C 1.39287 * 121.02931 * 2 1 4 4 C 1.46495 * 134.19935 * 359.92104 * 3 2 1 5 5 C 1.50691 * 126.60251 * 0.36265 * 4 3 2 6 6 O 1.42904 * 109.47318 * 284.99641 * 5 4 3 7 7 Si 1.86308 * 109.47381 * 164.99609 * 5 4 3 8 8 C 1.34185 * 106.79809 * 180.33948 * 4 3 2 9 9 N 1.36944 * 109.95652 * 0.02562 * 8 4 3 10 10 C 1.37160 * 110.11123 * 359.97438 * 9 8 4 11 11 N 1.32820 * 132.96788 * 180.02562 * 10 9 8 12 12 C 1.31306 * 121.89511 * 179.97438 * 11 10 9 13 13 C 1.39746 * 121.02938 * 179.77596 * 2 1 3 14 14 C 1.47668 * 120.45645 * 359.97438 * 13 2 1 15 15 O 1.21571 * 119.99899 * 353.70959 * 14 13 2 16 16 N 1.34779 * 119.99760 * 173.70910 * 14 13 2 17 17 C 1.46498 * 119.99646 * 180.02562 * 16 14 13 18 18 H 1.09002 * 109.46857 * 324.98991 * 17 16 14 19 19 C 1.52994 * 109.47493 * 84.99453 * 17 16 14 20 20 C 1.52996 * 109.47169 * 179.97438 * 19 17 16 21 21 C 1.53006 * 109.47300 * 300.00171 * 20 19 17 22 22 H 1.09001 * 109.46850 * 300.00169 * 21 20 19 23 23 O 1.42904 * 109.47274 * 179.97438 * 21 20 19 24 24 C 1.42898 * 114.00009 * 89.99894 * 23 21 20 25 25 F 1.39900 * 109.47128 * 59.99845 * 24 23 21 26 26 F 1.39898 * 109.47010 * 179.97438 * 24 23 21 27 27 F 1.39898 * 109.47273 * 300.00267 * 24 23 21 28 28 C 1.53003 * 109.47078 * 59.99667 * 21 20 19 29 29 C 1.52996 * 109.47327 * 300.00317 * 28 21 20 30 30 H 1.09007 * 109.46822 * 263.92867 * 1 2 3 31 31 H 1.08997 * 109.46958 * 23.92864 * 1 2 3 32 32 H 1.08997 * 109.46943 * 143.92928 * 1 2 3 33 33 H 1.09000 * 109.47023 * 44.99830 * 5 4 3 34 34 H 0.96697 * 113.99975 * 300.00249 * 6 5 4 35 35 H 1.48499 * 109.99506 * 58.68028 * 7 5 4 36 36 H 1.48500 * 109.99940 * 179.97438 * 7 5 4 37 37 H 1.07998 * 125.01910 * 179.97438 * 8 4 3 38 38 H 0.96994 * 124.94687 * 180.02562 * 9 8 4 39 39 H 1.07992 * 119.31560 * 179.97438 * 12 11 10 40 40 H 0.96996 * 120.00335 * 359.97438 * 16 14 13 41 41 H 1.08998 * 109.47588 * 300.00152 * 19 17 16 42 42 H 1.09005 * 109.46771 * 60.00167 * 19 17 16 43 43 H 1.09001 * 109.47307 * 60.00061 * 20 19 17 44 44 H 1.09001 * 109.47187 * 180.02562 * 20 19 17 45 45 H 1.08997 * 109.47035 * 179.97438 * 28 21 20 46 46 H 1.09005 * 109.46684 * 60.00050 * 28 21 20 47 47 H 1.09001 * 109.47187 * 179.97438 * 29 28 21 48 48 H 1.09002 * 109.46901 * 300.00281 * 29 28 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.2251 1.1936 0.0000 4 6 1.8516 2.6101 -0.0014 5 6 0.4527 3.1705 0.0042 6 8 -0.1256 3.0210 -1.2941 7 14 0.5093 4.9774 0.4544 8 6 2.9948 3.3126 -0.0082 9 7 4.0669 2.4606 -0.0118 10 6 3.6348 1.1588 -0.0067 11 7 4.2720 -0.0066 -0.0070 12 6 3.6267 -1.1501 -0.0008 13 6 2.2274 -1.1975 0.0047 14 6 1.5225 -2.4950 0.0103 15 8 0.3128 -2.5291 0.1263 16 7 2.2203 -3.6415 -0.1131 17 6 1.5208 -4.9287 -0.1081 18 1 0.6690 -4.8767 0.5700 19 6 1.0290 -5.2476 -1.5213 20 6 0.2992 -6.5922 -1.5161 21 6 1.2567 -7.6905 -1.0494 22 1 2.1086 -7.7421 -1.7275 23 8 0.5748 -8.9464 -1.0439 24 6 0.6648 -9.6620 -2.2775 25 9 2.0081 -9.9229 -2.5684 26 9 -0.0313 -10.8705 -2.1674 27 9 0.1062 -8.8933 -3.3044 28 6 1.7486 -7.3716 0.3639 29 6 2.4784 -6.0270 0.3587 30 1 -0.3633 -0.1087 1.0220 31 1 -0.3633 0.9393 -0.4168 32 1 -0.3633 -0.8306 -0.6051 33 1 -0.1512 2.6327 0.7351 34 1 0.3608 3.4748 -1.9959 35 1 1.3558 5.7164 -0.5164 36 1 -0.8641 5.5420 0.4628 37 1 3.0598 4.3906 -0.0113 38 1 4.9965 2.7373 -0.0164 39 1 4.1870 -2.0734 -0.0017 40 1 3.1854 -3.6143 -0.2060 41 1 0.3472 -4.4649 -1.8540 42 1 1.8810 -5.2996 -2.1993 43 1 -0.5527 -6.5406 -0.8380 44 1 -0.0508 -6.8195 -2.5230 45 1 2.4303 -8.1543 0.6966 46 1 0.8967 -7.3200 1.0420 47 1 2.8284 -5.7997 1.3657 48 1 3.3302 -6.0786 -0.3195 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17849236_12890568.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 15:01:42 Heat of formation + Delta-G solvation = -204.635816 kcal Electronic energy + Delta-G solvation = -38079.288763 eV Core-core repulsion = 32492.799198 eV Total energy + Delta-G solvation = -5586.489565 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 400.144 amu Computer time = 1.42 seconds Orbital eigenvalues (eV) -51.26078 -49.01559 -48.94315 -42.85041 -41.30843 -40.23633 -38.83895 -38.02317 -37.74227 -35.27963 -34.74901 -32.00004 -31.95062 -31.46573 -29.68015 -28.78460 -26.57302 -26.27115 -24.82910 -24.09964 -23.95103 -23.19723 -21.72031 -21.35274 -20.65557 -20.42424 -19.97017 -19.73736 -19.30056 -18.77678 -17.81567 -17.62071 -17.19914 -16.87672 -16.67003 -16.38530 -16.21660 -15.97422 -15.77169 -15.73609 -15.62311 -15.45935 -15.38171 -15.35789 -15.14643 -15.09836 -15.06949 -14.71996 -14.66045 -14.32164 -14.04150 -14.03171 -13.90543 -13.72503 -13.58551 -13.32315 -13.23446 -13.21718 -12.95180 -12.66719 -12.44884 -12.23401 -12.09049 -11.81275 -11.58217 -11.25791 -11.16985 -11.12189 -10.58742 -10.26827 -10.14365 -9.61289 -9.12881 -4.84138 -0.33684 -0.06740 0.80864 1.35411 1.42477 1.62480 1.68966 1.81275 1.96855 2.04949 2.10846 2.77256 2.94300 3.04135 3.31880 3.44722 3.49771 3.52807 3.54435 3.64421 3.70928 3.72938 3.84984 3.90086 3.98238 4.09382 4.14956 4.24824 4.27731 4.31703 4.38198 4.46636 4.52848 4.61541 4.64913 4.70044 4.76596 4.78595 4.97069 5.00835 5.04995 5.06358 5.08793 5.19641 5.21859 5.28340 5.35823 5.41033 5.50909 5.74308 6.22567 6.49797 6.59341 6.84027 7.19336 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.121 4.121 2 C 0.062 3.938 3 C -0.166 4.166 4 C -0.197 4.197 5 C -0.058 4.058 6 O -0.550 6.550 7 Si 0.779 3.221 8 C 0.090 3.910 9 N -0.560 5.560 10 C 0.288 3.712 11 N -0.516 5.516 12 C 0.181 3.819 13 C -0.241 4.241 14 C 0.571 3.429 15 O -0.564 6.564 16 N -0.709 5.709 17 C 0.144 3.856 18 H 0.075 0.925 19 C -0.120 4.120 20 C -0.141 4.141 21 C 0.078 3.922 22 H 0.097 0.903 23 O -0.375 6.375 24 C 0.596 3.404 25 F -0.174 7.174 26 F -0.150 7.150 27 F -0.176 7.176 28 C -0.107 4.107 29 C -0.114 4.114 30 H 0.077 0.923 31 H 0.081 0.919 32 H 0.079 0.921 33 H 0.109 0.891 34 H 0.385 0.615 35 H -0.259 1.259 36 H -0.309 1.309 37 H 0.220 0.780 38 H 0.438 0.562 39 H 0.196 0.804 40 H 0.414 0.586 41 H 0.056 0.944 42 H 0.083 0.917 43 H 0.072 0.928 44 H 0.073 0.927 45 H 0.094 0.906 46 H 0.076 0.924 47 H 0.097 0.903 48 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.714 4.530 2.358 9.251 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.177 4.177 2 C 0.054 3.946 3 C -0.173 4.173 4 C -0.204 4.204 5 C -0.167 4.167 6 O -0.358 6.358 7 Si 0.682 3.318 8 C -0.037 4.037 9 N -0.167 5.167 10 C 0.055 3.945 11 N -0.229 5.229 12 C 0.013 3.987 13 C -0.248 4.248 14 C 0.359 3.641 15 O -0.444 6.444 16 N -0.361 5.361 17 C 0.040 3.960 18 H 0.093 0.907 19 C -0.159 4.159 20 C -0.180 4.180 21 C 0.023 3.977 22 H 0.115 0.885 23 O -0.299 6.299 24 C 0.504 3.496 25 F -0.156 7.156 26 F -0.131 7.131 27 F -0.159 7.159 28 C -0.145 4.145 29 C -0.152 4.152 30 H 0.095 0.905 31 H 0.099 0.901 32 H 0.097 0.903 33 H 0.127 0.873 34 H 0.234 0.766 35 H -0.184 1.184 36 H -0.237 1.237 37 H 0.236 0.764 38 H 0.279 0.721 39 H 0.213 0.787 40 H 0.252 0.748 41 H 0.075 0.925 42 H 0.102 0.898 43 H 0.091 0.909 44 H 0.092 0.908 45 H 0.113 0.887 46 H 0.095 0.905 47 H 0.115 0.885 48 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges 7.231 5.037 2.636 9.198 hybrid contribution -0.403 -0.502 -1.701 1.819 sum 6.827 4.536 0.935 8.250 Atomic orbital electron populations 1.21081 0.89564 1.03917 1.03135 1.20060 0.96965 0.90254 0.87369 1.19743 0.93268 0.94354 1.09931 1.20701 0.96054 0.90324 1.13317 1.24727 0.90560 1.13744 0.87621 1.86585 1.55105 1.76651 1.17476 0.94091 0.79239 0.70165 0.88298 1.22317 0.84028 0.97192 1.00152 1.41602 1.10584 1.01762 1.62705 1.18774 0.89491 0.86851 0.99401 1.66515 1.40866 0.96477 1.19089 1.22996 0.89641 0.95334 0.90778 1.20526 0.95480 0.93362 1.15432 1.17987 0.86449 0.84024 0.75614 1.90753 1.15140 1.87466 1.51055 1.45778 1.11438 1.04711 1.74143 1.21048 0.96051 0.82178 0.96740 0.90716 1.21806 1.00831 0.95725 0.97540 1.22106 0.98994 0.94095 1.02777 1.22870 0.94580 0.78785 1.01442 0.88549 1.88375 1.75924 1.35722 1.29859 1.19558 0.74166 0.77119 0.78784 1.93260 1.34752 1.94075 1.93558 1.93265 1.79505 1.44482 1.95862 1.93261 1.85625 1.75578 1.61406 1.21553 1.01661 0.98181 0.93135 1.21751 0.97951 0.91138 1.04344 0.90489 0.90079 0.90279 0.87304 0.76565 1.18411 1.23711 0.76401 0.72052 0.78705 0.74757 0.92529 0.89826 0.90918 0.90811 0.88743 0.90481 0.88487 0.88553 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.98 8.45 71.24 0.60 -0.38 16 2 C 0.06 0.44 5.98 -19.24 -0.12 0.32 16 3 C -0.17 -0.80 6.16 -20.19 -0.12 -0.93 16 4 C -0.20 0.11 5.57 -18.64 -0.10 0.00 16 5 C -0.06 0.06 1.88 71.23 0.13 0.19 16 6 O -0.55 -1.26 11.64 -148.98 -1.73 -3.00 16 7 Si 0.78 -4.19 30.83 68.60 2.11 -2.08 16 8 C 0.09 -0.55 10.44 82.97 0.87 0.32 16 9 N -0.56 2.19 6.04 -192.25 -1.16 1.03 16 10 C 0.29 0.94 8.42 134.02 1.13 2.07 16 11 N -0.52 -1.84 10.37 -191.74 -1.99 -3.83 16 12 C 0.18 0.05 10.67 85.20 0.91 0.96 16 13 C -0.24 -1.01 5.89 -19.99 -0.12 -1.13 16 14 C 0.57 2.55 7.68 86.73 0.67 3.22 16 15 O -0.56 -6.61 13.16 -3.94 -0.05 -6.66 16 16 N -0.71 2.38 5.03 -445.58 -2.24 0.14 16 17 C 0.14 -0.47 2.45 44.99 0.11 -0.36 16 18 H 0.07 0.12 7.58 -2.39 -0.02 0.11 16 19 C -0.12 0.22 5.49 30.59 0.17 0.39 16 20 C -0.14 0.15 5.39 30.60 0.17 0.31 16 21 C 0.08 -0.21 2.40 30.60 0.07 -0.14 16 22 H 0.10 -0.50 7.20 -2.39 -0.02 -0.52 16 23 O -0.37 -0.71 10.24 -148.98 -1.52 -2.24 16 24 C 0.60 1.54 3.71 113.37 0.42 1.96 16 25 F -0.17 -0.33 16.61 44.97 0.75 0.42 16 26 F -0.15 -0.72 17.53 44.97 0.79 0.06 16 27 F -0.18 -0.55 15.44 44.97 0.69 0.15 16 28 C -0.11 0.64 5.57 30.59 0.17 0.82 16 29 C -0.11 1.01 5.39 30.60 0.16 1.17 16 30 H 0.08 0.62 8.14 -2.38 -0.02 0.60 16 31 H 0.08 0.63 4.79 -2.39 -0.01 0.62 16 32 H 0.08 0.92 5.97 -2.39 -0.01 0.91 16 33 H 0.11 0.02 7.15 -2.39 -0.02 0.00 16 34 H 0.39 -1.55 8.70 -74.06 -0.64 -2.20 16 35 H -0.26 1.32 7.00 99.48 0.70 2.02 16 36 H -0.31 -1.22 7.11 99.48 0.71 -0.51 16 37 H 0.22 -3.04 6.28 -2.91 -0.02 -3.06 16 38 H 0.44 -4.10 8.96 -92.71 -0.83 -4.93 16 39 H 0.20 -1.65 6.43 -2.91 -0.02 -1.66 16 40 H 0.41 -4.09 6.68 -92.71 -0.62 -4.71 16 41 H 0.06 0.19 8.14 -2.39 -0.02 0.17 16 42 H 0.08 -0.39 8.14 -2.38 -0.02 -0.41 16 43 H 0.07 0.08 8.14 -2.39 -0.02 0.06 16 44 H 0.07 0.03 6.50 -2.39 -0.02 0.01 16 45 H 0.09 -0.70 8.14 -2.39 -0.02 -0.72 16 46 H 0.08 -0.33 8.14 -2.38 -0.02 -0.34 16 47 H 0.10 -1.00 8.14 -2.39 -0.02 -1.02 16 48 H 0.10 -1.19 8.14 -2.39 -0.02 -1.21 16 Total: 0.00 -23.79 393.92 -0.22 -24.00 By element: Atomic # 1 Polarization: -15.82 SS G_CDS: -0.98 Total: -16.80 kcal Atomic # 6 Polarization: 3.68 SS G_CDS: 5.12 Total: 8.80 kcal Atomic # 7 Polarization: 2.73 SS G_CDS: -5.39 Total: -2.66 kcal Atomic # 8 Polarization: -8.59 SS G_CDS: -3.31 Total: -11.90 kcal Atomic # 9 Polarization: -1.60 SS G_CDS: 2.23 Total: 0.63 kcal Atomic # 14 Polarization: -4.19 SS G_CDS: 2.11 Total: -2.08 kcal Total: -23.79 -0.22 -24.00 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17849236_12890568.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -180.634 kcal (2) G-P(sol) polarization free energy of solvation -23.787 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -204.421 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.215 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.002 kcal (6) G-S(sol) free energy of system = (1) + (5) -204.636 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.42 seconds