Wall clock time and date at job start Sun Mar 7 2021 15:01:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86293 * 109.47041 * 2 1 4 4 C 1.50707 * 109.46442 * 119.99698 * 2 1 3 5 5 C 1.38894 * 119.66989 * 244.72416 * 4 2 1 6 6 C 1.36483 * 120.61023 * 179.69598 * 5 4 2 7 7 C 1.40069 * 119.82717 * 0.59849 * 6 5 4 8 8 C 1.41591 * 133.37886 * 179.70423 * 7 6 5 9 9 C 1.35856 * 107.72924 * 179.97438 * 8 7 6 10 10 C 1.47058 * 125.42952 * 180.02562 * 9 8 7 11 11 O 1.21646 * 119.99829 * 359.97438 * 10 9 8 12 12 N 1.34772 * 120.00139 * 180.02562 * 10 9 8 13 13 C 1.46507 * 119.99846 * 179.97438 * 12 10 9 14 14 H 1.08998 * 109.47146 * 324.99586 * 13 12 10 15 15 C 1.53002 * 109.46890 * 85.00033 * 13 12 10 16 16 C 1.53003 * 109.46715 * 180.02562 * 15 13 12 17 17 C 1.53002 * 109.47040 * 299.99302 * 16 15 13 18 18 H 1.08998 * 109.47290 * 300.00270 * 17 16 15 19 19 O 1.42903 * 109.46968 * 180.02562 * 17 16 15 20 20 C 1.42892 * 114.00128 * 90.00421 * 19 17 16 21 21 F 1.39901 * 109.47049 * 59.99547 * 20 19 17 22 22 F 1.39894 * 109.47395 * 179.97438 * 20 19 17 23 23 F 1.39905 * 109.47073 * 300.00211 * 20 19 17 24 24 C 1.53002 * 109.46797 * 60.00748 * 17 16 15 25 25 C 1.53002 * 109.47018 * 204.99429 * 13 12 10 26 26 N 1.38151 * 109.14576 * 0.02562 * 9 8 7 27 27 C 1.37485 * 108.79272 * 359.97438 * 26 9 8 28 28 C 1.37712 * 119.67282 * 65.00315 * 4 2 1 29 29 H 0.96700 * 114.00311 * 300.00531 * 1 2 3 30 30 H 1.08999 * 109.47293 * 239.99660 * 2 1 3 31 31 H 1.48506 * 109.99973 * 299.99283 * 3 2 1 32 32 H 1.48493 * 110.00375 * 61.31384 * 3 2 1 33 33 H 1.07995 * 119.69738 * 0.02562 * 5 4 2 34 34 H 1.07996 * 120.08212 * 180.25542 * 6 5 4 35 35 H 1.08003 * 126.13365 * 0.02562 * 8 7 6 36 36 H 0.96995 * 120.00312 * 359.97438 * 12 10 9 37 37 H 1.08995 * 109.46964 * 299.99826 * 15 13 12 38 38 H 1.08998 * 109.47591 * 59.99825 * 15 13 12 39 39 H 1.09007 * 109.46809 * 179.97438 * 16 15 13 40 40 H 1.08997 * 109.47302 * 60.00124 * 16 15 13 41 41 H 1.08995 * 109.46964 * 179.97438 * 24 17 16 42 42 H 1.08998 * 109.47591 * 59.99707 * 24 17 16 43 43 H 1.08997 * 109.47743 * 300.00350 * 25 13 12 44 44 H 1.09007 * 109.46960 * 60.00331 * 25 13 12 45 45 H 0.96998 * 125.60369 * 180.02562 * 26 9 8 46 46 H 1.07999 * 120.09901 * 359.97388 * 28 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7104 1.2306 5 6 2.6462 -0.0035 2.1889 6 6 3.1046 -0.6263 3.3135 7 6 2.8642 -1.9935 3.4999 8 6 3.2015 -2.9093 4.5258 9 6 2.7027 -4.1238 4.1767 10 6 2.8296 -5.3569 4.9679 11 8 3.4219 -5.3397 6.0302 12 7 2.2906 -6.5063 4.5154 13 6 2.4176 -7.7349 5.3034 14 1 3.3837 -7.7448 5.8078 15 6 1.2979 -7.7909 6.3446 16 6 1.4309 -9.0737 7.1678 17 6 1.3272 -10.2872 6.2417 18 1 0.3610 -10.2777 5.7372 19 8 1.4508 -11.4853 7.0107 20 6 0.2075 -11.9946 7.4971 21 9 -0.6332 -12.2825 6.4166 22 9 0.4375 -13.1623 8.2324 23 9 -0.3993 -11.0379 8.3180 24 6 2.4469 -10.2311 5.2005 25 6 2.3135 -8.9480 4.3768 26 7 2.0571 -4.0158 2.9601 27 6 2.1444 -2.7141 2.5264 28 6 1.6817 -2.0552 1.3910 29 1 -0.3934 0.4418 0.7650 30 1 1.7924 -0.5139 -0.8899 31 1 1.5616 2.4678 -1.2086 32 1 1.5878 2.4586 1.2241 33 1 2.8365 1.0498 2.0454 34 1 3.6561 -0.0675 4.0551 35 1 3.7553 -2.6827 5.4249 36 1 1.8186 -6.5202 3.6682 37 1 1.3719 -6.9267 7.0046 38 1 0.3317 -7.7811 5.8401 39 1 0.6334 -9.1134 7.9100 40 1 2.3970 -9.0831 7.6724 41 1 2.3733 -11.0958 4.5410 42 1 3.4130 -10.2406 5.7050 43 1 1.3474 -8.9382 3.8723 44 1 3.1112 -8.9081 3.6350 45 1 1.6144 -4.7393 2.4896 46 1 1.1283 -2.5969 0.6382 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17849236_13158378.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 15:01:51 Heat of formation + Delta-G solvation = -217.559070 kcal Electronic energy + Delta-G solvation = -34883.392320 eV Core-core repulsion = 29517.305890 eV Total energy + Delta-G solvation = -5366.086430 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 385.133 amu Computer time = 1.37 seconds Orbital eigenvalues (eV) -51.28046 -49.03484 -48.96354 -42.72216 -41.17439 -40.11862 -39.03061 -37.98009 -36.97532 -35.05378 -33.29435 -32.01844 -31.42147 -30.42177 -29.97191 -27.00785 -26.28122 -24.67255 -24.02487 -23.50853 -22.80906 -21.97790 -21.58948 -21.08791 -20.47154 -19.99155 -19.81202 -19.44642 -18.48906 -17.92479 -17.52083 -16.85411 -16.74699 -16.56068 -16.25045 -16.07153 -15.83961 -15.75622 -15.61981 -15.50057 -15.47794 -15.39177 -15.16841 -15.15702 -15.06514 -14.88802 -14.71672 -14.61747 -14.54680 -14.30952 -14.03981 -13.94646 -13.37989 -13.19747 -13.07088 -12.83356 -12.55597 -12.52027 -12.29523 -12.16004 -12.07833 -11.65386 -11.54725 -11.44921 -11.23262 -10.96496 -10.59807 -10.31477 -9.34009 -8.83282 -4.86283 -0.37887 0.52690 0.78223 0.93769 1.34644 1.65192 1.71866 1.90316 2.01008 2.03818 2.16375 2.76211 2.92021 3.01802 3.41268 3.44742 3.47749 3.55845 3.66929 3.73861 3.77503 3.84938 3.91421 4.02191 4.04290 4.18964 4.24506 4.28875 4.32467 4.39405 4.46721 4.53456 4.58776 4.66816 4.71257 4.88554 4.91857 4.97866 4.98955 5.00597 5.02669 5.13239 5.24898 5.32090 5.37737 5.40800 5.53733 5.57492 5.97907 6.24311 6.43089 6.50958 6.93713 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.548 6.548 2 C -0.079 4.079 3 Si 0.767 3.233 4 C -0.086 4.086 5 C -0.149 4.149 6 C -0.060 4.060 7 C -0.135 4.135 8 C -0.120 4.120 9 C 0.012 3.988 10 C 0.587 3.413 11 O -0.558 6.558 12 N -0.707 5.707 13 C 0.142 3.858 14 H 0.078 0.922 15 C -0.121 4.121 16 C -0.142 4.142 17 C 0.078 3.922 18 H 0.096 0.904 19 O -0.374 6.374 20 C 0.596 3.404 21 F -0.174 7.174 22 F -0.149 7.149 23 F -0.176 7.176 24 C -0.108 4.108 25 C -0.114 4.114 26 N -0.563 5.563 27 C 0.108 3.892 28 C -0.108 4.108 29 H 0.386 0.614 30 H 0.129 0.871 31 H -0.306 1.306 32 H -0.283 1.283 33 H 0.144 0.856 34 H 0.145 0.855 35 H 0.154 0.846 36 H 0.413 0.587 37 H 0.058 0.942 38 H 0.084 0.916 39 H 0.075 0.925 40 H 0.074 0.926 41 H 0.094 0.906 42 H 0.078 0.922 43 H 0.096 0.904 44 H 0.096 0.904 45 H 0.432 0.568 46 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.382 0.092 -5.259 5.274 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.356 6.356 2 C -0.188 4.188 3 Si 0.673 3.327 4 C -0.089 4.089 5 C -0.167 4.167 6 C -0.078 4.078 7 C -0.139 4.139 8 C -0.147 4.147 9 C -0.098 4.098 10 C 0.374 3.626 11 O -0.436 6.436 12 N -0.358 5.358 13 C 0.038 3.962 14 H 0.096 0.904 15 C -0.159 4.159 16 C -0.180 4.180 17 C 0.023 3.977 18 H 0.114 0.886 19 O -0.299 6.299 20 C 0.504 3.496 21 F -0.157 7.157 22 F -0.131 7.131 23 F -0.158 7.158 24 C -0.146 4.146 25 C -0.151 4.151 26 N -0.169 5.169 27 C -0.003 4.003 28 C -0.128 4.128 29 H 0.235 0.765 30 H 0.146 0.854 31 H -0.234 1.234 32 H -0.210 1.210 33 H 0.161 0.839 34 H 0.163 0.837 35 H 0.171 0.829 36 H 0.250 0.750 37 H 0.077 0.923 38 H 0.102 0.898 39 H 0.094 0.906 40 H 0.093 0.907 41 H 0.113 0.887 42 H 0.097 0.903 43 H 0.114 0.886 44 H 0.115 0.885 45 H 0.273 0.727 46 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges 0.766 0.309 -5.025 5.093 hybrid contribution -1.856 -0.551 0.448 1.987 sum -1.089 -0.242 -4.577 4.711 Atomic orbital electron populations 1.86573 1.18440 1.80371 1.50227 1.25193 0.83423 1.11630 0.98522 0.93915 0.90457 0.72203 0.76124 1.20063 0.98559 0.93521 0.96710 1.20716 1.00934 1.00580 0.94514 1.20621 0.97789 0.91771 0.97634 1.18441 1.04322 0.95063 0.96074 1.21098 1.02710 0.90721 1.00167 1.19974 1.05047 0.95529 0.89257 1.17272 0.78411 0.82537 0.84375 1.90870 1.43815 1.85424 1.23455 1.45776 1.56860 1.08018 1.25166 1.21135 0.99605 0.83156 0.92313 0.90372 1.21809 0.99645 0.96805 0.97684 1.22112 1.04072 0.93352 0.98499 1.22862 1.02728 0.80444 0.91672 0.88581 1.88374 1.25425 1.45057 1.71000 1.19554 0.78577 0.75905 0.75569 1.93260 1.72819 1.93533 1.56054 1.93267 1.94585 1.48152 1.77088 1.93264 1.84271 1.64540 1.73761 1.21559 0.97638 0.99240 0.96131 1.21755 1.05378 0.90573 0.97428 1.41767 1.48371 1.09067 1.17705 1.18434 1.00799 0.84438 0.96626 1.20011 1.02727 0.94083 0.95987 0.76455 0.85376 1.23422 1.20983 0.83865 0.83690 0.82854 0.75044 0.92278 0.89753 0.90649 0.90750 0.88714 0.90333 0.88591 0.88539 0.72701 0.84511 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.23 12.83 -148.98 -1.91 -2.14 16 2 C -0.08 0.22 2.79 71.24 0.20 0.42 16 3 Si 0.77 -2.52 29.84 68.60 2.05 -0.47 16 4 C -0.09 0.15 5.36 -19.83 -0.11 0.04 16 5 C -0.15 0.30 8.59 22.02 0.19 0.49 16 6 C -0.06 0.02 10.06 22.30 0.22 0.24 16 7 C -0.13 -0.34 6.16 -21.36 -0.13 -0.47 16 8 C -0.12 -0.45 10.53 22.54 0.24 -0.21 16 9 C 0.01 0.01 6.97 39.91 0.28 0.29 16 10 C 0.59 1.38 7.76 86.56 0.67 2.06 16 11 O -0.56 -6.04 16.50 -4.18 -0.07 -6.11 16 12 N -0.71 3.89 5.07 -446.14 -2.26 1.62 16 13 C 0.14 -0.71 2.45 44.99 0.11 -0.60 16 14 H 0.08 -0.01 7.58 -2.39 -0.02 -0.03 16 15 C -0.12 0.44 5.49 30.60 0.17 0.60 16 16 C -0.14 0.36 5.39 30.60 0.17 0.52 16 17 C 0.08 -0.31 2.40 30.60 0.07 -0.24 16 18 H 0.10 -0.62 7.20 -2.39 -0.02 -0.63 16 19 O -0.37 -0.31 10.24 -148.98 -1.53 -1.84 16 20 C 0.60 0.98 3.71 113.37 0.42 1.40 16 21 F -0.17 -0.17 16.61 44.97 0.75 0.57 16 22 F -0.15 -0.60 17.53 44.97 0.79 0.19 16 23 F -0.18 -0.37 15.44 44.97 0.69 0.33 16 24 C -0.11 0.79 5.58 30.61 0.17 0.96 16 25 C -0.11 1.18 5.39 30.61 0.17 1.34 16 26 N -0.56 2.02 6.07 -177.19 -1.08 0.94 16 27 C 0.11 0.03 7.25 39.13 0.28 0.31 16 28 C -0.11 0.14 9.69 22.37 0.22 0.35 16 29 H 0.39 -1.80 8.70 -74.06 -0.64 -2.45 16 30 H 0.13 -0.61 7.96 -2.39 -0.02 -0.63 16 31 H -0.31 -1.45 7.11 99.48 0.71 -0.75 16 32 H -0.28 -0.17 7.01 99.48 0.70 0.53 16 33 H 0.14 -0.80 4.78 -2.91 -0.01 -0.81 16 34 H 0.15 -0.57 8.06 -2.91 -0.02 -0.59 16 35 H 0.15 0.56 8.06 -2.91 -0.02 0.53 16 36 H 0.41 -5.02 7.66 -92.71 -0.71 -5.73 16 37 H 0.06 0.08 8.14 -2.39 -0.02 0.06 16 38 H 0.08 -0.55 8.14 -2.39 -0.02 -0.57 16 39 H 0.07 -0.08 6.50 -2.38 -0.02 -0.10 16 40 H 0.07 -0.04 8.14 -2.39 -0.02 -0.06 16 41 H 0.09 -0.82 8.14 -2.39 -0.02 -0.83 16 42 H 0.08 -0.44 8.14 -2.39 -0.02 -0.46 16 43 H 0.10 -1.33 8.14 -2.39 -0.02 -1.35 16 44 H 0.10 -1.13 8.14 -2.38 -0.02 -1.15 16 45 H 0.43 -4.62 8.12 -92.71 -0.75 -5.37 16 46 H 0.14 -0.52 8.06 -2.91 -0.02 -0.54 16 Total: 0.00 -20.08 389.48 -0.22 -20.31 By element: Atomic # 1 Polarization: -19.93 SS G_CDS: -0.99 Total: -20.92 kcal Atomic # 6 Polarization: 4.18 SS G_CDS: 3.34 Total: 7.52 kcal Atomic # 7 Polarization: 5.90 SS G_CDS: -3.34 Total: 2.56 kcal Atomic # 8 Polarization: -6.58 SS G_CDS: -3.50 Total: -10.08 kcal Atomic # 9 Polarization: -1.14 SS G_CDS: 2.23 Total: 1.09 kcal Atomic # 14 Polarization: -2.52 SS G_CDS: 2.05 Total: -0.47 kcal Total: -20.08 -0.22 -20.31 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17849236_13158378.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -197.250 kcal (2) G-P(sol) polarization free energy of solvation -20.085 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -217.334 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.225 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.309 kcal (6) G-S(sol) free energy of system = (1) + (5) -217.559 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.37 seconds