Wall clock time and date at job start Sun Mar 7 2021 15:02:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42892 * 1 3 3 Si 1.86302 * 109.47330 * 2 1 4 4 C 1.50699 * 109.47043 * 119.99465 * 2 1 3 5 5 C 1.34186 * 126.54627 * 255.02231 * 4 2 1 6 6 N 1.36869 * 109.97350 * 179.97438 * 5 4 2 7 7 C 1.37405 * 109.97590 * 0.02562 * 6 5 4 8 8 C 1.39328 * 133.24937 * 179.97438 * 7 6 5 9 9 C 1.36344 * 120.23836 * 180.02562 * 8 7 6 10 10 C 1.40174 * 120.66887 * 0.02562 * 9 8 7 11 11 C 1.47653 * 119.97250 * 180.02562 * 10 9 8 12 12 O 1.21577 * 119.99640 * 179.97438 * 11 10 9 13 13 N 1.34779 * 120.00294 * 359.97438 * 11 10 9 14 14 C 1.46496 * 119.99805 * 180.02562 * 13 11 10 15 15 H 1.09000 * 109.47348 * 34.99529 * 14 13 11 16 16 C 1.53007 * 109.46894 * 154.99746 * 14 13 11 17 17 C 1.52995 * 109.46831 * 179.97438 * 16 14 13 18 18 C 1.53000 * 109.47399 * 300.00029 * 17 16 14 19 19 H 1.09000 * 109.46998 * 300.00007 * 18 17 16 20 20 O 1.42901 * 109.46930 * 180.02562 * 18 17 16 21 21 C 1.42901 * 114.00068 * 150.00186 * 20 18 17 22 22 F 1.39895 * 109.47097 * 59.99504 * 21 20 18 23 23 F 1.39899 * 109.47241 * 180.02562 * 21 20 18 24 24 F 1.39909 * 109.46875 * 300.00172 * 21 20 18 25 25 C 1.52998 * 109.47020 * 60.00570 * 18 17 16 26 26 C 1.53000 * 109.47038 * 274.99593 * 14 13 11 27 27 C 1.39188 * 120.04881 * 0.02562 * 10 9 8 28 28 C 1.39222 * 119.39502 * 359.97438 * 27 10 9 29 29 H 0.96703 * 114.00117 * 60.00270 * 1 2 3 30 30 H 1.09001 * 109.47652 * 239.99670 * 2 1 3 31 31 H 1.48507 * 109.99799 * 298.68114 * 3 2 1 32 32 H 1.48497 * 110.00321 * 59.99581 * 3 2 1 33 33 H 1.08007 * 125.01228 * 0.02562 * 5 4 2 34 34 H 0.96993 * 125.01185 * 180.26932 * 6 5 4 35 35 H 1.08007 * 119.87954 * 359.97438 * 8 7 6 36 36 H 1.08001 * 119.66832 * 179.97438 * 9 8 7 37 37 H 0.96996 * 119.99739 * 359.97438 * 13 11 10 38 38 H 1.08997 * 109.47038 * 299.99866 * 16 14 13 39 39 H 1.08997 * 109.46712 * 60.00205 * 16 14 13 40 40 H 1.09006 * 109.47462 * 60.00538 * 17 16 14 41 41 H 1.09003 * 109.47267 * 179.97438 * 17 16 14 42 42 H 1.08991 * 109.47429 * 59.99736 * 25 18 17 43 43 H 1.09006 * 109.46955 * 180.02562 * 25 18 17 44 44 H 1.09000 * 109.46998 * 300.00150 * 26 14 13 45 45 H 1.08998 * 109.47272 * 60.00251 * 26 14 13 46 46 H 1.08002 * 120.29851 * 180.02562 * 27 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7103 1.2305 5 6 2.4602 -0.1386 2.3232 6 7 2.8018 -1.1003 3.2351 7 6 2.4950 -2.3454 2.7416 8 6 2.6341 -3.6349 3.2505 9 6 2.2313 -4.7103 2.5155 10 6 1.6737 -4.5369 1.2412 11 6 1.2422 -5.7124 0.4587 12 8 0.7580 -5.5625 -0.6464 13 7 1.3850 -6.9514 0.9695 14 6 0.9574 -8.1176 0.1928 15 1 1.1434 -7.9372 -0.8659 16 6 1.7444 -9.3489 0.6464 17 6 1.2973 -10.5670 -0.1643 18 6 -0.1974 -10.8068 0.0577 19 1 -0.3831 -10.9870 1.1165 20 8 -0.6147 -11.9448 -0.6991 21 6 -1.7018 -12.6649 -0.1143 22 9 -2.8101 -11.8197 0.0055 23 9 -2.0311 -13.7541 -0.9281 24 9 -1.3279 -13.1260 1.1526 25 6 -0.9843 -9.5756 -0.3960 26 6 -0.5374 -8.3577 0.4143 27 6 1.5264 -3.2576 0.7130 28 6 1.9369 -2.1579 1.4615 29 1 -0.3933 0.4417 -0.7651 30 1 1.7924 -0.5139 -0.8899 31 1 1.5878 2.4585 -1.2243 32 1 1.5615 2.4680 1.2084 33 1 2.5957 0.9239 2.4627 34 1 3.1985 -0.9280 4.1033 35 1 3.0633 -3.7832 4.2305 36 1 2.3438 -5.7058 2.9188 37 1 1.7716 -7.0710 1.8510 38 1 2.8092 -9.1779 0.4886 39 1 1.5582 -9.5293 1.7051 40 1 1.4831 -10.3869 -1.2232 41 1 1.8582 -11.4441 0.1585 42 1 -0.7985 -9.3954 -1.4547 43 1 -2.0492 -9.7463 -0.2374 44 1 -0.7234 -8.5381 1.4730 45 1 -1.0980 -7.4805 0.0912 46 1 1.0969 -3.1194 -0.2683 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17849236_13287722.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 15:02:06 Heat of formation + Delta-G solvation = -217.669014 kcal Electronic energy + Delta-G solvation = -35175.435919 eV Core-core repulsion = 29809.344722 eV Total energy + Delta-G solvation = -5366.091197 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 385.133 amu Computer time = 1.17 seconds Orbital eigenvalues (eV) -51.14824 -48.88464 -48.84089 -42.47030 -41.20131 -40.09384 -38.16225 -37.80484 -37.33669 -34.83792 -33.37393 -32.08053 -31.24622 -30.66373 -29.51546 -26.45692 -26.33125 -24.92705 -24.06040 -23.47594 -23.21426 -21.52142 -21.32641 -20.55183 -20.34313 -19.86814 -19.64123 -19.08411 -18.45949 -18.41486 -17.67571 -17.04849 -16.82821 -16.22957 -15.94400 -15.92312 -15.79777 -15.60705 -15.47789 -15.40967 -15.26507 -15.24780 -15.06641 -15.00649 -14.97468 -14.78495 -14.74249 -14.56497 -14.36376 -14.14539 -13.91019 -13.77995 -13.44934 -13.40594 -13.07956 -12.82431 -12.71848 -12.53335 -12.35013 -12.17697 -12.11220 -11.79338 -11.68894 -11.25903 -10.82369 -10.76661 -10.36315 -10.07376 -9.31515 -8.82205 -4.98538 -0.04713 0.19493 0.86586 1.27589 1.46377 1.56589 1.91984 1.99016 1.99589 2.02756 2.17517 2.95871 3.02241 3.11748 3.39574 3.44772 3.48674 3.58343 3.68493 3.74808 3.75712 3.83299 3.92877 3.94254 3.95434 4.11040 4.17751 4.24603 4.26128 4.37418 4.40721 4.49440 4.53092 4.59226 4.68616 4.78220 4.80252 4.91658 4.97342 5.01752 5.05876 5.12613 5.26226 5.30382 5.37251 5.45701 5.54740 5.60538 5.98409 6.37273 6.53104 6.54125 7.30868 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.042 4.042 3 Si 0.683 3.317 4 C -0.145 4.145 5 C 0.064 3.936 6 N -0.585 5.585 7 C 0.119 3.881 8 C -0.133 4.133 9 C -0.067 4.067 10 C -0.170 4.170 11 C 0.567 3.433 12 O -0.536 6.536 13 N -0.726 5.726 14 C 0.142 3.858 15 H 0.095 0.905 16 C -0.123 4.123 17 C -0.110 4.110 18 C 0.083 3.917 19 H 0.083 0.917 20 O -0.367 6.367 21 C 0.594 3.406 22 F -0.174 7.174 23 F -0.142 7.142 24 F -0.176 7.176 25 C -0.145 4.145 26 C -0.127 4.127 27 C 0.009 3.991 28 C -0.102 4.102 29 H 0.378 0.622 30 H 0.074 0.926 31 H -0.259 1.259 32 H -0.255 1.255 33 H 0.177 0.823 34 H 0.422 0.578 35 H 0.128 0.872 36 H 0.128 0.872 37 H 0.399 0.601 38 H 0.084 0.916 39 H 0.074 0.926 40 H 0.084 0.916 41 H 0.083 0.917 42 H 0.083 0.917 43 H 0.080 0.920 44 H 0.068 0.932 45 H 0.080 0.920 46 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.105 2.600 4.517 8.027 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.153 4.153 3 Si 0.583 3.417 4 C -0.152 4.152 5 C -0.063 4.063 6 N -0.187 5.187 7 C 0.011 3.989 8 C -0.154 4.154 9 C -0.087 4.087 10 C -0.174 4.174 11 C 0.355 3.645 12 O -0.414 6.414 13 N -0.378 5.378 14 C 0.038 3.962 15 H 0.113 0.887 16 C -0.161 4.161 17 C -0.148 4.148 18 C 0.028 3.972 19 H 0.101 0.899 20 O -0.290 6.290 21 C 0.502 3.498 22 F -0.156 7.156 23 F -0.123 7.123 24 F -0.158 7.158 25 C -0.183 4.183 26 C -0.165 4.165 27 C -0.011 4.011 28 C -0.107 4.107 29 H 0.226 0.774 30 H 0.092 0.908 31 H -0.184 1.184 32 H -0.179 1.179 33 H 0.193 0.807 34 H 0.260 0.740 35 H 0.146 0.854 36 H 0.146 0.854 37 H 0.235 0.765 38 H 0.103 0.897 39 H 0.093 0.907 40 H 0.103 0.897 41 H 0.102 0.898 42 H 0.102 0.898 43 H 0.099 0.901 44 H 0.087 0.913 45 H 0.099 0.901 46 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges 5.751 3.227 4.226 7.833 hybrid contribution -1.079 -0.246 0.637 1.277 sum 4.672 2.981 4.863 7.373 Atomic orbital electron populations 1.86633 1.18078 1.80028 1.49531 1.24072 0.84076 1.10002 0.97109 0.95265 0.91414 0.74339 0.80639 1.19521 1.07856 0.91199 0.96604 1.21681 1.01121 0.94374 0.89076 1.41710 1.54876 1.04124 1.17964 1.18423 0.99905 0.86540 0.94068 1.19661 1.05750 0.88825 1.01118 1.20567 0.96827 0.98307 0.93007 1.19521 1.08402 0.93206 0.96311 1.18181 0.77753 0.82871 0.85659 1.90795 1.44384 1.85982 1.20218 1.45916 1.65003 1.05583 1.21294 1.21050 0.93448 0.84174 0.97556 0.88691 1.21782 1.00885 0.92952 1.00522 1.21535 0.91962 0.98705 1.02577 1.22665 0.96288 0.82933 0.95359 0.89860 1.88362 1.47863 1.43057 1.49766 1.19575 0.78466 0.77172 0.74581 1.93264 1.55353 1.71293 1.95724 1.93286 1.91935 1.53651 1.73445 1.93262 1.91189 1.89243 1.42127 1.22161 1.00718 0.93340 1.02080 1.21881 0.96014 0.98124 1.00514 1.20659 0.92391 0.89216 0.98821 1.18918 1.04493 0.92906 0.94356 0.77446 0.90776 1.18404 1.17935 0.80650 0.74039 0.85413 0.85430 0.76503 0.89699 0.90727 0.89733 0.89796 0.89838 0.90115 0.91306 0.90145 0.84517 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.10 12.86 -35.23 -0.45 -1.55 16 2 C -0.04 -0.02 3.05 36.01 0.11 0.09 16 3 Si 0.68 -0.99 30.80 -169.99 -5.23 -6.22 16 4 C -0.14 -0.21 5.61 -102.68 -0.58 -0.79 16 5 C 0.06 -0.05 10.43 -16.73 -0.17 -0.22 16 6 N -0.58 0.85 6.05 -10.61 -0.06 0.79 16 7 C 0.12 0.09 7.27 -83.96 -0.61 -0.52 16 8 C -0.13 0.10 10.00 -39.86 -0.40 -0.30 16 9 C -0.07 0.05 9.46 -39.54 -0.37 -0.32 16 10 C -0.17 -0.32 5.87 -104.97 -0.62 -0.94 16 11 C 0.57 1.50 7.73 -12.42 -0.10 1.40 16 12 O -0.54 -3.43 15.99 5.30 0.08 -3.34 16 13 N -0.73 0.60 5.03 -54.81 -0.28 0.32 16 14 C 0.14 -0.14 2.45 -67.93 -0.17 -0.31 16 15 H 0.10 0.09 7.58 -51.93 -0.39 -0.31 16 16 C -0.12 0.40 5.39 -26.73 -0.14 0.26 16 17 C -0.11 0.25 5.57 -26.73 -0.15 0.10 16 18 C 0.08 -0.08 2.40 -26.73 -0.06 -0.14 16 19 H 0.08 -0.14 7.20 -51.93 -0.37 -0.52 16 20 O -0.37 -0.40 10.24 -35.23 -0.36 -0.76 16 21 C 0.59 0.81 3.71 101.05 0.37 1.18 16 22 F -0.17 -0.26 15.44 2.25 0.03 -0.23 16 23 F -0.14 -0.33 17.53 2.25 0.04 -0.29 16 24 F -0.18 -0.22 16.61 2.25 0.04 -0.18 16 25 C -0.14 0.08 5.39 -26.75 -0.14 -0.07 16 26 C -0.13 0.08 5.49 -26.75 -0.15 -0.07 16 27 C 0.01 0.03 9.64 -38.86 -0.37 -0.35 16 28 C -0.10 -0.27 6.34 -105.16 -0.67 -0.93 16 29 H 0.38 -0.73 8.74 45.56 0.40 -0.33 16 30 H 0.07 -0.03 7.96 -51.93 -0.41 -0.45 16 31 H -0.26 -0.24 7.11 56.52 0.40 0.16 16 32 H -0.25 -0.22 7.04 56.52 0.40 0.18 16 33 H 0.18 -0.60 6.30 -52.48 -0.33 -0.93 16 34 H 0.42 -1.97 8.96 -40.82 -0.37 -2.34 16 35 H 0.13 -0.42 8.06 -52.48 -0.42 -0.84 16 36 H 0.13 -0.50 6.36 -52.49 -0.33 -0.83 16 37 H 0.40 -1.42 6.60 -40.82 -0.27 -1.69 16 38 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 39 H 0.07 -0.32 8.14 -51.93 -0.42 -0.75 16 40 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 41 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 42 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 43 H 0.08 0.00 6.50 -51.93 -0.34 -0.34 16 44 H 0.07 -0.10 8.14 -51.93 -0.42 -0.53 16 45 H 0.08 0.12 8.14 -51.93 -0.42 -0.30 16 46 H 0.14 0.55 7.64 -52.49 -0.40 0.15 16 LS Contribution 389.43 15.07 5.87 5.87 Total: 0.00 -9.63 389.43 -9.95 -19.58 By element: Atomic # 1 Polarization: -6.65 SS G_CDS: -5.40 Total: -12.05 kcal Atomic # 6 Polarization: 2.29 SS G_CDS: -4.22 Total: -1.92 kcal Atomic # 7 Polarization: 1.45 SS G_CDS: -0.34 Total: 1.11 kcal Atomic # 8 Polarization: -4.93 SS G_CDS: -0.73 Total: -5.66 kcal Atomic # 9 Polarization: -0.81 SS G_CDS: 0.11 Total: -0.70 kcal Atomic # 14 Polarization: -0.99 SS G_CDS: -5.23 Total: -6.22 kcal Total LS contribution 5.87 Total: 5.87 kcal Total: -9.63 -9.95 -19.58 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17849236_13287722.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -198.092 kcal (2) G-P(sol) polarization free energy of solvation -9.631 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -207.723 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.946 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.577 kcal (6) G-S(sol) free energy of system = (1) + (5) -217.669 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.17 seconds