Wall clock time and date at job start Sun Mar 7 2021 15:02:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42892 * 1 3 3 Si 1.86302 * 109.47330 * 2 1 4 4 C 1.50699 * 109.47043 * 119.99465 * 2 1 3 5 5 C 1.34186 * 126.54627 * 255.02231 * 4 2 1 6 6 N 1.36869 * 109.97350 * 179.97438 * 5 4 2 7 7 C 1.37405 * 109.97590 * 0.02562 * 6 5 4 8 8 C 1.39328 * 133.24937 * 179.97438 * 7 6 5 9 9 C 1.36344 * 120.23836 * 180.02562 * 8 7 6 10 10 C 1.40174 * 120.66887 * 0.02562 * 9 8 7 11 11 C 1.47653 * 119.97250 * 180.02562 * 10 9 8 12 12 O 1.21577 * 119.99640 * 179.97438 * 11 10 9 13 13 N 1.34779 * 120.00294 * 359.97438 * 11 10 9 14 14 C 1.46496 * 119.99805 * 180.02562 * 13 11 10 15 15 H 1.09000 * 109.47348 * 34.99529 * 14 13 11 16 16 C 1.53007 * 109.46894 * 154.99746 * 14 13 11 17 17 C 1.52995 * 109.46831 * 179.97438 * 16 14 13 18 18 C 1.53000 * 109.47399 * 300.00029 * 17 16 14 19 19 H 1.09000 * 109.46998 * 300.00007 * 18 17 16 20 20 O 1.42901 * 109.46930 * 180.02562 * 18 17 16 21 21 C 1.42901 * 114.00068 * 150.00186 * 20 18 17 22 22 F 1.39895 * 109.47097 * 59.99504 * 21 20 18 23 23 F 1.39899 * 109.47241 * 180.02562 * 21 20 18 24 24 F 1.39909 * 109.46875 * 300.00172 * 21 20 18 25 25 C 1.52998 * 109.47020 * 60.00570 * 18 17 16 26 26 C 1.53000 * 109.47038 * 274.99593 * 14 13 11 27 27 C 1.39188 * 120.04881 * 0.02562 * 10 9 8 28 28 C 1.39222 * 119.39502 * 359.97438 * 27 10 9 29 29 H 0.96703 * 114.00117 * 60.00270 * 1 2 3 30 30 H 1.09001 * 109.47652 * 239.99670 * 2 1 3 31 31 H 1.48507 * 109.99799 * 298.68114 * 3 2 1 32 32 H 1.48497 * 110.00321 * 59.99581 * 3 2 1 33 33 H 1.08007 * 125.01228 * 0.02562 * 5 4 2 34 34 H 0.96993 * 125.01185 * 180.26932 * 6 5 4 35 35 H 1.08007 * 119.87954 * 359.97438 * 8 7 6 36 36 H 1.08001 * 119.66832 * 179.97438 * 9 8 7 37 37 H 0.96996 * 119.99739 * 359.97438 * 13 11 10 38 38 H 1.08997 * 109.47038 * 299.99866 * 16 14 13 39 39 H 1.08997 * 109.46712 * 60.00205 * 16 14 13 40 40 H 1.09006 * 109.47462 * 60.00538 * 17 16 14 41 41 H 1.09003 * 109.47267 * 179.97438 * 17 16 14 42 42 H 1.08991 * 109.47429 * 59.99736 * 25 18 17 43 43 H 1.09006 * 109.46955 * 180.02562 * 25 18 17 44 44 H 1.09000 * 109.46998 * 300.00150 * 26 14 13 45 45 H 1.08998 * 109.47272 * 60.00251 * 26 14 13 46 46 H 1.08002 * 120.29851 * 180.02562 * 27 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7103 1.2305 5 6 2.4602 -0.1386 2.3232 6 7 2.8018 -1.1003 3.2351 7 6 2.4950 -2.3454 2.7416 8 6 2.6341 -3.6349 3.2505 9 6 2.2313 -4.7103 2.5155 10 6 1.6737 -4.5369 1.2412 11 6 1.2422 -5.7124 0.4587 12 8 0.7580 -5.5625 -0.6464 13 7 1.3850 -6.9514 0.9695 14 6 0.9574 -8.1176 0.1928 15 1 1.1434 -7.9372 -0.8659 16 6 1.7444 -9.3489 0.6464 17 6 1.2973 -10.5670 -0.1643 18 6 -0.1974 -10.8068 0.0577 19 1 -0.3831 -10.9870 1.1165 20 8 -0.6147 -11.9448 -0.6991 21 6 -1.7018 -12.6649 -0.1143 22 9 -2.8101 -11.8197 0.0055 23 9 -2.0311 -13.7541 -0.9281 24 9 -1.3279 -13.1260 1.1526 25 6 -0.9843 -9.5756 -0.3960 26 6 -0.5374 -8.3577 0.4143 27 6 1.5264 -3.2576 0.7130 28 6 1.9369 -2.1579 1.4615 29 1 -0.3933 0.4417 -0.7651 30 1 1.7924 -0.5139 -0.8899 31 1 1.5878 2.4585 -1.2243 32 1 1.5615 2.4680 1.2084 33 1 2.5957 0.9239 2.4627 34 1 3.1985 -0.9280 4.1033 35 1 3.0633 -3.7832 4.2305 36 1 2.3438 -5.7058 2.9188 37 1 1.7716 -7.0710 1.8510 38 1 2.8092 -9.1779 0.4886 39 1 1.5582 -9.5293 1.7051 40 1 1.4831 -10.3869 -1.2232 41 1 1.8582 -11.4441 0.1585 42 1 -0.7985 -9.3954 -1.4547 43 1 -2.0492 -9.7463 -0.2374 44 1 -0.7234 -8.5381 1.4730 45 1 -1.0980 -7.4805 0.0912 46 1 1.0969 -3.1194 -0.2683 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17849236_13287722.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 15:02:04 Heat of formation + Delta-G solvation = -218.514166 kcal Electronic energy + Delta-G solvation = -35175.472568 eV Core-core repulsion = 29809.344722 eV Total energy + Delta-G solvation = -5366.127846 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 385.133 amu Computer time = 1.45 seconds Orbital eigenvalues (eV) -51.26340 -49.01858 -48.94529 -42.44861 -41.25915 -40.15745 -38.17301 -37.87498 -37.41028 -34.92489 -33.37625 -31.98390 -31.27175 -30.66619 -29.49928 -26.46545 -26.40817 -24.98563 -23.97311 -23.44839 -23.20375 -21.55366 -21.33016 -20.57801 -20.38992 -19.97334 -19.71979 -19.05853 -18.52375 -18.45210 -17.67110 -17.06921 -16.87050 -16.29709 -15.99781 -15.95254 -15.84461 -15.73973 -15.46975 -15.42107 -15.37232 -15.30887 -15.14798 -15.09038 -15.02484 -14.83533 -14.78160 -14.61956 -14.33670 -14.14451 -13.92282 -13.74454 -13.45873 -13.34140 -13.02190 -12.81982 -12.74308 -12.56545 -12.25324 -12.16334 -12.09635 -11.81916 -11.60223 -11.24341 -11.03563 -10.78675 -10.38068 -10.16300 -9.32155 -8.81065 -4.89098 -0.14503 0.21705 0.80241 1.33171 1.48554 1.63390 1.85244 1.96370 1.97485 2.09837 2.13888 2.89185 2.93867 3.03662 3.47254 3.51372 3.52951 3.63408 3.71894 3.79953 3.83139 3.89240 3.97193 4.02937 4.07799 4.15162 4.24031 4.26509 4.35893 4.42245 4.45564 4.54846 4.61518 4.63805 4.75237 4.79819 4.94934 5.01027 5.02718 5.05351 5.07892 5.19828 5.28592 5.35098 5.36756 5.44492 5.52315 5.57613 5.98861 6.52817 6.58402 6.62854 7.20751 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.564 6.564 2 C -0.065 4.065 3 Si 0.785 3.215 4 C -0.183 4.183 5 C 0.079 3.921 6 N -0.571 5.571 7 C 0.111 3.889 8 C -0.125 4.125 9 C -0.065 4.065 10 C -0.179 4.179 11 C 0.562 3.438 12 O -0.587 6.587 13 N -0.706 5.706 14 C 0.142 3.858 15 H 0.069 0.931 16 C -0.112 4.112 17 C -0.108 4.108 18 C 0.079 3.921 19 H 0.098 0.902 20 O -0.375 6.375 21 C 0.596 3.404 22 F -0.177 7.177 23 F -0.149 7.149 24 F -0.174 7.174 25 C -0.142 4.142 26 C -0.120 4.120 27 C -0.021 4.021 28 C -0.130 4.130 29 H 0.389 0.611 30 H 0.070 0.930 31 H -0.293 1.293 32 H -0.278 1.278 33 H 0.205 0.795 34 H 0.439 0.561 35 H 0.163 0.837 36 H 0.165 0.835 37 H 0.417 0.583 38 H 0.097 0.903 39 H 0.098 0.902 40 H 0.075 0.925 41 H 0.096 0.904 42 H 0.070 0.930 43 H 0.074 0.926 44 H 0.086 0.914 45 H 0.052 0.948 46 H 0.108 0.892 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.988 2.316 7.507 11.204 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.373 6.373 2 C -0.172 4.172 3 Si 0.687 3.313 4 C -0.189 4.189 5 C -0.049 4.049 6 N -0.175 5.175 7 C 0.001 3.999 8 C -0.145 4.145 9 C -0.085 4.085 10 C -0.183 4.183 11 C 0.352 3.648 12 O -0.468 6.468 13 N -0.358 5.358 14 C 0.037 3.963 15 H 0.088 0.912 16 C -0.150 4.150 17 C -0.146 4.146 18 C 0.024 3.976 19 H 0.116 0.884 20 O -0.299 6.299 21 C 0.504 3.496 22 F -0.159 7.159 23 F -0.131 7.131 24 F -0.156 7.156 25 C -0.180 4.180 26 C -0.159 4.159 27 C -0.041 4.041 28 C -0.134 4.134 29 H 0.239 0.761 30 H 0.088 0.912 31 H -0.220 1.220 32 H -0.204 1.204 33 H 0.221 0.779 34 H 0.281 0.719 35 H 0.180 0.820 36 H 0.182 0.818 37 H 0.255 0.745 38 H 0.115 0.885 39 H 0.116 0.884 40 H 0.094 0.906 41 H 0.115 0.885 42 H 0.089 0.911 43 H 0.093 0.907 44 H 0.104 0.896 45 H 0.071 0.929 46 H 0.126 0.874 Dipole moment (debyes) X Y Z Total from point charges 7.662 2.895 7.268 10.951 hybrid contribution -1.708 -0.163 -0.311 1.744 sum 5.954 2.733 6.957 9.556 Atomic orbital electron populations 1.86584 1.19460 1.80799 1.50496 1.24544 0.83295 1.12379 0.97019 0.94129 0.89647 0.70294 0.77210 1.19819 1.09879 0.91190 0.98051 1.22072 0.99133 0.95559 0.88137 1.41725 1.54079 1.03211 1.18490 1.18671 0.99802 0.87911 0.93507 1.20083 1.04418 0.87841 1.02194 1.20912 0.95711 1.00287 0.91550 1.19592 1.08990 0.92161 0.97543 1.18448 0.77196 0.84073 0.85126 1.90766 1.46830 1.86747 1.22465 1.45754 1.63791 1.04498 1.21794 1.21059 0.93689 0.85108 0.96446 0.91240 1.21739 1.00926 0.90792 1.01551 1.21557 0.90991 0.99592 1.02413 1.22851 0.96964 0.81862 0.95890 0.88377 1.88374 1.47626 1.43543 1.50343 1.19557 0.78511 0.77002 0.74545 1.93261 1.55557 1.71331 1.95736 1.93266 1.92045 1.54092 1.73690 1.93262 1.91159 1.89231 1.41934 1.22100 1.00574 0.93898 1.01435 1.21796 0.95925 0.96868 1.01323 1.20583 0.94392 0.90739 0.98404 1.19195 1.05285 0.93382 0.95575 0.76086 0.91238 1.22040 1.20429 0.77888 0.71949 0.81952 0.81796 0.74470 0.88495 0.88351 0.90616 0.88520 0.91105 0.90717 0.89568 0.92937 0.87392 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -3.86 12.86 -148.98 -1.92 -5.77 16 2 C -0.06 -0.19 3.05 71.24 0.22 0.03 16 3 Si 0.78 -2.06 30.80 68.60 2.11 0.06 16 4 C -0.18 -0.78 5.61 -18.61 -0.10 -0.88 16 5 C 0.08 -0.17 10.43 82.98 0.87 0.70 16 6 N -0.57 2.45 6.05 -187.48 -1.13 1.32 16 7 C 0.11 0.11 7.27 39.18 0.28 0.39 16 8 C -0.13 0.43 10.00 22.09 0.22 0.65 16 9 C -0.06 0.17 9.46 22.30 0.21 0.38 16 10 C -0.18 -0.95 5.87 -20.09 -0.12 -1.07 16 11 C 0.56 4.14 7.73 86.73 0.67 4.81 16 12 O -0.59 -9.87 15.99 -3.96 -0.06 -9.93 16 13 N -0.71 1.10 5.03 -445.58 -2.24 -1.14 16 14 C 0.14 -0.20 2.45 44.99 0.11 -0.09 16 15 H 0.07 0.29 7.58 -2.39 -0.02 0.27 16 16 C -0.11 0.90 5.39 30.60 0.16 1.07 16 17 C -0.11 0.58 5.57 30.59 0.17 0.75 16 18 C 0.08 -0.17 2.40 30.59 0.07 -0.10 16 19 H 0.10 -0.48 7.20 -2.39 -0.02 -0.50 16 20 O -0.37 -0.87 10.24 -148.98 -1.53 -2.40 16 21 C 0.60 1.70 3.71 113.37 0.42 2.12 16 22 F -0.18 -0.61 15.44 44.97 0.69 0.08 16 23 F -0.15 -0.75 17.53 44.97 0.79 0.03 16 24 F -0.17 -0.34 16.61 44.97 0.75 0.41 16 25 C -0.14 -0.02 5.39 30.58 0.16 0.15 16 26 C -0.12 0.03 5.49 30.58 0.17 0.20 16 27 C -0.02 -0.21 9.64 22.74 0.22 0.01 16 28 C -0.13 -0.91 6.34 -20.21 -0.13 -1.04 16 29 H 0.39 -0.43 8.74 -74.06 -0.65 -1.07 16 30 H 0.07 0.17 7.96 -2.39 -0.02 0.15 16 31 H -0.29 -0.81 7.11 99.48 0.71 -0.11 16 32 H -0.28 -0.33 7.04 99.48 0.70 0.37 16 33 H 0.20 -1.74 6.30 -2.91 -0.02 -1.76 16 34 H 0.44 -5.14 8.96 -92.71 -0.83 -5.97 16 35 H 0.16 -1.71 8.06 -2.91 -0.02 -1.73 16 36 H 0.16 -1.79 6.36 -2.91 -0.02 -1.81 16 37 H 0.42 -3.72 6.60 -92.71 -0.61 -4.33 16 38 H 0.10 -0.93 8.14 -2.39 -0.02 -0.94 16 39 H 0.10 -1.18 8.14 -2.39 -0.02 -1.20 16 40 H 0.08 -0.25 8.14 -2.38 -0.02 -0.27 16 41 H 0.10 -0.70 8.14 -2.39 -0.02 -0.72 16 42 H 0.07 0.18 8.14 -2.39 -0.02 0.16 16 43 H 0.07 0.10 6.50 -2.38 -0.02 0.08 16 44 H 0.09 -0.32 8.14 -2.39 -0.02 -0.34 16 45 H 0.05 0.30 8.14 -2.39 -0.02 0.28 16 46 H 0.11 1.51 7.64 -2.91 -0.02 1.49 16 Total: 0.00 -27.35 389.43 0.10 -27.24 By element: Atomic # 1 Polarization: -16.98 SS G_CDS: -0.97 Total: -17.95 kcal Atomic # 6 Polarization: 4.45 SS G_CDS: 3.61 Total: 8.06 kcal Atomic # 7 Polarization: 3.55 SS G_CDS: -3.37 Total: 0.17 kcal Atomic # 8 Polarization: -14.60 SS G_CDS: -3.50 Total: -18.10 kcal Atomic # 9 Polarization: -1.71 SS G_CDS: 2.23 Total: 0.52 kcal Atomic # 14 Polarization: -2.06 SS G_CDS: 2.11 Total: 0.06 kcal Total: -27.35 0.10 -27.24 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17849236_13287722.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -191.270 kcal (2) G-P(sol) polarization free energy of solvation -27.348 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -218.618 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.104 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.244 kcal (6) G-S(sol) free energy of system = (1) + (5) -218.514 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.45 seconds