Wall clock time and date at job start Sun Mar 7 2021 15:02:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 C 1.34665 * 124.85057 * 2 1 4 4 C 1.36761 * 108.39552 * 179.77653 * 3 2 1 5 5 C 1.47269 * 126.94357 * 180.24859 * 4 3 2 6 6 O 1.21628 * 120.00403 * 180.14629 * 5 4 3 7 7 N 1.34775 * 119.99757 * 0.14762 * 5 4 3 8 8 C 1.46501 * 120.00384 * 180.02562 * 7 5 4 9 9 H 1.09006 * 109.46760 * 34.99317 * 8 7 5 10 10 C 1.52994 * 109.47678 * 154.99634 * 8 7 5 11 11 C 1.52998 * 109.47362 * 180.02562 * 10 8 7 12 12 C 1.53001 * 109.46784 * 299.99699 * 11 10 8 13 13 H 1.08998 * 109.47452 * 300.00052 * 12 11 10 14 14 O 1.42898 * 109.46966 * 179.97438 * 12 11 10 15 15 C 1.42901 * 114.00140 * 150.00095 * 14 12 11 16 16 F 1.39902 * 109.46869 * 60.00087 * 15 14 12 17 17 F 1.39901 * 109.47442 * 180.02562 * 15 14 12 18 18 F 1.39906 * 109.47201 * 300.00669 * 15 14 12 19 19 C 1.53001 * 109.46898 * 60.00308 * 12 11 10 20 20 C 1.52998 * 109.47151 * 299.99466 * 19 12 11 21 21 C 1.46686 * 106.12033 * 0.36955 * 4 3 2 22 22 C 1.34485 * 106.32840 * 359.63139 * 21 4 3 23 23 C 1.50700 * 125.57287 * 180.20547 * 22 21 4 24 24 O 1.42902 * 109.47467 * 210.02691 * 23 22 21 25 25 Si 1.86302 * 109.47015 * 330.02508 * 23 22 21 26 26 H 1.08995 * 109.47260 * 269.97748 * 1 2 3 27 27 H 1.08999 * 109.46909 * 29.97657 * 1 2 3 28 28 H 1.08993 * 109.46986 * 149.97597 * 1 2 3 29 29 H 1.07998 * 125.79941 * 0.05326 * 3 2 1 30 30 H 0.97007 * 119.99926 * 359.97438 * 7 5 4 31 31 H 1.09004 * 109.47166 * 300.00341 * 10 8 7 32 32 H 1.09007 * 109.46951 * 59.99576 * 10 8 7 33 33 H 1.08998 * 109.47169 * 59.99925 * 11 10 8 34 34 H 1.09001 * 109.46814 * 180.02562 * 11 10 8 35 35 H 1.08998 * 109.47278 * 59.99637 * 19 12 11 36 36 H 1.09004 * 109.47139 * 179.97438 * 19 12 11 37 37 H 1.08998 * 109.47169 * 300.00238 * 20 19 12 38 38 H 1.09007 * 109.47242 * 179.97438 * 20 19 12 39 39 H 1.08002 * 126.83986 * 179.89990 * 21 4 3 40 40 H 1.09003 * 109.47560 * 90.02564 * 23 22 21 41 41 H 0.96701 * 113.99610 * 59.99825 * 24 23 22 42 42 H 1.48506 * 109.99894 * 58.68116 * 25 23 22 43 43 H 1.48501 * 110.00093 * 179.97438 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2345 1.1051 0.0000 4 6 3.5461 0.7177 0.0051 5 6 4.7284 1.5958 0.0120 6 8 5.8447 1.1129 0.0133 7 7 4.5734 2.9346 0.0169 8 6 5.7494 3.8083 0.0232 9 1 6.5445 3.3514 -0.5660 10 6 5.3808 5.1642 -0.5820 11 6 6.6092 6.0763 -0.5759 12 6 7.0904 6.2739 0.8629 13 1 6.2956 6.7309 1.4524 14 8 8.2380 7.1253 0.8686 15 6 8.3735 7.9104 2.0549 16 9 8.4816 7.0646 3.1640 17 9 9.5213 8.7047 1.9600 18 9 7.2499 8.7310 2.2020 19 6 7.4591 4.9179 1.4681 20 6 6.2307 4.0058 1.4621 21 6 3.5376 -0.7491 -0.0008 22 6 2.2448 -1.1197 -0.0004 23 6 1.7398 -2.5395 -0.0010 24 8 0.4809 -2.5972 -0.6747 25 14 2.9650 -3.6340 -0.8797 26 1 -0.3633 -0.0004 1.0276 27 1 -0.3633 0.8902 -0.5135 28 1 -0.3633 -0.8897 -0.5142 29 1 1.8767 2.1241 0.0008 30 1 3.6830 3.3198 0.0155 31 1 5.0382 5.0235 -1.6072 32 1 4.5856 5.6210 0.0073 33 1 7.4039 5.6193 -1.1654 34 1 6.3463 7.0425 -1.0067 35 1 8.2539 4.4609 0.8786 36 1 7.8024 5.0588 2.4931 37 1 5.4359 4.4628 2.0515 38 1 6.4935 3.0396 1.8928 39 1 4.3982 -1.4017 -0.0006 40 1 1.6181 -2.8824 1.0265 41 1 0.5143 -2.3058 -1.5962 42 1 4.2870 -3.5583 -0.2075 43 1 2.4789 -5.0372 -0.8866 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17849236_13287730.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 15:02:12 Heat of formation + Delta-G solvation = -227.084894 kcal Electronic energy + Delta-G solvation = -31081.590060 eV Core-core repulsion = 26099.768981 eV Total energy + Delta-G solvation = -4981.821079 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 349.133 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -51.15289 -48.88916 -48.84591 -42.51714 -40.99509 -39.78485 -38.00403 -37.73945 -34.75577 -33.82352 -32.07326 -31.67430 -29.91834 -27.64275 -26.50118 -26.09011 -24.25692 -23.98628 -22.84129 -21.51717 -20.97618 -20.53192 -20.34854 -19.87290 -19.64598 -19.04055 -17.61825 -17.25000 -17.01330 -16.84273 -16.55178 -16.16574 -15.88800 -15.75030 -15.61063 -15.51376 -15.47750 -15.25879 -15.25268 -15.05010 -15.02809 -14.97601 -14.65355 -14.54663 -14.31333 -14.11684 -13.89145 -13.54328 -13.43842 -13.42582 -13.22233 -12.96387 -12.75581 -12.35350 -12.24997 -12.13845 -11.98428 -11.68290 -11.25115 -10.81223 -10.77356 -10.03614 -9.59293 -9.25385 -5.03944 0.73502 0.86282 1.01448 1.36419 1.62047 1.82581 2.00178 2.05359 2.26066 2.66508 3.01822 3.08993 3.11351 3.40246 3.45248 3.48471 3.72017 3.73067 3.77679 3.79079 3.91920 3.95721 4.13254 4.16778 4.21255 4.24742 4.31356 4.38722 4.45304 4.53075 4.56342 4.68979 4.80075 4.85423 4.92026 4.95877 4.99113 5.10221 5.13820 5.30774 5.51359 5.66022 5.92788 6.10777 6.25916 6.62184 7.43928 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.049 3.951 2 N -0.423 5.423 3 C 0.050 3.950 4 C -0.227 4.227 5 C 0.592 3.408 6 O -0.540 6.540 7 N -0.729 5.729 8 C 0.144 3.856 9 H 0.095 0.905 10 C -0.123 4.123 11 C -0.110 4.110 12 C 0.083 3.917 13 H 0.083 0.917 14 O -0.366 6.366 15 C 0.594 3.406 16 F -0.174 7.174 17 F -0.142 7.142 18 F -0.176 7.176 19 C -0.145 4.145 20 C -0.126 4.126 21 C -0.136 4.136 22 C -0.020 4.020 23 C -0.043 4.043 24 O -0.542 6.542 25 Si 0.716 3.284 26 H 0.073 0.927 27 H 0.082 0.918 28 H 0.114 0.886 29 H 0.170 0.830 30 H 0.397 0.603 31 H 0.084 0.916 32 H 0.073 0.927 33 H 0.084 0.916 34 H 0.083 0.917 35 H 0.083 0.917 36 H 0.080 0.920 37 H 0.067 0.933 38 H 0.080 0.920 39 H 0.152 0.848 40 H 0.118 0.882 41 H 0.381 0.619 42 H -0.251 1.251 43 H -0.252 1.252 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.983 1.112 -3.360 7.828 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.092 4.092 2 N -0.098 5.098 3 C -0.086 4.086 4 C -0.238 4.238 5 C 0.381 3.619 6 O -0.417 6.417 7 N -0.380 5.380 8 C 0.039 3.961 9 H 0.113 0.887 10 C -0.161 4.161 11 C -0.148 4.148 12 C 0.028 3.972 13 H 0.101 0.899 14 O -0.290 6.290 15 C 0.502 3.498 16 F -0.156 7.156 17 F -0.123 7.123 18 F -0.158 7.158 19 C -0.183 4.183 20 C -0.165 4.165 21 C -0.160 4.160 22 C -0.129 4.129 23 C -0.153 4.153 24 O -0.348 6.348 25 Si 0.615 3.385 26 H 0.091 0.909 27 H 0.100 0.900 28 H 0.132 0.868 29 H 0.187 0.813 30 H 0.231 0.769 31 H 0.102 0.898 32 H 0.092 0.908 33 H 0.103 0.897 34 H 0.102 0.898 35 H 0.102 0.898 36 H 0.098 0.902 37 H 0.086 0.914 38 H 0.098 0.902 39 H 0.169 0.831 40 H 0.135 0.865 41 H 0.229 0.771 42 H -0.175 1.175 43 H -0.177 1.177 Dipole moment (debyes) X Y Z Total from point charges -6.075 -0.171 -2.831 6.704 hybrid contribution -0.783 0.915 1.068 1.610 sum -6.858 0.745 -1.764 7.120 Atomic orbital electron populations 1.22575 0.76237 1.06069 1.04290 1.43492 1.07026 1.04865 1.54407 1.21926 0.90120 0.91815 1.04726 1.20286 0.91490 0.93903 1.18074 1.17400 0.88094 0.81227 0.75157 1.90795 1.25805 1.75131 1.49969 1.45854 1.09400 1.05784 1.76988 1.21013 0.88775 0.89729 0.96585 0.88740 1.21777 0.97702 0.94034 1.02567 1.21538 0.98229 1.01192 0.93827 1.22666 0.85173 0.89669 0.99728 0.89891 1.88363 1.49412 1.56079 1.35185 1.19577 0.74725 0.77114 0.78382 1.93266 1.95864 1.71208 1.55306 1.93286 1.49768 1.73354 1.95908 1.93261 1.53254 1.73756 1.95566 1.22171 0.99415 0.94083 1.02651 1.21886 0.97070 1.00529 0.97003 1.21733 0.94955 0.93282 1.06049 1.20750 0.90577 0.89098 1.12492 1.24844 0.93372 0.94916 1.02172 1.86452 1.30046 1.89069 1.29225 0.94082 0.76813 0.77664 0.89892 0.90858 0.89965 0.86770 0.81267 0.76930 0.89753 0.90828 0.89715 0.89841 0.89835 0.90163 0.91414 0.90176 0.83065 0.86490 0.77100 1.17492 1.17673 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 -0.19 10.71 59.85 0.64 0.45 16 2 N -0.42 0.57 3.09 -119.90 -0.37 0.20 16 3 C 0.05 -0.07 10.83 -16.84 -0.18 -0.25 16 4 C -0.23 -0.33 6.29 -103.35 -0.65 -0.98 16 5 C 0.59 1.58 7.77 -12.59 -0.10 1.48 16 6 O -0.54 -3.69 16.63 5.25 0.09 -3.60 16 7 N -0.73 0.75 5.07 -54.93 -0.28 0.47 16 8 C 0.14 -0.15 2.45 -67.93 -0.17 -0.32 16 9 H 0.09 0.09 7.58 -51.93 -0.39 -0.30 16 10 C -0.12 0.42 5.39 -26.74 -0.14 0.27 16 11 C -0.11 0.26 5.57 -26.73 -0.15 0.11 16 12 C 0.08 -0.08 2.40 -26.73 -0.06 -0.15 16 13 H 0.08 -0.15 7.20 -51.93 -0.37 -0.52 16 14 O -0.37 -0.38 10.23 -35.23 -0.36 -0.74 16 15 C 0.59 0.77 3.71 101.05 0.38 1.15 16 16 F -0.17 -0.26 15.44 2.25 0.03 -0.22 16 17 F -0.14 -0.32 17.53 2.25 0.04 -0.28 16 18 F -0.18 -0.21 16.61 2.25 0.04 -0.17 16 19 C -0.14 0.08 5.39 -26.73 -0.14 -0.07 16 20 C -0.13 0.08 5.50 -26.73 -0.15 -0.07 16 21 C -0.14 -0.26 9.49 -37.50 -0.36 -0.62 16 22 C -0.02 0.00 6.14 -81.87 -0.50 -0.50 16 23 C -0.04 0.06 2.98 36.01 0.11 0.16 16 24 O -0.54 1.23 9.95 -35.23 -0.35 0.88 16 25 Si 0.72 -1.02 31.29 -169.99 -5.32 -6.34 16 26 H 0.07 -0.26 8.14 -51.93 -0.42 -0.68 16 27 H 0.08 -0.46 8.13 -51.93 -0.42 -0.89 16 28 H 0.11 -0.47 4.93 -51.93 -0.26 -0.73 16 29 H 0.17 -0.85 7.45 -52.49 -0.39 -1.24 16 30 H 0.40 -1.57 7.55 -40.82 -0.31 -1.88 16 31 H 0.08 -0.33 8.14 -51.93 -0.42 -0.75 16 32 H 0.07 -0.33 8.14 -51.93 -0.42 -0.75 16 33 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 34 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 35 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 36 H 0.08 0.00 6.50 -51.93 -0.34 -0.34 16 37 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 38 H 0.08 0.13 8.14 -51.93 -0.42 -0.30 16 39 H 0.15 0.38 6.67 -52.49 -0.35 0.03 16 40 H 0.12 -0.09 7.96 -51.93 -0.41 -0.50 16 41 H 0.38 -2.21 8.38 45.56 0.38 -1.82 16 42 H -0.25 -0.37 6.77 56.52 0.38 0.01 16 43 H -0.25 -0.33 7.11 56.52 0.40 0.07 16 LS Contribution 361.86 15.07 5.45 5.45 Total: 0.00 -8.49 361.86 -7.97 -16.46 By element: Atomic # 1 Polarization: -7.32 SS G_CDS: -5.46 Total: -12.78 kcal Atomic # 6 Polarization: 2.16 SS G_CDS: -1.48 Total: 0.68 kcal Atomic # 7 Polarization: 1.32 SS G_CDS: -0.65 Total: 0.67 kcal Atomic # 8 Polarization: -2.83 SS G_CDS: -0.62 Total: -3.46 kcal Atomic # 9 Polarization: -0.78 SS G_CDS: 0.11 Total: -0.67 kcal Atomic # 14 Polarization: -1.02 SS G_CDS: -5.32 Total: -6.34 kcal Total LS contribution 5.45 Total: 5.45 kcal Total: -8.49 -7.97 -16.46 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17849236_13287730.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -210.628 kcal (2) G-P(sol) polarization free energy of solvation -8.487 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -219.115 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.970 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.457 kcal (6) G-S(sol) free energy of system = (1) + (5) -227.085 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds