Wall clock time and date at job start Sun Mar 7 2021 15:02:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 C 1.34665 * 124.85057 * 2 1 4 4 C 1.36761 * 108.39552 * 179.77653 * 3 2 1 5 5 C 1.47269 * 126.94357 * 180.24859 * 4 3 2 6 6 O 1.21628 * 120.00403 * 180.14629 * 5 4 3 7 7 N 1.34775 * 119.99757 * 0.14762 * 5 4 3 8 8 C 1.46501 * 120.00384 * 180.02562 * 7 5 4 9 9 H 1.09006 * 109.46760 * 34.99317 * 8 7 5 10 10 C 1.52994 * 109.47678 * 154.99634 * 8 7 5 11 11 C 1.52998 * 109.47362 * 180.02562 * 10 8 7 12 12 C 1.53001 * 109.46784 * 299.99699 * 11 10 8 13 13 H 1.08998 * 109.47452 * 300.00052 * 12 11 10 14 14 O 1.42898 * 109.46966 * 179.97438 * 12 11 10 15 15 C 1.42901 * 114.00140 * 150.00095 * 14 12 11 16 16 F 1.39902 * 109.46869 * 60.00087 * 15 14 12 17 17 F 1.39901 * 109.47442 * 180.02562 * 15 14 12 18 18 F 1.39906 * 109.47201 * 300.00669 * 15 14 12 19 19 C 1.53001 * 109.46898 * 60.00308 * 12 11 10 20 20 C 1.52998 * 109.47151 * 299.99466 * 19 12 11 21 21 C 1.46686 * 106.12033 * 0.36955 * 4 3 2 22 22 C 1.34485 * 106.32840 * 359.63139 * 21 4 3 23 23 C 1.50700 * 125.57287 * 180.20547 * 22 21 4 24 24 O 1.42902 * 109.47467 * 210.02691 * 23 22 21 25 25 Si 1.86302 * 109.47015 * 330.02508 * 23 22 21 26 26 H 1.08995 * 109.47260 * 269.97748 * 1 2 3 27 27 H 1.08999 * 109.46909 * 29.97657 * 1 2 3 28 28 H 1.08993 * 109.46986 * 149.97597 * 1 2 3 29 29 H 1.07998 * 125.79941 * 0.05326 * 3 2 1 30 30 H 0.97007 * 119.99926 * 359.97438 * 7 5 4 31 31 H 1.09004 * 109.47166 * 300.00341 * 10 8 7 32 32 H 1.09007 * 109.46951 * 59.99576 * 10 8 7 33 33 H 1.08998 * 109.47169 * 59.99925 * 11 10 8 34 34 H 1.09001 * 109.46814 * 180.02562 * 11 10 8 35 35 H 1.08998 * 109.47278 * 59.99637 * 19 12 11 36 36 H 1.09004 * 109.47139 * 179.97438 * 19 12 11 37 37 H 1.08998 * 109.47169 * 300.00238 * 20 19 12 38 38 H 1.09007 * 109.47242 * 179.97438 * 20 19 12 39 39 H 1.08002 * 126.83986 * 179.89990 * 21 4 3 40 40 H 1.09003 * 109.47560 * 90.02564 * 23 22 21 41 41 H 0.96701 * 113.99610 * 59.99825 * 24 23 22 42 42 H 1.48506 * 109.99894 * 58.68116 * 25 23 22 43 43 H 1.48501 * 110.00093 * 179.97438 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2345 1.1051 0.0000 4 6 3.5461 0.7177 0.0051 5 6 4.7284 1.5958 0.0120 6 8 5.8447 1.1129 0.0133 7 7 4.5734 2.9346 0.0169 8 6 5.7494 3.8083 0.0232 9 1 6.5445 3.3514 -0.5660 10 6 5.3808 5.1642 -0.5820 11 6 6.6092 6.0763 -0.5759 12 6 7.0904 6.2739 0.8629 13 1 6.2956 6.7309 1.4524 14 8 8.2380 7.1253 0.8686 15 6 8.3735 7.9104 2.0549 16 9 8.4816 7.0646 3.1640 17 9 9.5213 8.7047 1.9600 18 9 7.2499 8.7310 2.2020 19 6 7.4591 4.9179 1.4681 20 6 6.2307 4.0058 1.4621 21 6 3.5376 -0.7491 -0.0008 22 6 2.2448 -1.1197 -0.0004 23 6 1.7398 -2.5395 -0.0010 24 8 0.4809 -2.5972 -0.6747 25 14 2.9650 -3.6340 -0.8797 26 1 -0.3633 -0.0004 1.0276 27 1 -0.3633 0.8902 -0.5135 28 1 -0.3633 -0.8897 -0.5142 29 1 1.8767 2.1241 0.0008 30 1 3.6830 3.3198 0.0155 31 1 5.0382 5.0235 -1.6072 32 1 4.5856 5.6210 0.0073 33 1 7.4039 5.6193 -1.1654 34 1 6.3463 7.0425 -1.0067 35 1 8.2539 4.4609 0.8786 36 1 7.8024 5.0588 2.4931 37 1 5.4359 4.4628 2.0515 38 1 6.4935 3.0396 1.8928 39 1 4.3982 -1.4017 -0.0006 40 1 1.6181 -2.8824 1.0265 41 1 0.5143 -2.3058 -1.5962 42 1 4.2870 -3.5583 -0.2075 43 1 2.4789 -5.0372 -0.8866 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17849236_13287730.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 15:02:11 Heat of formation + Delta-G solvation = -226.742298 kcal Electronic energy + Delta-G solvation = -31081.575204 eV Core-core repulsion = 26099.768981 eV Total energy + Delta-G solvation = -4981.806223 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 349.133 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -51.26016 -49.01525 -48.94248 -42.46323 -40.99233 -39.87195 -37.91614 -37.73397 -34.83901 -33.70712 -31.96418 -31.63186 -29.87089 -27.46850 -26.50732 -26.09129 -24.23117 -23.88801 -22.81958 -21.48920 -20.96053 -20.51575 -20.37760 -19.97000 -19.70776 -18.96216 -17.53980 -17.15757 -17.07185 -16.74777 -16.52342 -16.19388 -15.90398 -15.73691 -15.63939 -15.50364 -15.42495 -15.37806 -15.29089 -15.13538 -15.07429 -14.98104 -14.69770 -14.58797 -14.27906 -14.09073 -13.88296 -13.44246 -13.32328 -13.24394 -13.09092 -12.88062 -12.74091 -12.24430 -12.16172 -12.09550 -12.06645 -11.58225 -11.21914 -10.98258 -10.69455 -10.11576 -9.56484 -9.21245 -5.00223 0.75559 0.80799 1.02554 1.38670 1.62931 1.89196 1.99160 2.07225 2.28432 2.56082 2.94240 3.04031 3.29600 3.49249 3.52861 3.54952 3.83377 3.86347 3.91395 3.97228 4.00508 4.10540 4.25578 4.33443 4.38062 4.39889 4.43812 4.52428 4.52743 4.65330 4.76995 4.82685 4.94302 4.96550 4.99992 5.04320 5.07283 5.13998 5.22315 5.38154 5.52840 5.64076 5.96963 6.25772 6.59241 6.67433 7.36884 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.045 3.955 2 N -0.421 5.421 3 C 0.077 3.923 4 C -0.261 4.261 5 C 0.588 3.412 6 O -0.597 6.597 7 N -0.710 5.710 8 C 0.143 3.857 9 H 0.067 0.933 10 C -0.111 4.111 11 C -0.108 4.108 12 C 0.080 3.920 13 H 0.098 0.902 14 O -0.375 6.375 15 C 0.596 3.404 16 F -0.177 7.177 17 F -0.149 7.149 18 F -0.174 7.174 19 C -0.142 4.142 20 C -0.119 4.119 21 C -0.169 4.169 22 C -0.015 4.015 23 C -0.033 4.033 24 O -0.544 6.544 25 Si 0.786 3.214 26 H 0.073 0.927 27 H 0.109 0.891 28 H 0.118 0.882 29 H 0.213 0.787 30 H 0.415 0.585 31 H 0.097 0.903 32 H 0.097 0.903 33 H 0.075 0.925 34 H 0.096 0.904 35 H 0.069 0.931 36 H 0.073 0.927 37 H 0.085 0.915 38 H 0.050 0.950 39 H 0.129 0.871 40 H 0.114 0.886 41 H 0.398 0.602 42 H -0.301 1.301 43 H -0.285 1.285 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.019 2.940 -3.929 11.156 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.094 4.094 2 N -0.095 5.095 3 C -0.060 4.060 4 C -0.271 4.271 5 C 0.378 3.622 6 O -0.479 6.479 7 N -0.361 5.361 8 C 0.039 3.961 9 H 0.085 0.915 10 C -0.149 4.149 11 C -0.146 4.146 12 C 0.025 3.975 13 H 0.116 0.884 14 O -0.299 6.299 15 C 0.504 3.496 16 F -0.159 7.159 17 F -0.131 7.131 18 F -0.156 7.156 19 C -0.180 4.180 20 C -0.158 4.158 21 C -0.193 4.193 22 C -0.125 4.125 23 C -0.144 4.144 24 O -0.352 6.352 25 Si 0.692 3.308 26 H 0.092 0.908 27 H 0.127 0.873 28 H 0.136 0.864 29 H 0.229 0.771 30 H 0.252 0.748 31 H 0.115 0.885 32 H 0.116 0.884 33 H 0.093 0.907 34 H 0.114 0.886 35 H 0.088 0.912 36 H 0.092 0.908 37 H 0.103 0.897 38 H 0.069 0.931 39 H 0.147 0.853 40 H 0.131 0.869 41 H 0.249 0.751 42 H -0.228 1.228 43 H -0.212 1.212 Dipole moment (debyes) X Y Z Total from point charges -9.176 1.698 -3.427 9.942 hybrid contribution 0.164 0.307 1.266 1.313 sum -9.012 2.005 -2.162 9.482 Atomic orbital electron populations 1.22796 0.74213 1.07667 1.04770 1.43733 1.08149 1.04332 1.53258 1.22451 0.88746 0.93380 1.01440 1.20286 0.92496 0.93495 1.20837 1.17706 0.87712 0.82350 0.74416 1.90761 1.27924 1.76271 1.52919 1.45661 1.10422 1.04588 1.75423 1.20998 0.88234 0.90888 0.96021 0.91479 1.21726 0.97757 0.91915 1.03479 1.21564 0.98396 1.01951 0.92669 1.22853 0.84942 0.88820 1.00929 0.88390 1.88376 1.50390 1.56237 1.34886 1.19560 0.74548 0.77067 0.78449 1.93262 1.95874 1.71273 1.55493 1.93266 1.50260 1.73618 1.95958 1.93261 1.53040 1.73713 1.95575 1.22111 0.99134 0.94680 1.02118 1.21797 0.97495 0.99097 0.97436 1.21725 0.95414 0.94011 1.08183 1.20721 0.90064 0.90019 1.11706 1.24657 0.93642 0.94151 1.01994 1.86429 1.28987 1.89137 1.30673 0.93246 0.73462 0.75345 0.88756 0.90845 0.87255 0.86430 0.77066 0.74754 0.88500 0.88436 0.90651 0.88562 0.91176 0.90801 0.89665 0.93076 0.85295 0.86882 0.75098 1.22804 1.21196 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 -0.47 10.71 127.77 1.37 0.89 16 2 N -0.42 1.87 3.09 -533.26 -1.65 0.23 16 3 C 0.08 -0.38 10.83 83.91 0.91 0.53 16 4 C -0.26 -0.94 6.29 -19.04 -0.12 -1.06 16 5 C 0.59 4.07 7.77 86.62 0.67 4.74 16 6 O -0.60 -10.34 16.63 -4.12 -0.07 -10.41 16 7 N -0.71 1.62 5.07 -445.94 -2.26 -0.64 16 8 C 0.14 -0.25 2.45 44.99 0.11 -0.14 16 9 H 0.07 0.29 7.58 -2.38 -0.02 0.27 16 10 C -0.11 0.94 5.39 30.59 0.16 1.11 16 11 C -0.11 0.61 5.57 30.59 0.17 0.78 16 12 C 0.08 -0.19 2.40 30.59 0.07 -0.11 16 13 H 0.10 -0.50 7.20 -2.39 -0.02 -0.52 16 14 O -0.37 -0.82 10.23 -148.98 -1.52 -2.34 16 15 C 0.60 1.61 3.71 113.37 0.42 2.03 16 16 F -0.18 -0.59 15.44 44.97 0.69 0.10 16 17 F -0.15 -0.73 17.53 44.97 0.79 0.05 16 18 F -0.17 -0.30 16.61 44.97 0.75 0.45 16 19 C -0.14 -0.01 5.39 30.59 0.16 0.16 16 20 C -0.12 0.05 5.50 30.59 0.17 0.21 16 21 C -0.17 -0.99 9.49 23.62 0.22 -0.76 16 22 C -0.02 0.00 6.14 40.98 0.25 0.25 16 23 C -0.03 0.08 2.98 71.24 0.21 0.29 16 24 O -0.54 3.17 9.95 -148.98 -1.48 1.69 16 25 Si 0.79 -0.86 31.29 68.60 2.15 1.29 16 26 H 0.07 -0.71 8.14 -2.39 -0.02 -0.73 16 27 H 0.11 -1.69 8.13 -2.39 -0.02 -1.71 16 28 H 0.12 -1.29 4.93 -2.39 -0.01 -1.30 16 29 H 0.21 -3.03 7.45 -2.91 -0.02 -3.05 16 30 H 0.42 -4.21 7.55 -92.70 -0.70 -4.91 16 31 H 0.10 -0.98 8.14 -2.39 -0.02 -1.00 16 32 H 0.10 -1.22 8.14 -2.38 -0.02 -1.24 16 33 H 0.07 -0.26 8.14 -2.39 -0.02 -0.28 16 34 H 0.10 -0.73 8.14 -2.39 -0.02 -0.75 16 35 H 0.07 0.18 8.14 -2.39 -0.02 0.16 16 36 H 0.07 0.09 6.50 -2.39 -0.02 0.08 16 37 H 0.08 -0.34 8.14 -2.39 -0.02 -0.36 16 38 H 0.05 0.30 8.14 -2.38 -0.02 0.28 16 39 H 0.13 1.21 6.67 -2.91 -0.02 1.19 16 40 H 0.11 -0.13 7.96 -2.39 -0.02 -0.15 16 41 H 0.40 -5.34 8.38 -74.06 -0.62 -5.96 16 42 H -0.30 -2.12 6.77 99.48 0.67 -1.45 16 43 H -0.28 -1.24 7.11 99.48 0.71 -0.53 16 Total: 0.00 -24.57 361.86 1.95 -22.62 By element: Atomic # 1 Polarization: -21.72 SS G_CDS: -0.24 Total: -21.96 kcal Atomic # 6 Polarization: 4.12 SS G_CDS: 4.79 Total: 8.92 kcal Atomic # 7 Polarization: 3.50 SS G_CDS: -3.91 Total: -0.41 kcal Atomic # 8 Polarization: -7.99 SS G_CDS: -3.08 Total: -11.06 kcal Atomic # 9 Polarization: -1.63 SS G_CDS: 2.23 Total: 0.60 kcal Atomic # 14 Polarization: -0.86 SS G_CDS: 2.15 Total: 1.29 kcal Total: -24.57 1.95 -22.62 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17849236_13287730.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -204.117 kcal (2) G-P(sol) polarization free energy of solvation -24.574 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -228.692 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.950 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.625 kcal (6) G-S(sol) free energy of system = (1) + (5) -226.742 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds