Wall clock time and date at job start Sun Mar 7 2021 15:02:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.36417 * 125.80188 * 2 1 4 4 C 1.47381 * 127.19390 * 0.02562 * 3 2 1 5 5 O 1.21613 * 119.99816 * 359.70203 * 4 3 2 6 6 N 1.34777 * 120.00222 * 179.70704 * 4 3 2 7 7 C 1.46498 * 119.99828 * 180.27565 * 6 4 3 8 8 H 1.08995 * 109.47013 * 324.72129 * 7 6 4 9 9 C 1.52999 * 109.47257 * 84.72116 * 7 6 4 10 10 C 1.53003 * 109.47010 * 179.97438 * 9 7 6 11 11 C 1.52997 * 109.47127 * 300.00125 * 10 9 7 12 12 H 1.08995 * 109.47275 * 299.99879 * 11 10 9 13 13 O 1.42907 * 109.47171 * 180.02562 * 11 10 9 14 14 C 1.42899 * 114.00150 * 89.99789 * 13 11 10 15 15 F 1.39900 * 109.46888 * 59.99843 * 14 13 11 16 16 F 1.39894 * 109.47137 * 180.02562 * 14 13 11 17 17 F 1.39901 * 109.46900 * 300.00100 * 14 13 11 18 18 C 1.52999 * 109.47278 * 60.00039 * 11 10 9 19 19 C 1.52994 * 109.47024 * 299.99839 * 18 11 10 20 20 C 1.47023 * 105.61634 * 179.74158 * 3 2 1 21 21 C 1.34177 * 105.95257 * 0.26410 * 20 3 2 22 22 C 1.50704 * 125.43526 * 179.97438 * 21 20 3 23 23 O 1.42900 * 109.46772 * 65.00845 * 22 21 20 24 24 Si 1.86303 * 109.46735 * 184.99952 * 22 21 20 25 25 O 1.33654 * 125.80318 * 180.20159 * 2 1 3 26 26 H 1.08988 * 109.47144 * 89.98863 * 1 2 3 27 27 H 1.08999 * 109.46886 * 210.00034 * 1 2 3 28 28 H 1.09000 * 109.46657 * 329.99123 * 1 2 3 29 29 H 0.97001 * 119.99727 * 359.97438 * 6 4 3 30 30 H 1.08996 * 109.47245 * 299.99926 * 9 7 6 31 31 H 1.08995 * 109.47098 * 60.00065 * 9 7 6 32 32 H 1.08996 * 109.47077 * 179.97438 * 10 9 7 33 33 H 1.09003 * 109.47062 * 60.00488 * 10 9 7 34 34 H 1.08996 * 109.47245 * 179.97438 * 18 11 10 35 35 H 1.09003 * 109.46809 * 59.99699 * 18 11 10 36 36 H 1.08994 * 109.47599 * 300.00048 * 19 18 11 37 37 H 1.08998 * 109.47530 * 179.97438 * 19 18 11 38 38 H 1.08004 * 127.02181 * 180.24688 * 20 3 2 39 39 H 1.08995 * 109.47478 * 305.00556 * 22 21 20 40 40 H 0.96701 * 114.00536 * 59.99231 * 23 22 21 41 41 H 1.48501 * 109.99933 * 58.68674 * 24 22 21 42 42 H 1.48503 * 109.99817 * 180.02562 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3050 1.1064 0.0000 4 6 1.8740 2.5158 0.0005 5 8 0.6890 2.7892 -0.0045 6 7 2.7931 3.5016 0.0064 7 6 2.3645 4.9025 0.0130 8 1 1.4567 5.0075 -0.5809 9 6 2.0870 5.3441 1.4514 10 6 1.6400 6.8074 1.4583 11 6 2.7449 7.6809 0.8607 12 1 3.6526 7.5755 1.4547 13 8 2.3277 9.0477 0.8677 14 6 2.6791 9.7566 2.0577 15 9 4.0695 9.7486 2.2118 16 9 2.2273 11.0773 1.9643 17 9 2.0838 9.1377 3.1621 18 6 3.0224 7.2393 -0.5776 19 6 3.4694 5.7761 -0.5845 20 6 3.6849 0.5991 0.0064 21 6 3.5859 -0.7390 0.0036 22 6 4.7460 -1.7010 0.0075 23 8 5.4701 -1.5690 1.2324 24 14 4.1077 -3.4440 -0.1516 25 8 2.2889 -1.0840 -0.0038 26 1 -0.3633 0.0002 -1.0276 27 1 -0.3633 -0.8900 0.5138 28 1 -0.3632 0.8899 0.5140 29 1 3.7382 3.2834 0.0107 30 1 1.3002 4.7215 1.8772 31 1 2.9949 5.2391 2.0453 32 1 1.4419 7.1219 2.4829 33 1 0.7322 6.9128 0.8643 34 1 3.8092 7.8619 -1.0035 35 1 2.1146 7.3447 -1.1716 36 1 4.3771 5.6706 0.0095 37 1 3.6667 5.4612 -1.6092 38 1 4.5928 1.1840 0.0119 39 1 5.4060 -1.4778 -0.8306 40 1 4.9437 -1.7533 2.0224 41 1 3.3258 -3.5860 -1.4061 42 1 5.2420 -4.4025 -0.1484 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17849236_13308374.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 15:02:27 Heat of formation + Delta-G solvation = -268.063568 kcal Electronic energy + Delta-G solvation = -31349.916317 eV Core-core repulsion = 26268.599607 eV Total energy + Delta-G solvation = -5081.316710 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.122 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -51.17659 -48.91257 -48.86912 -43.77504 -41.16147 -39.97744 -38.14690 -37.91683 -34.96471 -34.05777 -33.14091 -32.12984 -30.34690 -29.24986 -26.46413 -25.81317 -24.51644 -24.09622 -23.32117 -21.98495 -21.58516 -20.67079 -20.31824 -19.89704 -19.65976 -18.96950 -17.97681 -17.66973 -17.55128 -16.82237 -16.65766 -16.23221 -16.00689 -15.90789 -15.82589 -15.63390 -15.51503 -15.31351 -15.27880 -15.06995 -15.00902 -14.77495 -14.61005 -14.44361 -14.27022 -14.16883 -14.05877 -13.91044 -13.88676 -13.49050 -13.11614 -12.95222 -12.86177 -12.80314 -12.40756 -12.22078 -12.18709 -11.74719 -11.31571 -11.01668 -10.91286 -10.67467 -10.14998 -9.60036 -5.11103 0.27125 0.80345 0.83364 1.06386 1.37617 1.69752 1.85812 1.99418 2.13701 2.32140 2.99139 3.08570 3.11195 3.32700 3.35353 3.40144 3.63867 3.71344 3.73029 3.77178 3.87998 3.89905 4.08504 4.12091 4.17995 4.19580 4.31759 4.39256 4.47877 4.51899 4.59845 4.64328 4.75595 4.76021 4.86654 4.92090 5.00233 5.04880 5.09152 5.17949 5.25887 5.41166 5.88084 6.29345 6.44198 7.19307 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.087 4.087 2 C 0.096 3.904 3 C -0.255 4.255 4 C 0.595 3.405 5 O -0.537 6.537 6 N -0.721 5.721 7 C 0.143 3.857 8 H 0.095 0.905 9 C -0.126 4.126 10 C -0.145 4.145 11 C 0.083 3.917 12 H 0.084 0.916 13 O -0.367 6.367 14 C 0.594 3.406 15 F -0.176 7.176 16 F -0.141 7.141 17 F -0.174 7.174 18 C -0.110 4.110 19 C -0.124 4.124 20 C -0.149 4.149 21 C -0.056 4.056 22 C -0.027 4.027 23 O -0.531 6.531 24 Si 0.703 3.297 25 O -0.168 6.168 26 H 0.092 0.908 27 H 0.082 0.918 28 H 0.111 0.889 29 H 0.401 0.599 30 H 0.080 0.920 31 H 0.068 0.932 32 H 0.081 0.919 33 H 0.083 0.917 34 H 0.084 0.916 35 H 0.084 0.916 36 H 0.074 0.926 37 H 0.084 0.916 38 H 0.158 0.842 39 H 0.133 0.867 40 H 0.384 0.616 41 H -0.253 1.253 42 H -0.246 1.246 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.562 -3.049 0.578 3.475 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.143 4.143 2 C 0.043 3.957 3 C -0.259 4.259 4 C 0.383 3.617 5 O -0.416 6.416 6 N -0.372 5.372 7 C 0.039 3.961 8 H 0.114 0.886 9 C -0.165 4.165 10 C -0.183 4.183 11 C 0.027 3.973 12 H 0.102 0.898 13 O -0.290 6.290 14 C 0.502 3.498 15 F -0.158 7.158 16 F -0.123 7.123 17 F -0.156 7.156 18 C -0.148 4.148 19 C -0.162 4.162 20 C -0.168 4.168 21 C -0.104 4.104 22 C -0.138 4.138 23 O -0.336 6.336 24 Si 0.603 3.397 25 O -0.065 6.065 26 H 0.110 0.890 27 H 0.101 0.899 28 H 0.129 0.871 29 H 0.236 0.764 30 H 0.098 0.902 31 H 0.087 0.913 32 H 0.099 0.901 33 H 0.102 0.898 34 H 0.102 0.898 35 H 0.103 0.897 36 H 0.093 0.907 37 H 0.102 0.898 38 H 0.175 0.825 39 H 0.150 0.850 40 H 0.232 0.768 41 H -0.177 1.177 42 H -0.171 1.171 Dipole moment (debyes) X Y Z Total from point charges 1.031 -3.641 -0.443 3.810 hybrid contribution 0.974 0.831 0.094 1.283 sum 2.005 -2.810 -0.349 3.469 Atomic orbital electron populations 1.20705 0.83297 1.05502 1.04782 1.22932 0.94087 0.82850 0.95840 1.21115 0.93225 0.93790 1.17758 1.17162 0.85410 0.83689 0.75418 1.90784 1.16470 1.83967 1.50342 1.45805 1.09799 1.05648 1.75960 1.21066 0.98750 0.79511 0.96821 0.88649 1.21884 1.02616 0.95172 0.96799 1.22166 0.98891 0.94452 1.02769 1.22658 0.98067 0.76814 0.99714 0.89843 1.88362 1.79167 1.26607 1.34909 1.19570 0.74366 0.77466 0.78380 1.93262 1.30752 1.96283 1.95491 1.93286 1.89240 1.33855 1.95911 1.93265 1.83953 1.82779 1.55651 1.21531 1.03724 0.95626 0.93883 1.21780 0.98276 0.93462 1.02653 1.22575 0.96450 0.93518 1.04256 1.22614 0.82939 0.95647 1.09217 1.24419 0.90700 1.07714 0.90963 1.86560 1.39028 1.93147 1.14898 0.94168 0.82726 0.74510 0.88314 1.83676 1.16356 1.35044 1.71408 0.89000 0.89875 0.87057 0.76446 0.90159 0.91292 0.90064 0.89830 0.89762 0.89726 0.90693 0.89751 0.82486 0.84969 0.76770 1.17746 1.17057 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 0.06 9.89 36.01 0.36 0.42 16 2 C 0.10 0.09 7.37 -34.96 -0.26 -0.16 16 3 C -0.25 -0.30 6.31 -103.27 -0.65 -0.95 16 4 C 0.59 1.05 7.77 -12.54 -0.10 0.95 16 5 O -0.54 -2.39 14.51 5.27 0.08 -2.31 16 6 N -0.72 0.77 5.07 -54.90 -0.28 0.49 16 7 C 0.14 -0.21 2.45 -67.93 -0.17 -0.37 16 8 H 0.10 0.03 7.58 -51.93 -0.39 -0.37 16 9 C -0.13 0.16 5.49 -26.73 -0.15 0.01 16 10 C -0.14 0.15 5.39 -26.73 -0.14 0.01 16 11 C 0.08 -0.10 2.40 -26.73 -0.06 -0.17 16 12 H 0.08 -0.16 7.20 -51.93 -0.37 -0.54 16 13 O -0.37 -0.29 10.24 -35.23 -0.36 -0.65 16 14 C 0.59 0.65 3.71 101.05 0.37 1.02 16 15 F -0.18 -0.19 16.61 2.25 0.04 -0.15 16 16 F -0.14 -0.29 17.53 2.25 0.04 -0.25 16 17 F -0.17 -0.20 15.44 2.25 0.03 -0.17 16 18 C -0.11 0.27 5.57 -26.73 -0.15 0.12 16 19 C -0.12 0.41 5.39 -26.73 -0.14 0.27 16 20 C -0.15 0.04 10.48 -37.45 -0.39 -0.35 16 21 C -0.06 0.01 6.18 -35.74 -0.22 -0.21 16 22 C -0.03 0.04 2.97 36.01 0.11 0.15 16 23 O -0.53 0.78 12.88 -35.23 -0.45 0.33 16 24 Si 0.70 -1.16 32.09 -169.99 -5.46 -6.62 16 25 O -0.17 -0.10 8.90 7.65 0.07 -0.03 16 26 H 0.09 -0.11 8.14 -51.94 -0.42 -0.53 16 27 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 28 H 0.11 0.05 6.49 -51.93 -0.34 -0.29 16 29 H 0.40 -1.27 7.77 -40.82 -0.32 -1.58 16 30 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 31 H 0.07 -0.13 8.14 -51.93 -0.42 -0.56 16 32 H 0.08 -0.05 6.50 -51.93 -0.34 -0.38 16 33 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 34 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 35 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 36 H 0.07 -0.32 8.14 -51.93 -0.42 -0.74 16 37 H 0.08 -0.31 8.14 -51.93 -0.42 -0.73 16 38 H 0.16 -0.36 7.74 -52.48 -0.41 -0.77 16 39 H 0.13 -0.27 7.96 -51.93 -0.41 -0.68 16 40 H 0.38 -1.95 8.70 45.56 0.40 -1.55 16 41 H -0.25 -0.36 7.11 56.52 0.40 0.04 16 42 H -0.25 -0.21 7.11 56.52 0.40 0.19 16 LS Contribution 362.11 15.07 5.46 5.46 Total: 0.00 -6.78 362.11 -7.62 -14.39 By element: Atomic # 1 Polarization: -6.05 SS G_CDS: -5.18 Total: -11.24 kcal Atomic # 6 Polarization: 2.34 SS G_CDS: -1.60 Total: 0.74 kcal Atomic # 7 Polarization: 0.77 SS G_CDS: -0.28 Total: 0.49 kcal Atomic # 8 Polarization: -1.99 SS G_CDS: -0.67 Total: -2.66 kcal Atomic # 9 Polarization: -0.68 SS G_CDS: 0.11 Total: -0.57 kcal Atomic # 14 Polarization: -1.16 SS G_CDS: -5.46 Total: -6.62 kcal Total LS contribution 5.46 Total: 5.46 kcal Total: -6.78 -7.62 -14.39 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17849236_13308374.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -253.670 kcal (2) G-P(sol) polarization free energy of solvation -6.776 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -260.446 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.618 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.394 kcal (6) G-S(sol) free energy of system = (1) + (5) -268.064 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds