Wall clock time and date at job start Sun Mar 7 2021 15:02:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.36417 * 125.80188 * 2 1 4 4 C 1.47381 * 127.19390 * 0.02562 * 3 2 1 5 5 O 1.21613 * 119.99816 * 359.70203 * 4 3 2 6 6 N 1.34777 * 120.00222 * 179.70704 * 4 3 2 7 7 C 1.46498 * 119.99828 * 180.27565 * 6 4 3 8 8 H 1.08995 * 109.47013 * 324.72129 * 7 6 4 9 9 C 1.52999 * 109.47257 * 84.72116 * 7 6 4 10 10 C 1.53003 * 109.47010 * 179.97438 * 9 7 6 11 11 C 1.52997 * 109.47127 * 300.00125 * 10 9 7 12 12 H 1.08995 * 109.47275 * 299.99879 * 11 10 9 13 13 O 1.42907 * 109.47171 * 180.02562 * 11 10 9 14 14 C 1.42899 * 114.00150 * 89.99789 * 13 11 10 15 15 F 1.39900 * 109.46888 * 59.99843 * 14 13 11 16 16 F 1.39894 * 109.47137 * 180.02562 * 14 13 11 17 17 F 1.39901 * 109.46900 * 300.00100 * 14 13 11 18 18 C 1.52999 * 109.47278 * 60.00039 * 11 10 9 19 19 C 1.52994 * 109.47024 * 299.99839 * 18 11 10 20 20 C 1.47023 * 105.61634 * 179.74158 * 3 2 1 21 21 C 1.34177 * 105.95257 * 0.26410 * 20 3 2 22 22 C 1.50704 * 125.43526 * 179.97438 * 21 20 3 23 23 O 1.42900 * 109.46772 * 65.00845 * 22 21 20 24 24 Si 1.86303 * 109.46735 * 184.99952 * 22 21 20 25 25 O 1.33654 * 125.80318 * 180.20159 * 2 1 3 26 26 H 1.08988 * 109.47144 * 89.98863 * 1 2 3 27 27 H 1.08999 * 109.46886 * 210.00034 * 1 2 3 28 28 H 1.09000 * 109.46657 * 329.99123 * 1 2 3 29 29 H 0.97001 * 119.99727 * 359.97438 * 6 4 3 30 30 H 1.08996 * 109.47245 * 299.99926 * 9 7 6 31 31 H 1.08995 * 109.47098 * 60.00065 * 9 7 6 32 32 H 1.08996 * 109.47077 * 179.97438 * 10 9 7 33 33 H 1.09003 * 109.47062 * 60.00488 * 10 9 7 34 34 H 1.08996 * 109.47245 * 179.97438 * 18 11 10 35 35 H 1.09003 * 109.46809 * 59.99699 * 18 11 10 36 36 H 1.08994 * 109.47599 * 300.00048 * 19 18 11 37 37 H 1.08998 * 109.47530 * 179.97438 * 19 18 11 38 38 H 1.08004 * 127.02181 * 180.24688 * 20 3 2 39 39 H 1.08995 * 109.47478 * 305.00556 * 22 21 20 40 40 H 0.96701 * 114.00536 * 59.99231 * 23 22 21 41 41 H 1.48501 * 109.99933 * 58.68674 * 24 22 21 42 42 H 1.48503 * 109.99817 * 180.02562 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3050 1.1064 0.0000 4 6 1.8740 2.5158 0.0005 5 8 0.6890 2.7892 -0.0045 6 7 2.7931 3.5016 0.0064 7 6 2.3645 4.9025 0.0130 8 1 1.4567 5.0075 -0.5809 9 6 2.0870 5.3441 1.4514 10 6 1.6400 6.8074 1.4583 11 6 2.7449 7.6809 0.8607 12 1 3.6526 7.5755 1.4547 13 8 2.3277 9.0477 0.8677 14 6 2.6791 9.7566 2.0577 15 9 4.0695 9.7486 2.2118 16 9 2.2273 11.0773 1.9643 17 9 2.0838 9.1377 3.1621 18 6 3.0224 7.2393 -0.5776 19 6 3.4694 5.7761 -0.5845 20 6 3.6849 0.5991 0.0064 21 6 3.5859 -0.7390 0.0036 22 6 4.7460 -1.7010 0.0075 23 8 5.4701 -1.5690 1.2324 24 14 4.1077 -3.4440 -0.1516 25 8 2.2889 -1.0840 -0.0038 26 1 -0.3633 0.0002 -1.0276 27 1 -0.3633 -0.8900 0.5138 28 1 -0.3632 0.8899 0.5140 29 1 3.7382 3.2834 0.0107 30 1 1.3002 4.7215 1.8772 31 1 2.9949 5.2391 2.0453 32 1 1.4419 7.1219 2.4829 33 1 0.7322 6.9128 0.8643 34 1 3.8092 7.8619 -1.0035 35 1 2.1146 7.3447 -1.1716 36 1 4.3771 5.6706 0.0095 37 1 3.6667 5.4612 -1.6092 38 1 4.5928 1.1840 0.0119 39 1 5.4060 -1.4778 -0.8306 40 1 4.9437 -1.7533 2.0224 41 1 3.3258 -3.5860 -1.4061 42 1 5.2420 -4.4025 -0.1484 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17849236_13308374.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 15:02:26 Heat of formation + Delta-G solvation = -265.825684 kcal Electronic energy + Delta-G solvation = -31349.819275 eV Core-core repulsion = 26268.599607 eV Total energy + Delta-G solvation = -5081.219668 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.122 amu Computer time = 1.26 seconds Orbital eigenvalues (eV) -51.26675 -49.02149 -48.94896 -43.76485 -41.14564 -40.01377 -38.03229 -37.89768 -34.99644 -34.04944 -33.09034 -31.99542 -30.29481 -29.17789 -26.50589 -25.78438 -24.49772 -23.96912 -23.27729 -21.95270 -21.53849 -20.68419 -20.32950 -19.97653 -19.70913 -18.89438 -17.93439 -17.65505 -17.49924 -16.81786 -16.63838 -16.23503 -15.97929 -15.88133 -15.77418 -15.73818 -15.50354 -15.37959 -15.32167 -15.14317 -15.08790 -14.80368 -14.61430 -14.38697 -14.26796 -14.13996 -14.01082 -13.87197 -13.82215 -13.35431 -13.01985 -12.86981 -12.77664 -12.74180 -12.26910 -12.25303 -12.12624 -11.62193 -11.25990 -11.09836 -10.92631 -10.59693 -10.15015 -9.58386 -5.00431 0.23156 0.79650 0.83603 1.17427 1.41144 1.75224 1.91000 1.97736 2.14985 2.24856 2.93456 3.03333 3.22743 3.45904 3.48482 3.50120 3.69335 3.77657 3.82532 3.87957 3.96091 4.05682 4.11684 4.22756 4.31807 4.34976 4.41040 4.49164 4.59143 4.61709 4.65694 4.73745 4.79692 4.94747 5.00973 5.03723 5.06260 5.13641 5.18708 5.22224 5.35021 5.45730 5.90141 6.48360 6.62479 7.16232 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.085 4.085 2 C 0.084 3.916 3 C -0.269 4.269 4 C 0.590 3.410 5 O -0.572 6.572 6 N -0.708 5.708 7 C 0.144 3.856 8 H 0.074 0.926 9 C -0.119 4.119 10 C -0.141 4.141 11 C 0.079 3.921 12 H 0.096 0.904 13 O -0.375 6.375 14 C 0.596 3.404 15 F -0.174 7.174 16 F -0.149 7.149 17 F -0.176 7.176 18 C -0.107 4.107 19 C -0.114 4.114 20 C -0.147 4.147 21 C -0.062 4.062 22 C -0.021 4.021 23 O -0.540 6.540 24 Si 0.773 3.227 25 O -0.172 6.172 26 H 0.095 0.905 27 H 0.101 0.899 28 H 0.098 0.902 29 H 0.414 0.586 30 H 0.059 0.941 31 H 0.082 0.918 32 H 0.075 0.925 33 H 0.073 0.927 34 H 0.093 0.907 35 H 0.077 0.923 36 H 0.093 0.907 37 H 0.093 0.907 38 H 0.179 0.821 39 H 0.140 0.860 40 H 0.400 0.600 41 H -0.296 1.296 42 H -0.280 1.280 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.037 -3.067 0.738 4.379 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.141 4.141 2 C 0.031 3.969 3 C -0.273 4.273 4 C 0.379 3.621 5 O -0.454 6.454 6 N -0.358 5.358 7 C 0.039 3.961 8 H 0.093 0.907 9 C -0.158 4.158 10 C -0.179 4.179 11 C 0.024 3.976 12 H 0.114 0.886 13 O -0.299 6.299 14 C 0.504 3.496 15 F -0.157 7.157 16 F -0.131 7.131 17 F -0.158 7.158 18 C -0.145 4.145 19 C -0.152 4.152 20 C -0.166 4.166 21 C -0.109 4.109 22 C -0.132 4.132 23 O -0.348 6.348 24 Si 0.678 3.322 25 O -0.069 6.069 26 H 0.113 0.887 27 H 0.119 0.881 28 H 0.116 0.884 29 H 0.250 0.750 30 H 0.077 0.923 31 H 0.100 0.900 32 H 0.094 0.906 33 H 0.092 0.908 34 H 0.112 0.888 35 H 0.096 0.904 36 H 0.112 0.888 37 H 0.111 0.889 38 H 0.196 0.804 39 H 0.157 0.843 40 H 0.250 0.750 41 H -0.224 1.224 42 H -0.206 1.206 Dipole moment (debyes) X Y Z Total from point charges 2.533 -3.647 -0.256 4.447 hybrid contribution 0.511 0.802 0.034 0.951 sum 3.044 -2.845 -0.222 4.173 Atomic orbital electron populations 1.20702 0.82669 1.05702 1.05030 1.23229 0.94760 0.83060 0.95862 1.21230 0.94210 0.93537 1.18362 1.17354 0.85258 0.84395 0.75118 1.90765 1.17941 1.84493 1.52156 1.45712 1.10115 1.05336 1.74684 1.21059 0.98906 0.79633 0.96480 0.90735 1.21793 1.02412 0.94544 0.97005 1.22104 0.98812 0.94694 1.02310 1.22846 0.98186 0.75825 1.00782 0.88623 1.88372 1.79388 1.27492 1.34616 1.19551 0.74353 0.77217 0.78483 1.93261 1.30634 1.96266 1.95509 1.93266 1.89344 1.34506 1.95964 1.93262 1.84002 1.82754 1.55785 1.21541 1.03812 0.96250 0.92889 1.21731 0.97930 0.92187 1.03328 1.22810 0.96432 0.93620 1.03712 1.22911 0.82861 0.96094 1.09081 1.24428 0.90335 1.06997 0.91460 1.86533 1.39634 1.93112 1.15504 0.93273 0.79759 0.73080 0.86088 1.83672 1.16781 1.35003 1.71450 0.88698 0.88058 0.88400 0.74953 0.92262 0.89976 0.90592 0.90801 0.88811 0.90387 0.88828 0.88875 0.80410 0.84262 0.74962 1.22355 1.20624 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 0.04 9.89 71.24 0.70 0.74 16 2 C 0.08 0.21 7.37 25.26 0.19 0.40 16 3 C -0.27 -0.69 6.31 -18.99 -0.12 -0.81 16 4 C 0.59 2.52 7.77 86.65 0.67 3.19 16 5 O -0.57 -6.12 14.51 -4.07 -0.06 -6.18 16 6 N -0.71 1.66 5.07 -445.85 -2.26 -0.60 16 7 C 0.14 -0.40 2.45 44.99 0.11 -0.29 16 8 H 0.07 0.14 7.58 -2.39 -0.02 0.12 16 9 C -0.12 0.25 5.49 30.60 0.17 0.42 16 10 C -0.14 0.21 5.39 30.59 0.17 0.38 16 11 C 0.08 -0.22 2.40 30.59 0.07 -0.15 16 12 H 0.10 -0.49 7.20 -2.39 -0.02 -0.51 16 13 O -0.37 -0.61 10.24 -148.98 -1.53 -2.13 16 14 C 0.60 1.34 3.71 113.37 0.42 1.76 16 15 F -0.17 -0.29 16.61 44.97 0.75 0.45 16 16 F -0.15 -0.67 17.53 44.97 0.79 0.12 16 17 F -0.18 -0.45 15.44 44.97 0.69 0.25 16 18 C -0.11 0.61 5.57 30.59 0.17 0.78 16 19 C -0.11 0.91 5.39 30.59 0.16 1.07 16 20 C -0.15 0.21 10.48 23.65 0.25 0.46 16 21 C -0.06 0.07 6.18 24.76 0.15 0.22 16 22 C -0.02 0.09 2.97 71.24 0.21 0.30 16 23 O -0.54 2.37 12.88 -148.98 -1.92 0.45 16 24 Si 0.77 -2.46 32.09 68.60 2.20 -0.26 16 25 O -0.17 -0.20 8.90 4.45 0.04 -0.16 16 26 H 0.09 -0.13 8.14 -2.39 -0.02 -0.15 16 27 H 0.10 -0.47 8.14 -2.39 -0.02 -0.49 16 28 H 0.10 0.26 6.49 -2.39 -0.02 0.24 16 29 H 0.41 -3.14 7.77 -92.71 -0.72 -3.86 16 30 H 0.06 0.15 8.14 -2.39 -0.02 0.13 16 31 H 0.08 -0.38 8.14 -2.39 -0.02 -0.40 16 32 H 0.08 -0.03 6.50 -2.39 -0.02 -0.05 16 33 H 0.07 0.03 8.14 -2.39 -0.02 0.01 16 34 H 0.09 -0.66 8.14 -2.39 -0.02 -0.68 16 35 H 0.08 -0.32 8.14 -2.39 -0.02 -0.34 16 36 H 0.09 -1.04 8.14 -2.39 -0.02 -1.05 16 37 H 0.09 -0.83 8.14 -2.39 -0.02 -0.85 16 38 H 0.18 -1.16 7.74 -2.91 -0.02 -1.19 16 39 H 0.14 -0.74 7.96 -2.39 -0.02 -0.75 16 40 H 0.40 -4.64 8.70 -74.06 -0.64 -5.29 16 41 H -0.30 -1.21 7.11 99.48 0.71 -0.50 16 42 H -0.28 -0.65 7.11 99.48 0.71 0.05 16 Total: 0.00 -16.96 362.11 1.80 -15.16 By element: Atomic # 1 Polarization: -15.32 SS G_CDS: -0.23 Total: -15.56 kcal Atomic # 6 Polarization: 5.13 SS G_CDS: 3.33 Total: 8.46 kcal Atomic # 7 Polarization: 1.66 SS G_CDS: -2.26 Total: -0.60 kcal Atomic # 8 Polarization: -4.56 SS G_CDS: -3.46 Total: -8.02 kcal Atomic # 9 Polarization: -1.41 SS G_CDS: 2.23 Total: 0.82 kcal Atomic # 14 Polarization: -2.46 SS G_CDS: 2.20 Total: -0.26 kcal Total: -16.96 1.80 -15.16 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17849236_13308374.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -250.664 kcal (2) G-P(sol) polarization free energy of solvation -16.963 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -267.628 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.802 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.162 kcal (6) G-S(sol) free energy of system = (1) + (5) -265.826 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.26 seconds