Wall clock time and date at job start Sun Mar 7 2021 15:02:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86301 * 109.47317 * 2 1 4 4 C 1.50701 * 109.47024 * 240.00278 * 2 1 3 5 5 C 1.33743 * 125.11733 * 299.99686 * 4 2 1 6 6 C 1.37802 * 115.08030 * 179.97438 * 5 4 2 7 7 C 1.34977 * 114.70103 * 0.02562 * 6 5 4 8 8 C 1.47565 * 125.27550 * 180.02562 * 7 6 5 9 9 C 1.39815 * 119.99672 * 179.97438 * 8 7 6 10 10 C 1.36570 * 119.99954 * 179.97438 * 9 8 7 11 11 C 1.39832 * 119.99525 * 0.25927 * 10 9 8 12 12 C 1.47563 * 119.99691 * 179.72634 * 11 10 9 13 13 O 1.21593 * 119.99944 * 359.97438 * 12 11 10 14 14 N 1.34777 * 119.99795 * 179.97438 * 12 11 10 15 15 C 1.46500 * 120.00064 * 180.02562 * 14 12 11 16 16 H 1.09008 * 109.47028 * 34.99535 * 15 14 12 17 17 C 1.52995 * 109.47495 * 154.99712 * 15 14 12 18 18 C 1.52998 * 109.47152 * 179.97438 * 17 15 14 19 19 C 1.53001 * 109.47229 * 299.99860 * 18 17 15 20 20 H 1.08993 * 109.47008 * 300.00448 * 19 18 17 21 21 O 1.42895 * 109.46700 * 179.97438 * 19 18 17 22 22 C 1.42905 * 113.99464 * 150.00225 * 21 19 18 23 23 F 1.39897 * 109.47272 * 60.00281 * 22 21 19 24 24 F 1.39905 * 109.47127 * 179.97438 * 22 21 19 25 25 F 1.39897 * 109.47226 * 299.99658 * 22 21 19 26 26 C 1.53001 * 109.46959 * 60.00338 * 19 18 17 27 27 C 1.53001 * 109.46744 * 275.00111 * 15 14 12 28 28 C 1.39828 * 120.00130 * 359.50888 * 11 10 9 29 29 C 1.36565 * 119.99829 * 0.46689 * 28 11 10 30 30 S 1.75861 * 125.12349 * 120.28122 * 4 2 1 31 31 H 0.96698 * 113.99893 * 59.99667 * 1 2 3 32 32 H 1.08997 * 109.47474 * 120.00427 * 2 1 3 33 33 H 1.48501 * 109.99784 * 60.00190 * 3 2 1 34 34 H 1.48498 * 109.99952 * 181.32233 * 3 2 1 35 35 H 1.08003 * 122.46036 * 0.02562 * 5 4 2 36 36 H 1.08003 * 122.64814 * 180.02562 * 6 5 4 37 37 H 1.07999 * 120.00101 * 359.95406 * 9 8 7 38 38 H 1.08002 * 119.99809 * 179.97438 * 10 9 8 39 39 H 0.97000 * 119.99891 * 359.97438 * 14 12 11 40 40 H 1.09004 * 109.47225 * 300.00095 * 17 15 14 41 41 H 1.09007 * 109.46745 * 59.99505 * 17 15 14 42 42 H 1.08999 * 109.46893 * 60.00310 * 18 17 15 43 43 H 1.09008 * 109.46869 * 179.97438 * 18 17 15 44 44 H 1.08999 * 109.47227 * 59.99511 * 26 19 18 45 45 H 1.08992 * 109.46925 * 180.02562 * 26 19 18 46 46 H 1.09008 * 109.46888 * 299.99510 * 27 15 14 47 47 H 1.08995 * 109.47849 * 59.99621 * 27 15 14 48 48 H 1.07995 * 120.00567 * 180.23525 * 28 11 10 49 49 H 1.07991 * 120.00541 * 179.77063 * 29 28 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 1.6721 -1.9847 -1.5429 6 6 2.2371 -2.4240 -2.7205 7 6 2.9666 -1.4969 -3.3764 8 6 3.6710 -1.7147 -4.6547 9 6 4.3969 -0.6725 -5.2392 10 6 5.0493 -0.8742 -6.4219 11 6 4.9866 -2.1215 -7.0510 12 6 5.6865 -2.3377 -8.3320 13 8 6.3172 -1.4311 -8.8407 14 7 5.6266 -3.5400 -8.9380 15 6 6.3218 -3.7549 -10.2095 16 1 7.2502 -3.1837 -10.2170 17 6 6.6372 -5.2430 -10.3733 18 6 7.3627 -5.4674 -11.7015 19 6 6.4698 -5.0054 -12.8549 20 1 5.5415 -5.5765 -12.8469 21 8 7.1477 -5.2144 -14.0953 22 6 6.2761 -5.4772 -15.1968 23 9 5.4117 -4.3921 -15.3767 24 9 7.0348 -5.6656 -16.3571 25 9 5.5288 -6.6305 -14.9354 26 6 6.1545 -3.5172 -12.6911 27 6 5.4294 -3.2926 -11.3631 28 6 4.2646 -3.1652 -6.4639 29 6 3.6127 -2.9635 -5.2809 30 16 2.9524 0.0093 -2.4683 31 1 -0.3933 0.4417 -0.7650 32 1 1.7924 -0.5139 0.8899 33 1 1.5616 2.4678 1.2085 34 1 3.5347 1.7702 -0.0322 35 1 1.0639 -2.6224 -0.9185 36 1 2.1066 -3.4306 -3.0894 37 1 4.4415 0.2921 -4.7556 38 1 5.6097 -0.0690 -6.8737 39 1 5.1237 -4.2633 -8.5320 40 1 7.2730 -5.5723 -9.5514 41 1 5.7087 -5.8141 -10.3658 42 1 8.2911 -4.8962 -11.7094 43 1 7.5878 -6.5276 -11.8180 44 1 7.0828 -2.9461 -12.6990 45 1 5.5180 -3.1882 -13.5124 46 1 4.5010 -3.8638 -11.3557 47 1 5.2047 -2.2325 -11.2465 48 1 4.2193 -4.1296 -6.9478 49 1 3.0520 -3.7684 -4.8293 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17849236_13308390.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 15:02:31 Heat of formation + Delta-G solvation = -220.800492 kcal Electronic energy + Delta-G solvation = -37408.111107 eV Core-core repulsion = 31784.472376 eV Total energy + Delta-G solvation = -5623.638731 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 428.110 amu Computer time = 1.51 seconds Orbital eigenvalues (eV) -51.18342 -48.91755 -48.87736 -41.60293 -40.63046 -39.81605 -39.08528 -37.93805 -37.41421 -35.05730 -33.54234 -32.37825 -32.14978 -30.82169 -29.82040 -27.28251 -26.29492 -24.89735 -24.21636 -24.01862 -23.71184 -23.10418 -21.63690 -21.42632 -20.42990 -20.32256 -19.90429 -19.71561 -19.25831 -18.62364 -17.81078 -17.44423 -16.95101 -16.66061 -16.32790 -16.29413 -16.24678 -16.06286 -15.96727 -15.64847 -15.63431 -15.50786 -15.43007 -15.28576 -15.07167 -15.03532 -15.00879 -14.75910 -14.61066 -14.45901 -14.43844 -14.27678 -13.96760 -13.94297 -13.67323 -13.51060 -13.39255 -13.16830 -13.10435 -12.82877 -12.62202 -12.42365 -12.29148 -12.22902 -12.14025 -11.76416 -11.63400 -11.33329 -10.99159 -10.85187 -10.58385 -10.27172 -10.19500 -9.61367 -9.09218 -5.22123 -0.94280 0.20106 0.26589 0.32106 0.69476 0.82541 1.15722 1.48603 1.55578 1.83538 1.92320 1.95814 2.07912 2.78676 2.98241 3.07736 3.28227 3.31561 3.36522 3.38628 3.55740 3.59047 3.64876 3.69447 3.72469 3.75034 3.85412 3.87742 4.09327 4.09949 4.17699 4.21222 4.28197 4.32810 4.37868 4.44737 4.46452 4.53036 4.61949 4.73876 4.81338 4.84872 4.89101 4.92113 4.97445 5.02662 5.04374 5.16012 5.20784 5.22974 5.24836 5.34259 5.39510 5.65306 6.35610 6.39892 7.11585 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.534 6.534 2 C -0.026 4.026 3 Si 0.651 3.349 4 C -0.219 4.219 5 C -0.104 4.104 6 C -0.119 4.119 7 C -0.148 4.148 8 C 0.014 3.986 9 C -0.120 4.120 10 C -0.049 4.049 11 C -0.137 4.137 12 C 0.561 3.439 13 O -0.531 6.531 14 N -0.724 5.724 15 C 0.141 3.859 16 H 0.096 0.904 17 C -0.124 4.124 18 C -0.110 4.110 19 C 0.083 3.917 20 H 0.084 0.916 21 O -0.366 6.366 22 C 0.594 3.406 23 F -0.174 7.174 24 F -0.141 7.141 25 F -0.176 7.176 26 C -0.145 4.145 27 C -0.126 4.126 28 C -0.078 4.078 29 C -0.110 4.110 30 S 0.133 5.867 31 H 0.381 0.619 32 H 0.124 0.876 33 H -0.232 1.232 34 H -0.237 1.237 35 H 0.146 0.854 36 H 0.145 0.855 37 H 0.131 0.869 38 H 0.142 0.858 39 H 0.400 0.600 40 H 0.084 0.916 41 H 0.075 0.925 42 H 0.084 0.916 43 H 0.084 0.916 44 H 0.083 0.917 45 H 0.081 0.919 46 H 0.069 0.931 47 H 0.080 0.920 48 H 0.130 0.870 49 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.629 -2.232 1.852 3.915 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.339 6.339 2 C -0.140 4.140 3 Si 0.551 3.449 4 C -0.336 4.336 5 C -0.134 4.134 6 C -0.150 4.150 7 C -0.265 4.265 8 C 0.011 3.989 9 C -0.139 4.139 10 C -0.067 4.067 11 C -0.141 4.141 12 C 0.349 3.651 13 O -0.408 6.408 14 N -0.376 5.376 15 C 0.037 3.963 16 H 0.114 0.886 17 C -0.162 4.162 18 C -0.148 4.148 19 C 0.027 3.973 20 H 0.102 0.898 21 O -0.290 6.290 22 C 0.502 3.498 23 F -0.156 7.156 24 F -0.123 7.123 25 F -0.158 7.158 26 C -0.183 4.183 27 C -0.165 4.165 28 C -0.097 4.097 29 C -0.130 4.130 30 S 0.400 5.600 31 H 0.229 0.771 32 H 0.141 0.859 33 H -0.155 1.155 34 H -0.161 1.161 35 H 0.164 0.836 36 H 0.162 0.838 37 H 0.149 0.851 38 H 0.160 0.840 39 H 0.236 0.764 40 H 0.103 0.897 41 H 0.093 0.907 42 H 0.103 0.897 43 H 0.103 0.897 44 H 0.102 0.898 45 H 0.100 0.900 46 H 0.088 0.912 47 H 0.099 0.901 48 H 0.148 0.852 49 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges -0.784 0.184 2.254 2.393 hybrid contribution -1.153 -2.483 0.293 2.754 sum -1.937 -2.299 2.547 3.940 Atomic orbital electron populations 1.86527 1.16549 1.81669 1.49202 1.24411 0.85219 1.09129 0.95194 0.95003 0.82274 0.77807 0.89850 1.25097 1.06942 0.99154 1.02429 1.20003 1.01155 0.94808 0.97412 1.20391 0.98636 1.00562 0.95367 1.23079 1.05958 0.98111 0.99390 1.18302 0.95229 0.94104 0.91219 1.20982 0.97971 0.98739 0.96187 1.20953 0.95935 0.96306 0.93539 1.20003 1.02243 0.95603 0.96211 1.18216 0.80250 0.82416 0.84243 1.90818 1.42024 1.42043 1.65892 1.45946 1.54167 1.13658 1.23802 1.21089 0.96506 0.96336 0.82373 0.88605 1.21785 1.01746 0.95135 0.97502 1.21534 0.99020 1.03184 0.91060 1.22655 0.96413 0.97515 0.80670 0.89827 1.88365 1.33155 1.90082 1.17425 1.19570 0.75586 0.74519 0.80098 1.93264 1.71230 1.55779 1.95369 1.93290 1.76644 1.94976 1.47379 1.93261 1.77618 1.51141 1.93771 1.22162 1.02699 0.94800 0.98653 1.21877 0.98624 1.03167 0.92836 1.20953 0.95442 0.98102 0.95191 1.20871 1.00244 0.96365 0.95497 1.84161 1.48614 1.12876 1.14333 0.77111 0.85892 1.15508 1.16128 0.83648 0.83754 0.85135 0.84046 0.76415 0.89692 0.90675 0.89712 0.89727 0.89815 0.90036 0.91246 0.90144 0.85228 0.84817 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.28 12.86 -35.23 -0.45 -0.18 16 2 C -0.03 0.02 2.96 36.01 0.11 0.13 16 3 Si 0.65 -0.80 30.96 -169.99 -5.26 -6.07 16 4 C -0.22 0.10 5.73 -35.88 -0.21 -0.11 16 5 C -0.10 0.05 10.00 -41.32 -0.41 -0.37 16 6 C -0.12 0.09 9.64 -40.90 -0.39 -0.30 16 7 C -0.15 0.01 6.37 -36.94 -0.24 -0.22 16 8 C 0.01 0.00 5.88 -104.91 -0.62 -0.62 16 9 C -0.12 0.00 9.54 -39.59 -0.38 -0.38 16 10 C -0.05 -0.03 9.53 -39.59 -0.38 -0.41 16 11 C -0.14 -0.02 5.88 -104.90 -0.62 -0.64 16 12 C 0.56 0.69 7.73 -12.46 -0.10 0.59 16 13 O -0.53 -2.64 15.99 5.28 0.08 -2.55 16 14 N -0.72 1.38 5.03 -54.84 -0.28 1.10 16 15 C 0.14 -0.26 2.45 -67.93 -0.17 -0.43 16 16 H 0.10 0.01 7.58 -51.92 -0.39 -0.39 16 17 C -0.12 0.48 5.39 -26.73 -0.14 0.34 16 18 C -0.11 0.31 5.57 -26.73 -0.15 0.17 16 19 C 0.08 -0.13 2.40 -26.73 -0.06 -0.19 16 20 H 0.08 -0.20 7.20 -51.93 -0.37 -0.57 16 21 O -0.37 -0.22 10.24 -35.23 -0.36 -0.58 16 22 C 0.59 0.53 3.71 101.05 0.37 0.91 16 23 F -0.17 -0.17 15.44 2.25 0.03 -0.14 16 24 F -0.14 -0.27 17.53 2.25 0.04 -0.23 16 25 F -0.18 -0.14 16.61 2.25 0.04 -0.11 16 26 C -0.14 0.18 5.39 -26.75 -0.14 0.04 16 27 C -0.13 0.19 5.49 -26.75 -0.15 0.05 16 28 C -0.08 0.16 9.48 -39.59 -0.38 -0.22 16 29 C -0.11 0.18 9.48 -39.59 -0.38 -0.20 16 30 S 0.13 -0.07 19.46 -107.50 -2.09 -2.16 16 31 H 0.38 -1.60 8.70 45.56 0.40 -1.20 16 32 H 0.12 -0.09 7.96 -51.93 -0.41 -0.51 16 33 H -0.23 -0.32 7.11 56.52 0.40 0.08 16 34 H -0.24 -0.22 7.11 56.52 0.40 0.18 16 35 H 0.15 -0.17 8.06 -52.48 -0.42 -0.60 16 36 H 0.14 -0.39 6.88 -52.48 -0.36 -0.75 16 37 H 0.13 -0.15 7.26 -52.49 -0.38 -0.53 16 38 H 0.14 0.10 7.64 -52.49 -0.40 -0.30 16 39 H 0.40 -1.84 6.61 -40.82 -0.27 -2.11 16 40 H 0.08 -0.37 8.14 -51.93 -0.42 -0.79 16 41 H 0.07 -0.38 8.14 -51.93 -0.42 -0.80 16 42 H 0.08 -0.20 8.14 -51.93 -0.42 -0.63 16 43 H 0.08 -0.27 8.14 -51.92 -0.42 -0.69 16 44 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 45 H 0.08 -0.06 6.50 -51.93 -0.34 -0.40 16 46 H 0.07 -0.17 8.14 -51.92 -0.42 -0.59 16 47 H 0.08 0.03 8.14 -51.93 -0.42 -0.39 16 48 H 0.13 -0.66 6.38 -52.49 -0.34 -0.99 16 49 H 0.13 -0.48 6.74 -52.49 -0.35 -0.84 16 LS Contribution 425.46 15.07 6.41 6.41 Total: 0.00 -7.58 425.46 -12.06 -19.64 By element: Atomic # 1 Polarization: -7.48 SS G_CDS: -5.80 Total: -13.28 kcal Atomic # 6 Polarization: 2.56 SS G_CDS: -4.42 Total: -1.86 kcal Atomic # 7 Polarization: 1.38 SS G_CDS: -0.28 Total: 1.10 kcal Atomic # 8 Polarization: -2.58 SS G_CDS: -0.73 Total: -3.30 kcal Atomic # 9 Polarization: -0.59 SS G_CDS: 0.11 Total: -0.48 kcal Atomic # 14 Polarization: -0.80 SS G_CDS: -5.26 Total: -6.07 kcal Atomic # 16 Polarization: -0.07 SS G_CDS: -2.09 Total: -2.16 kcal Total LS contribution 6.41 Total: 6.41 kcal Total: -7.58 -12.06 -19.64 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17849236_13308390.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -201.161 kcal (2) G-P(sol) polarization free energy of solvation -7.583 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -208.744 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.056 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.639 kcal (6) G-S(sol) free energy of system = (1) + (5) -220.800 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.51 seconds