Wall clock time and date at job start Sun Mar 7 2021 15:02:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 C 1.37794 * 119.84441 * 2 1 4 4 C 1.39713 * 119.90037 * 180.25324 * 3 2 1 5 5 C 1.47542 * 120.18767 * 179.74520 * 4 3 2 6 6 O 1.21590 * 119.99975 * 179.72466 * 5 4 3 7 7 N 1.34778 * 119.99973 * 359.72365 * 5 4 3 8 8 C 1.46499 * 119.99771 * 179.97438 * 7 5 4 9 9 H 1.08992 * 109.47397 * 325.00275 * 8 7 5 10 10 C 1.53002 * 109.46799 * 85.00174 * 8 7 5 11 11 C 1.52997 * 109.46817 * 179.97438 * 10 8 7 12 12 C 1.53005 * 109.47452 * 300.00239 * 11 10 8 13 13 H 1.09002 * 109.46935 * 300.00125 * 12 11 10 14 14 O 1.42900 * 109.47304 * 180.02562 * 12 11 10 15 15 C 1.42894 * 114.00094 * 149.99714 * 14 12 11 16 16 F 1.39910 * 109.47237 * 59.99880 * 15 14 12 17 17 F 1.39899 * 109.47168 * 179.97438 * 15 14 12 18 18 F 1.39902 * 109.47353 * 299.99910 * 15 14 12 19 19 C 1.52999 * 109.47159 * 59.99536 * 12 11 10 20 20 C 1.52997 * 109.47317 * 300.00546 * 19 12 11 21 21 C 1.40134 * 119.62027 * 359.47603 * 4 3 2 22 22 O 1.35653 * 120.15080 * 180.27302 * 21 4 3 23 23 C 1.38707 * 119.69895 * 0.24549 * 21 4 3 24 24 C 1.50704 * 119.95936 * 180.02562 * 23 21 4 25 25 O 1.42900 * 109.47030 * 285.00370 * 24 23 21 26 26 Si 1.86292 * 109.47339 * 165.00027 * 24 23 21 27 27 C 1.38061 * 120.08557 * 0.02683 * 23 21 4 28 28 H 1.08995 * 109.46470 * 270.27709 * 1 2 3 29 29 H 1.09001 * 109.47093 * 30.27756 * 1 2 3 30 30 H 1.09000 * 109.46762 * 150.27917 * 1 2 3 31 31 H 1.07996 * 120.05134 * 359.97438 * 3 2 1 32 32 H 0.97006 * 119.99662 * 0.02562 * 7 5 4 33 33 H 1.08993 * 109.47662 * 299.99952 * 10 8 7 34 34 H 1.09002 * 109.47075 * 60.00457 * 10 8 7 35 35 H 1.09002 * 109.47153 * 60.00231 * 11 10 8 36 36 H 1.09001 * 109.47289 * 180.02562 * 11 10 8 37 37 H 1.08996 * 109.46929 * 179.97438 * 19 12 11 38 38 H 1.09002 * 109.46716 * 60.00455 * 19 12 11 39 39 H 1.09002 * 109.47153 * 299.99641 * 20 19 12 40 40 H 1.09001 * 109.46832 * 179.97438 * 20 19 12 41 41 H 0.96706 * 113.99628 * 89.99321 * 22 21 4 42 42 H 1.09007 * 109.46746 * 44.99843 * 24 23 21 43 43 H 0.96698 * 113.99985 * 180.02562 * 25 24 23 44 44 H 1.48507 * 110.00202 * 298.68330 * 26 24 23 45 45 H 1.48499 * 110.00083 * 60.00226 * 26 24 23 46 46 H 1.07998 * 119.80189 * 179.97438 * 27 23 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.1928 1.1952 0.0000 4 6 3.5899 1.1966 -0.0054 5 6 4.3305 2.4726 -0.0111 6 8 5.5464 2.4698 -0.0106 7 7 3.6593 3.6413 -0.0167 8 6 4.3947 4.9084 -0.0218 9 1 5.3047 4.8027 0.5686 10 6 4.7605 5.2799 -1.4603 11 6 5.5280 6.6034 -1.4657 12 6 4.6524 7.7033 -0.8617 13 1 3.7424 7.8086 -1.4523 14 8 5.3691 8.9396 -0.8673 15 6 4.5355 10.0940 -0.9870 16 9 3.6434 10.1389 0.0898 17 9 5.3301 11.2454 -0.9820 18 9 3.8169 10.0281 -2.1855 19 6 4.2866 7.3316 0.5767 20 6 3.5191 6.0081 0.5821 21 6 4.2837 -0.0209 0.0004 22 8 5.6402 -0.0321 0.0009 23 6 3.5772 -1.2145 0.0063 24 6 4.3174 -2.5273 0.0131 25 8 4.8555 -2.7774 -1.2868 26 14 3.1445 -3.8992 0.4743 27 6 2.1966 -1.2016 0.0058 28 1 -0.3632 0.0050 1.0276 29 1 -0.3633 0.8875 -0.5181 30 1 -0.3633 -0.8925 -0.5095 31 1 1.6511 2.1295 -0.0004 32 1 2.6892 3.6435 -0.0167 33 1 5.3838 4.4963 -1.8907 34 1 3.8504 5.3857 -2.0508 35 1 6.4380 6.4981 -0.8750 36 1 5.7882 6.8684 -2.4905 37 1 3.6633 8.1154 1.0071 38 1 5.1966 7.2263 1.1673 39 1 2.6091 6.1134 -0.0086 40 1 3.2589 5.7432 1.6069 41 1 6.0332 -0.0312 0.8845 42 1 5.1287 -2.4831 0.7398 43 1 5.3459 -3.6079 -1.3564 44 1 2.6023 -3.6673 1.8373 45 1 2.0338 -3.9698 -0.5089 46 1 1.6511 -2.1336 0.0099 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17849236_13422088.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 15:02:38 Heat of formation + Delta-G solvation = -294.044957 kcal Electronic energy + Delta-G solvation = -35085.964141 eV Core-core repulsion = 29719.757035 eV Total energy + Delta-G solvation = -5366.207107 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 376.138 amu Computer time = 1.25 seconds Orbital eigenvalues (eV) -51.18678 -48.91976 -48.88239 -41.83784 -40.85013 -39.77338 -38.13587 -37.87997 -37.47891 -34.94645 -33.28554 -32.95221 -32.13646 -29.98082 -27.72286 -26.82751 -26.42515 -25.20944 -24.11292 -23.32308 -21.93493 -21.56724 -21.19597 -20.39612 -19.91068 -19.69064 -19.54298 -18.44697 -18.35058 -17.91246 -17.09474 -16.79740 -16.57675 -16.19135 -15.99273 -15.92222 -15.64769 -15.58742 -15.47033 -15.32783 -15.28971 -15.10832 -15.03071 -14.95816 -14.91178 -14.69066 -14.59620 -14.39691 -14.26147 -14.02324 -13.77293 -13.48264 -13.25958 -13.02611 -12.93515 -12.86845 -12.77132 -12.47375 -12.40215 -12.35502 -12.00826 -11.69592 -11.66648 -11.33811 -10.79802 -10.32225 -10.26328 -10.09028 -9.58675 -5.07276 -0.40350 -0.00810 0.82967 1.17103 1.53181 1.71316 1.84376 1.93478 2.07790 2.51936 2.98520 3.07089 3.08665 3.25895 3.32730 3.38841 3.48400 3.51272 3.69065 3.73355 3.77554 3.83001 3.92587 3.96207 4.01853 4.08835 4.17580 4.19221 4.29984 4.35620 4.47986 4.48346 4.49680 4.60513 4.64943 4.75643 4.84964 4.86708 4.88893 4.93462 4.97365 5.03610 5.12144 5.23245 5.26348 5.37164 5.49899 6.38395 6.62016 6.71897 7.17368 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.097 4.097 3 C -0.067 4.067 4 C -0.164 4.164 5 C 0.562 3.438 6 O -0.514 6.514 7 N -0.726 5.726 8 C 0.143 3.857 9 H 0.096 0.904 10 C -0.127 4.127 11 C -0.111 4.111 12 C 0.083 3.917 13 H 0.084 0.916 14 O -0.366 6.366 15 C 0.594 3.406 16 F -0.175 7.175 17 F -0.141 7.141 18 F -0.175 7.175 19 C -0.144 4.144 20 C -0.123 4.123 21 C 0.193 3.807 22 O -0.465 6.465 23 C -0.108 4.108 24 C -0.063 4.063 25 O -0.538 6.538 26 Si 0.684 3.316 27 C -0.081 4.081 28 H 0.076 0.924 29 H 0.073 0.927 30 H 0.070 0.930 31 H 0.133 0.867 32 H 0.399 0.601 33 H 0.083 0.917 34 H 0.070 0.930 35 H 0.083 0.917 36 H 0.082 0.918 37 H 0.083 0.917 38 H 0.084 0.916 39 H 0.073 0.927 40 H 0.081 0.919 41 H 0.393 0.607 42 H 0.072 0.928 43 H 0.382 0.618 44 H -0.253 1.253 45 H -0.249 1.249 46 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.052 -4.128 2.860 6.453 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C -0.097 4.097 3 C -0.086 4.086 4 C -0.168 4.168 5 C 0.349 3.651 6 O -0.389 6.389 7 N -0.379 5.379 8 C 0.039 3.961 9 H 0.114 0.886 10 C -0.166 4.166 11 C -0.149 4.149 12 C 0.028 3.972 13 H 0.102 0.898 14 O -0.290 6.290 15 C 0.502 3.498 16 F -0.157 7.157 17 F -0.123 7.123 18 F -0.158 7.158 19 C -0.182 4.182 20 C -0.161 4.161 21 C 0.146 3.854 22 O -0.275 6.275 23 C -0.109 4.109 24 C -0.174 4.174 25 O -0.344 6.344 26 Si 0.585 3.415 27 C -0.099 4.099 28 H 0.094 0.906 29 H 0.092 0.908 30 H 0.089 0.911 31 H 0.151 0.849 32 H 0.234 0.766 33 H 0.102 0.898 34 H 0.088 0.912 35 H 0.102 0.898 36 H 0.100 0.900 37 H 0.102 0.898 38 H 0.103 0.897 39 H 0.092 0.908 40 H 0.100 0.900 41 H 0.252 0.748 42 H 0.090 0.910 43 H 0.229 0.771 44 H -0.178 1.178 45 H -0.174 1.174 46 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges -4.145 -3.722 2.382 6.059 hybrid contribution -0.570 0.840 0.409 1.094 sum -4.714 -2.882 2.791 6.191 Atomic orbital electron populations 1.20838 0.89958 1.03570 1.02975 1.19772 0.96827 0.92181 1.00939 1.21115 0.92170 0.98181 0.97103 1.20369 0.93904 0.93466 1.09040 1.17986 0.87308 0.83230 0.76539 1.90841 1.12876 1.87200 1.48011 1.45951 1.10220 1.05338 1.76365 1.21063 0.96183 0.82063 0.96800 0.88646 1.21916 1.01111 0.96651 0.96891 1.21567 0.98957 0.91886 1.02467 1.22665 0.95861 0.80832 0.97881 0.89839 1.88376 1.33734 1.14064 1.92784 1.19585 0.75400 0.80559 0.74277 1.93259 1.69610 1.96280 1.56594 1.93288 1.74681 1.48032 1.96276 1.93265 1.79008 1.96082 1.47405 1.22145 1.02254 0.97867 0.95922 1.21759 0.98591 0.93358 1.02428 1.18183 0.83944 0.89578 0.93707 1.84808 1.13983 1.95854 1.32905 1.19728 0.93292 0.93879 1.03970 1.24519 1.03465 0.99978 0.89395 1.86551 1.74407 1.45239 1.28222 0.95096 0.80419 0.86119 0.79842 1.21018 0.93014 0.98161 0.97707 0.90565 0.90803 0.91128 0.84944 0.76604 0.89823 0.91168 0.89798 0.89970 0.89824 0.89721 0.90827 0.90018 0.74848 0.90970 0.77086 1.17779 1.17392 0.85314 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.26 10.00 36.01 0.36 0.62 16 2 C -0.10 -0.01 5.87 -104.67 -0.61 -0.62 16 3 C -0.07 0.02 9.18 -39.19 -0.36 -0.34 16 4 C -0.16 -0.33 5.89 -104.84 -0.62 -0.95 16 5 C 0.56 1.40 7.73 -12.47 -0.10 1.30 16 6 O -0.51 -3.00 14.82 -16.59 -0.25 -3.25 16 7 N -0.73 0.65 5.03 -54.85 -0.28 0.38 16 8 C 0.14 -0.16 2.45 -67.93 -0.17 -0.33 16 9 H 0.10 0.06 7.58 -51.93 -0.39 -0.33 16 10 C -0.13 0.12 5.49 -26.73 -0.15 -0.03 16 11 C -0.11 0.11 5.57 -26.73 -0.15 -0.04 16 12 C 0.08 -0.08 2.40 -26.73 -0.06 -0.15 16 13 H 0.08 -0.15 7.20 -51.93 -0.37 -0.52 16 14 O -0.37 -0.37 10.24 -35.23 -0.36 -0.73 16 15 C 0.59 0.66 3.71 101.05 0.37 1.03 16 16 F -0.18 -0.14 15.44 2.25 0.03 -0.11 16 17 F -0.14 -0.30 17.53 2.25 0.04 -0.26 16 18 F -0.18 -0.21 16.61 2.25 0.04 -0.18 16 19 C -0.14 0.28 5.39 -26.73 -0.14 0.14 16 20 C -0.12 0.37 5.39 -26.73 -0.14 0.23 16 21 C 0.19 0.61 6.69 -38.70 -0.26 0.35 16 22 O -0.46 -1.65 10.91 -40.54 -0.44 -2.10 16 23 C -0.11 -0.25 5.30 -104.51 -0.55 -0.80 16 24 C -0.06 -0.01 2.37 36.01 0.09 0.07 16 25 O -0.54 -0.71 12.86 -35.23 -0.45 -1.16 16 26 Si 0.68 -1.04 30.19 -169.99 -5.13 -6.17 16 27 C -0.08 -0.12 8.30 -39.53 -0.33 -0.45 16 28 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 29 H 0.07 -0.25 8.08 -51.93 -0.42 -0.67 16 30 H 0.07 -0.15 8.08 -51.93 -0.42 -0.57 16 31 H 0.13 -0.47 6.40 -52.49 -0.34 -0.81 16 32 H 0.40 -1.38 6.63 -40.82 -0.27 -1.65 16 33 H 0.08 0.10 8.14 -51.93 -0.42 -0.32 16 34 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 35 H 0.08 -0.04 8.14 -51.93 -0.42 -0.47 16 36 H 0.08 -0.08 8.14 -51.93 -0.42 -0.51 16 37 H 0.08 -0.15 6.50 -51.93 -0.34 -0.49 16 38 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 39 H 0.07 -0.30 8.14 -51.93 -0.42 -0.72 16 40 H 0.08 -0.28 8.14 -51.93 -0.42 -0.70 16 41 H 0.39 -0.14 9.06 45.56 0.41 0.27 16 42 H 0.07 -0.10 7.83 -51.93 -0.41 -0.51 16 43 H 0.38 -1.47 8.74 45.56 0.40 -1.07 16 44 H -0.25 -0.17 7.11 56.52 0.40 0.24 16 45 H -0.25 -0.28 6.74 56.52 0.38 0.10 16 46 H 0.13 0.10 4.87 -52.49 -0.26 -0.16 16 LS Contribution 385.34 15.07 5.81 5.81 Total: 0.00 -9.56 385.34 -8.82 -18.37 By element: Atomic # 1 Polarization: -5.64 SS G_CDS: -5.00 Total: -10.64 kcal Atomic # 6 Polarization: 2.86 SS G_CDS: -2.82 Total: 0.04 kcal Atomic # 7 Polarization: 0.65 SS G_CDS: -0.28 Total: 0.38 kcal Atomic # 8 Polarization: -5.73 SS G_CDS: -1.50 Total: -7.24 kcal Atomic # 9 Polarization: -0.66 SS G_CDS: 0.11 Total: -0.54 kcal Atomic # 14 Polarization: -1.04 SS G_CDS: -5.13 Total: -6.17 kcal Total LS contribution 5.81 Total: 5.81 kcal Total: -9.56 -8.82 -18.37 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17849236_13422088.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -275.673 kcal (2) G-P(sol) polarization free energy of solvation -9.556 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -285.228 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.817 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.372 kcal (6) G-S(sol) free energy of system = (1) + (5) -294.045 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.25 seconds