Wall clock time and date at job start Sun Mar 7 2021 15:02:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 C 1.37794 * 119.84441 * 2 1 4 4 C 1.39713 * 119.90037 * 180.25324 * 3 2 1 5 5 C 1.47542 * 120.18767 * 179.74520 * 4 3 2 6 6 O 1.21590 * 119.99975 * 179.72466 * 5 4 3 7 7 N 1.34778 * 119.99973 * 359.72365 * 5 4 3 8 8 C 1.46499 * 119.99771 * 179.97438 * 7 5 4 9 9 H 1.08992 * 109.47397 * 325.00275 * 8 7 5 10 10 C 1.53002 * 109.46799 * 85.00174 * 8 7 5 11 11 C 1.52997 * 109.46817 * 179.97438 * 10 8 7 12 12 C 1.53005 * 109.47452 * 300.00239 * 11 10 8 13 13 H 1.09002 * 109.46935 * 300.00125 * 12 11 10 14 14 O 1.42900 * 109.47304 * 180.02562 * 12 11 10 15 15 C 1.42894 * 114.00094 * 149.99714 * 14 12 11 16 16 F 1.39910 * 109.47237 * 59.99880 * 15 14 12 17 17 F 1.39899 * 109.47168 * 179.97438 * 15 14 12 18 18 F 1.39902 * 109.47353 * 299.99910 * 15 14 12 19 19 C 1.52999 * 109.47159 * 59.99536 * 12 11 10 20 20 C 1.52997 * 109.47317 * 300.00546 * 19 12 11 21 21 C 1.40134 * 119.62027 * 359.47603 * 4 3 2 22 22 O 1.35653 * 120.15080 * 180.27302 * 21 4 3 23 23 C 1.38707 * 119.69895 * 0.24549 * 21 4 3 24 24 C 1.50704 * 119.95936 * 180.02562 * 23 21 4 25 25 O 1.42900 * 109.47030 * 285.00370 * 24 23 21 26 26 Si 1.86292 * 109.47339 * 165.00027 * 24 23 21 27 27 C 1.38061 * 120.08557 * 0.02683 * 23 21 4 28 28 H 1.08995 * 109.46470 * 270.27709 * 1 2 3 29 29 H 1.09001 * 109.47093 * 30.27756 * 1 2 3 30 30 H 1.09000 * 109.46762 * 150.27917 * 1 2 3 31 31 H 1.07996 * 120.05134 * 359.97438 * 3 2 1 32 32 H 0.97006 * 119.99662 * 0.02562 * 7 5 4 33 33 H 1.08993 * 109.47662 * 299.99952 * 10 8 7 34 34 H 1.09002 * 109.47075 * 60.00457 * 10 8 7 35 35 H 1.09002 * 109.47153 * 60.00231 * 11 10 8 36 36 H 1.09001 * 109.47289 * 180.02562 * 11 10 8 37 37 H 1.08996 * 109.46929 * 179.97438 * 19 12 11 38 38 H 1.09002 * 109.46716 * 60.00455 * 19 12 11 39 39 H 1.09002 * 109.47153 * 299.99641 * 20 19 12 40 40 H 1.09001 * 109.46832 * 179.97438 * 20 19 12 41 41 H 0.96706 * 113.99628 * 89.99321 * 22 21 4 42 42 H 1.09007 * 109.46746 * 44.99843 * 24 23 21 43 43 H 0.96698 * 113.99985 * 180.02562 * 25 24 23 44 44 H 1.48507 * 110.00202 * 298.68330 * 26 24 23 45 45 H 1.48499 * 110.00083 * 60.00226 * 26 24 23 46 46 H 1.07998 * 119.80189 * 179.97438 * 27 23 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.1928 1.1952 0.0000 4 6 3.5899 1.1966 -0.0054 5 6 4.3305 2.4726 -0.0111 6 8 5.5464 2.4698 -0.0106 7 7 3.6593 3.6413 -0.0167 8 6 4.3947 4.9084 -0.0218 9 1 5.3047 4.8027 0.5686 10 6 4.7605 5.2799 -1.4603 11 6 5.5280 6.6034 -1.4657 12 6 4.6524 7.7033 -0.8617 13 1 3.7424 7.8086 -1.4523 14 8 5.3691 8.9396 -0.8673 15 6 4.5355 10.0940 -0.9870 16 9 3.6434 10.1389 0.0898 17 9 5.3301 11.2454 -0.9820 18 9 3.8169 10.0281 -2.1855 19 6 4.2866 7.3316 0.5767 20 6 3.5191 6.0081 0.5821 21 6 4.2837 -0.0209 0.0004 22 8 5.6402 -0.0321 0.0009 23 6 3.5772 -1.2145 0.0063 24 6 4.3174 -2.5273 0.0131 25 8 4.8555 -2.7774 -1.2868 26 14 3.1445 -3.8992 0.4743 27 6 2.1966 -1.2016 0.0058 28 1 -0.3632 0.0050 1.0276 29 1 -0.3633 0.8875 -0.5181 30 1 -0.3633 -0.8925 -0.5095 31 1 1.6511 2.1295 -0.0004 32 1 2.6892 3.6435 -0.0167 33 1 5.3838 4.4963 -1.8907 34 1 3.8504 5.3857 -2.0508 35 1 6.4380 6.4981 -0.8750 36 1 5.7882 6.8684 -2.4905 37 1 3.6633 8.1154 1.0071 38 1 5.1966 7.2263 1.1673 39 1 2.6091 6.1134 -0.0086 40 1 3.2589 5.7432 1.6069 41 1 6.0332 -0.0312 0.8845 42 1 5.1287 -2.4831 0.7398 43 1 5.3459 -3.6079 -1.3564 44 1 2.6023 -3.6673 1.8373 45 1 2.0338 -3.9698 -0.5089 46 1 1.6511 -2.1336 0.0099 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17849236_13422088.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 15:02:37 Heat of formation + Delta-G solvation = -295.262215 kcal Electronic energy + Delta-G solvation = -35086.016926 eV Core-core repulsion = 29719.757035 eV Total energy + Delta-G solvation = -5366.259891 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 376.138 amu Computer time = 1.49 seconds Orbital eigenvalues (eV) -51.27009 -49.02643 -48.94914 -41.91034 -40.83650 -39.85323 -38.22273 -37.90731 -37.53626 -35.03113 -33.29145 -32.96870 -32.02444 -29.95767 -27.65313 -26.83564 -26.48426 -25.27373 -24.01188 -23.30061 -21.94465 -21.57389 -21.21813 -20.43893 -19.98252 -19.75250 -19.63584 -18.46209 -18.39132 -17.96086 -17.08883 -16.89484 -16.61684 -16.19515 -16.05322 -15.97581 -15.74720 -15.61196 -15.44701 -15.38617 -15.37007 -15.15958 -15.10751 -15.01183 -14.91542 -14.68332 -14.53001 -14.35475 -14.25509 -14.03139 -13.75406 -13.38344 -13.15020 -13.02269 -12.90668 -12.80270 -12.74179 -12.49023 -12.31864 -12.27267 -12.05290 -11.78423 -11.57165 -11.27556 -10.96320 -10.37169 -10.29698 -10.10612 -9.62630 -4.97083 -0.48661 -0.04705 0.78600 1.23904 1.58021 1.64016 1.88425 1.91537 2.04228 2.44994 2.92314 3.02869 3.04048 3.28968 3.38529 3.47724 3.49601 3.56326 3.78444 3.81530 3.84156 3.92951 3.96455 4.01284 4.06756 4.18739 4.21741 4.32450 4.38886 4.42890 4.50486 4.58795 4.66909 4.71196 4.73220 4.84838 4.92079 4.97978 4.99324 5.02234 5.07371 5.08083 5.15082 5.26009 5.31422 5.39152 5.53035 6.40283 6.65470 6.87276 7.09920 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.098 4.098 3 C -0.059 4.059 4 C -0.177 4.177 5 C 0.559 3.441 6 O -0.557 6.557 7 N -0.708 5.708 8 C 0.144 3.856 9 H 0.073 0.927 10 C -0.120 4.120 11 C -0.107 4.107 12 C 0.079 3.921 13 H 0.097 0.903 14 O -0.377 6.377 15 C 0.597 3.403 16 F -0.172 7.172 17 F -0.150 7.150 18 F -0.176 7.176 19 C -0.141 4.141 20 C -0.113 4.113 21 C 0.168 3.832 22 O -0.484 6.484 23 C -0.127 4.127 24 C -0.081 4.081 25 O -0.564 6.564 26 Si 0.781 3.219 27 C -0.097 4.097 28 H 0.087 0.913 29 H 0.091 0.909 30 H 0.068 0.932 31 H 0.168 0.832 32 H 0.414 0.586 33 H 0.058 0.942 34 H 0.086 0.914 35 H 0.073 0.927 36 H 0.081 0.919 37 H 0.087 0.913 38 H 0.076 0.924 39 H 0.094 0.906 40 H 0.091 0.909 41 H 0.403 0.597 42 H 0.083 0.917 43 H 0.401 0.599 44 H -0.282 1.282 45 H -0.285 1.285 46 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.086 -3.817 3.117 7.831 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C -0.098 4.098 3 C -0.077 4.077 4 C -0.181 4.181 5 C 0.347 3.653 6 O -0.436 6.436 7 N -0.361 5.361 8 C 0.039 3.961 9 H 0.091 0.909 10 C -0.159 4.159 11 C -0.145 4.145 12 C 0.024 3.976 13 H 0.115 0.885 14 O -0.301 6.301 15 C 0.505 3.495 16 F -0.155 7.155 17 F -0.131 7.131 18 F -0.158 7.158 19 C -0.179 4.179 20 C -0.151 4.151 21 C 0.121 3.879 22 O -0.296 6.296 23 C -0.128 4.128 24 C -0.189 4.189 25 O -0.373 6.373 26 Si 0.685 3.315 27 C -0.115 4.115 28 H 0.106 0.894 29 H 0.110 0.890 30 H 0.087 0.913 31 H 0.186 0.814 32 H 0.252 0.748 33 H 0.076 0.924 34 H 0.104 0.896 35 H 0.092 0.908 36 H 0.100 0.900 37 H 0.106 0.894 38 H 0.095 0.905 39 H 0.113 0.887 40 H 0.110 0.890 41 H 0.262 0.738 42 H 0.101 0.899 43 H 0.251 0.749 44 H -0.208 1.208 45 H -0.213 1.213 46 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges -6.180 -3.404 2.640 7.533 hybrid contribution 0.052 0.763 0.317 0.828 sum -6.128 -2.640 2.957 7.298 Atomic orbital electron populations 1.20919 0.88007 1.04437 1.03950 1.20122 0.98229 0.91767 0.99705 1.21449 0.91160 0.99594 0.95511 1.20490 0.95002 0.92866 1.09730 1.18163 0.86888 0.84162 0.76057 1.90815 1.14712 1.87801 1.50267 1.45807 1.10961 1.04497 1.74839 1.21058 0.96006 0.82503 0.96487 0.90851 1.21826 1.01249 0.95753 0.97084 1.21507 0.98693 0.92020 1.02311 1.22820 0.96032 0.79962 0.98754 0.88504 1.88376 1.34290 1.14588 1.92831 1.19529 0.75306 0.80383 0.74305 1.93261 1.69476 1.96268 1.56453 1.93268 1.74943 1.48598 1.96318 1.93262 1.78989 1.96075 1.47463 1.22123 1.02185 0.98517 0.95120 1.21707 0.98557 0.91630 1.03209 1.18475 0.83819 0.90543 0.95083 1.84763 1.14773 1.95998 1.34096 1.20034 0.93930 0.94576 1.04240 1.24877 1.04588 1.00203 0.89268 1.86491 1.74985 1.46948 1.28926 0.94023 0.77457 0.83896 0.76170 1.21236 0.92917 0.99096 0.98232 0.89430 0.88983 0.91257 0.81436 0.74764 0.92358 0.89557 0.90845 0.90005 0.89418 0.90492 0.88705 0.89044 0.73770 0.89874 0.74859 1.20819 1.21260 0.85125 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.71 10.00 71.24 0.71 1.43 16 2 C -0.10 0.04 5.87 -19.90 -0.12 -0.07 16 3 C -0.06 0.09 9.18 22.52 0.21 0.30 16 4 C -0.18 -0.84 5.89 -20.01 -0.12 -0.96 16 5 C 0.56 3.35 7.73 86.70 0.67 4.02 16 6 O -0.56 -7.84 14.82 16.92 0.25 -7.59 16 7 N -0.71 1.58 5.03 -445.70 -2.24 -0.66 16 8 C 0.14 -0.33 2.45 44.99 0.11 -0.22 16 9 H 0.07 0.20 7.58 -2.39 -0.02 0.18 16 10 C -0.12 0.18 5.49 30.59 0.17 0.35 16 11 C -0.11 0.16 5.57 30.60 0.17 0.33 16 12 C 0.08 -0.19 2.40 30.60 0.07 -0.12 16 13 H 0.10 -0.48 7.20 -2.39 -0.02 -0.50 16 14 O -0.38 -0.77 10.24 -148.98 -1.53 -2.30 16 15 C 0.60 1.16 3.71 113.37 0.42 1.58 16 16 F -0.17 -0.16 15.44 44.97 0.69 0.54 16 17 F -0.15 -0.66 17.53 44.97 0.79 0.12 16 18 F -0.18 -0.33 16.61 44.97 0.75 0.42 16 19 C -0.14 0.65 5.39 30.59 0.17 0.81 16 20 C -0.11 0.85 5.39 30.59 0.16 1.02 16 21 C 0.17 1.35 6.69 22.84 0.15 1.50 16 22 O -0.48 -4.68 10.91 -68.77 -0.75 -5.43 16 23 C -0.13 -0.75 5.30 -19.79 -0.10 -0.86 16 24 C -0.08 -0.12 2.37 71.24 0.17 0.05 16 25 O -0.56 -2.11 12.86 -148.98 -1.92 -4.02 16 26 Si 0.78 -2.07 30.19 68.60 2.07 0.00 16 27 C -0.10 -0.34 8.30 22.30 0.19 -0.16 16 28 H 0.09 -0.70 8.14 -2.39 -0.02 -0.72 16 29 H 0.09 -0.87 8.08 -2.39 -0.02 -0.89 16 30 H 0.07 -0.37 8.08 -2.39 -0.02 -0.39 16 31 H 0.17 -1.65 6.40 -2.91 -0.02 -1.67 16 32 H 0.41 -3.69 6.63 -92.70 -0.61 -4.30 16 33 H 0.06 0.24 8.14 -2.39 -0.02 0.22 16 34 H 0.09 -0.40 8.14 -2.39 -0.02 -0.42 16 35 H 0.07 0.05 8.14 -2.39 -0.02 0.03 16 36 H 0.08 -0.11 8.14 -2.39 -0.02 -0.13 16 37 H 0.09 -0.43 6.50 -2.39 -0.02 -0.44 16 38 H 0.08 -0.22 8.14 -2.39 -0.02 -0.24 16 39 H 0.09 -1.05 8.14 -2.39 -0.02 -1.07 16 40 H 0.09 -0.80 8.14 -2.39 -0.02 -0.81 16 41 H 0.40 0.89 9.06 -74.05 -0.67 0.22 16 42 H 0.08 -0.14 7.83 -2.38 -0.02 -0.16 16 43 H 0.40 -2.82 8.74 -74.06 -0.65 -3.47 16 44 H -0.28 -0.50 7.11 99.48 0.71 0.20 16 45 H -0.29 -0.88 6.74 99.48 0.67 -0.21 16 46 H 0.13 0.30 4.87 -2.91 -0.01 0.28 16 Total: 0.00 -24.52 385.34 0.30 -24.22 By element: Atomic # 1 Polarization: -13.44 SS G_CDS: -0.85 Total: -14.30 kcal Atomic # 6 Polarization: 5.97 SS G_CDS: 3.03 Total: 9.00 kcal Atomic # 7 Polarization: 1.58 SS G_CDS: -2.24 Total: -0.66 kcal Atomic # 8 Polarization: -15.40 SS G_CDS: -3.94 Total: -19.34 kcal Atomic # 9 Polarization: -1.15 SS G_CDS: 2.23 Total: 1.08 kcal Atomic # 14 Polarization: -2.07 SS G_CDS: 2.07 Total: 0.00 kcal Total: -24.52 0.30 -24.22 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17849236_13422088.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -271.039 kcal (2) G-P(sol) polarization free energy of solvation -24.521 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -295.561 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.298 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.223 kcal (6) G-S(sol) free energy of system = (1) + (5) -295.262 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.49 seconds