Wall clock time and date at job start Sun Mar 7 2021 15:02:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46901 * 1 3 3 C 1.46898 * 111.00443 * 2 1 4 4 C 1.39043 * 110.99815 * 236.04799 * 2 1 3 5 5 C 1.39203 * 119.93121 * 240.00456 * 4 2 1 6 6 C 1.50697 * 119.96538 * 359.97438 * 5 4 2 7 7 O 1.42902 * 109.47290 * 285.00642 * 6 5 4 8 8 Si 1.86295 * 109.47105 * 165.00163 * 6 5 4 9 9 C 1.37629 * 120.06996 * 180.02562 * 5 4 2 10 10 C 1.39773 * 119.92914 * 359.97387 * 9 5 4 11 11 C 1.47522 * 120.06904 * 180.02562 * 10 9 5 12 12 O 1.21600 * 120.00119 * 0.02562 * 11 10 9 13 13 N 1.34779 * 120.00210 * 179.97438 * 11 10 9 14 14 C 1.46500 * 120.00114 * 179.97438 * 13 11 10 15 15 H 1.09010 * 109.46730 * 35.00487 * 14 13 11 16 16 C 1.52999 * 109.47099 * 155.00338 * 14 13 11 17 17 C 1.52999 * 109.47281 * 180.02562 * 16 14 13 18 18 C 1.53002 * 109.47150 * 300.00164 * 17 16 14 19 19 H 1.08998 * 109.47002 * 300.00084 * 18 17 16 20 20 O 1.42894 * 109.47173 * 179.97438 * 18 17 16 21 21 C 1.42902 * 114.00101 * 149.99915 * 20 18 17 22 22 F 1.39895 * 109.46824 * 59.99905 * 21 20 18 23 23 F 1.39901 * 109.47176 * 180.02562 * 21 20 18 24 24 F 1.39905 * 109.46848 * 300.00261 * 21 20 18 25 25 C 1.52999 * 109.46918 * 60.00064 * 18 17 16 26 26 C 1.53002 * 109.47526 * 275.00621 * 14 13 11 27 27 C 1.39819 * 119.86693 * 359.97438 * 10 9 5 28 28 C 1.37590 * 119.92402 * 359.75090 * 27 10 9 29 29 H 1.09002 * 109.47401 * 183.95136 * 1 2 3 30 30 H 1.09001 * 109.46874 * 63.95149 * 1 2 3 31 31 H 1.09004 * 109.46970 * 303.95282 * 1 2 3 32 32 H 1.09007 * 109.46909 * 60.00094 * 3 2 1 33 33 H 1.08998 * 109.47110 * 179.97438 * 3 2 1 34 34 H 1.09002 * 109.47061 * 300.00284 * 3 2 1 35 35 H 1.08998 * 109.47004 * 45.00152 * 6 5 4 36 36 H 0.96699 * 114.00359 * 59.99790 * 7 6 5 37 37 H 1.48498 * 110.00400 * 300.00155 * 8 6 5 38 38 H 1.48507 * 109.99907 * 61.32224 * 8 6 5 39 39 H 1.08002 * 120.03811 * 179.97438 * 9 5 4 40 40 H 0.96996 * 119.99978 * 0.02562 * 13 11 10 41 41 H 1.09003 * 109.46836 * 300.00411 * 16 14 13 42 42 H 1.08998 * 109.46901 * 60.00247 * 16 14 13 43 43 H 1.09001 * 109.46917 * 59.99698 * 17 16 14 44 44 H 1.08994 * 109.47062 * 179.97438 * 17 16 14 45 45 H 1.09001 * 109.47759 * 60.00092 * 25 18 17 46 46 H 1.09005 * 109.47105 * 180.02562 * 25 18 17 47 47 H 1.08998 * 109.47002 * 300.00076 * 26 14 13 48 48 H 1.09002 * 109.46702 * 59.99825 * 26 14 13 49 49 H 1.07995 * 120.03704 * 179.97438 * 27 10 9 50 50 H 1.08002 * 119.96190 * 180.24921 * 28 27 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9956 1.3714 0.0000 4 6 1.9673 -0.7250 -1.0768 5 6 2.7792 -1.8331 -0.8519 6 6 3.1173 -2.2448 0.5578 7 8 4.0867 -1.3442 1.0976 8 14 3.8119 -3.9734 0.5502 9 6 3.2744 -2.5525 -1.9156 10 6 2.9607 -2.1696 -3.2228 11 6 3.4893 -2.9388 -4.3652 12 8 4.1983 -3.9073 -4.1703 13 7 3.1856 -2.5688 -5.6252 14 6 3.7110 -3.3323 -6.7597 15 1 3.7583 -4.3889 -6.4958 16 6 2.7905 -3.1490 -7.9679 17 6 3.3388 -3.9469 -9.1526 18 6 4.7419 -3.4452 -9.4998 19 1 4.6950 -2.3887 -9.7638 20 8 5.2543 -4.1908 -10.6058 21 6 6.1614 -3.4571 -11.4311 22 9 7.2585 -3.0458 -10.6668 23 9 6.6019 -4.2724 -12.4792 24 9 5.5112 -2.3348 -11.9554 25 6 5.6625 -3.6286 -8.2915 26 6 5.1140 -2.8301 -7.1066 27 6 2.1440 -1.0568 -3.4454 28 6 1.6475 -0.3451 -2.3776 29 1 -0.3634 -1.0252 0.0708 30 1 -0.3633 0.4513 -0.9233 31 1 -0.3633 0.5740 0.8525 32 1 1.6461 1.8947 0.8901 33 1 3.0851 1.3422 0.0005 34 1 1.6460 1.8948 -0.8900 35 1 2.2160 -2.2181 1.1701 36 1 3.7923 -0.4238 1.1320 37 1 2.8133 -4.9197 -0.0089 38 1 5.0588 -4.0162 -0.2554 39 1 3.9046 -3.4119 -1.7405 40 1 2.6198 -1.7965 -5.7807 41 1 1.7910 -3.5068 -7.7207 42 1 2.7432 -2.0925 -8.2317 43 1 3.3858 -5.0034 -8.8885 44 1 2.6827 -3.8166 -10.0132 45 1 5.7094 -4.6850 -8.0274 46 1 6.6620 -3.2707 -8.5386 47 1 5.0668 -1.7735 -7.3704 48 1 5.7698 -2.9607 -6.2458 49 1 1.9003 -0.7583 -4.4543 50 1 1.0134 0.5121 -2.5488 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17849236_13422196.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 15:02:41 Heat of formation + Delta-G solvation = -237.009625 kcal Electronic energy + Delta-G solvation = -37026.228414 eV Core-core repulsion = 31604.675588 eV Total energy + Delta-G solvation = -5421.552826 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 389.165 amu Computer time = 1.51 seconds Orbital eigenvalues (eV) -51.29616 -49.05001 -48.97914 -41.93468 -41.03753 -40.13449 -38.13216 -37.69080 -37.34790 -35.13669 -32.94600 -32.05271 -31.62346 -29.92840 -28.58224 -26.96244 -26.64161 -25.97121 -24.13599 -23.82742 -23.18038 -22.79526 -21.59652 -21.09549 -20.48319 -20.00754 -19.78079 -19.19726 -18.23380 -17.89400 -17.64988 -17.06468 -16.64793 -16.48154 -16.35505 -16.05420 -15.98713 -15.85960 -15.77181 -15.60368 -15.45275 -15.40690 -15.19764 -15.17227 -15.12869 -15.08216 -14.73922 -14.69993 -14.38658 -14.11207 -13.98073 -13.89409 -13.58674 -13.41249 -13.17951 -13.13294 -13.03435 -12.83450 -12.73698 -12.66948 -12.36559 -12.33073 -12.18067 -11.68064 -11.45495 -11.36665 -11.24179 -11.01641 -10.36555 -10.23628 -9.89816 -9.64432 -4.93812 -0.53460 0.01043 0.76370 1.30004 1.48967 1.57422 1.83747 1.90869 2.00911 2.48972 2.67767 2.90239 3.00045 3.37344 3.43548 3.44929 3.48476 3.55812 3.74161 3.81988 3.84267 3.87531 3.96395 4.01135 4.04157 4.10910 4.15965 4.28422 4.35071 4.35875 4.38936 4.42773 4.55872 4.57381 4.59318 4.66729 4.69453 4.87080 4.90216 4.94855 4.96240 4.97863 4.98364 4.99505 5.03170 5.10621 5.11930 5.26839 5.33029 5.41618 5.75713 6.14477 6.31527 6.64572 6.98433 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 N -0.524 5.524 3 C 0.023 3.977 4 C 0.132 3.868 5 C -0.113 4.113 6 C -0.063 4.063 7 O -0.544 6.544 8 Si 0.794 3.206 9 C -0.083 4.083 10 C -0.149 4.149 11 C 0.556 3.444 12 O -0.582 6.582 13 N -0.702 5.702 14 C 0.140 3.860 15 H 0.070 0.930 16 C -0.112 4.112 17 C -0.108 4.108 18 C 0.080 3.920 19 H 0.099 0.901 20 O -0.375 6.375 21 C 0.596 3.404 22 F -0.176 7.176 23 F -0.149 7.149 24 F -0.173 7.173 25 C -0.142 4.142 26 C -0.120 4.120 27 C -0.056 4.056 28 C -0.148 4.148 29 H 0.065 0.935 30 H 0.045 0.955 31 H 0.090 0.910 32 H 0.093 0.907 33 H 0.069 0.931 34 H 0.043 0.957 35 H 0.097 0.903 36 H 0.374 0.626 37 H -0.275 1.275 38 H -0.303 1.303 39 H 0.110 0.890 40 H 0.418 0.582 41 H 0.096 0.904 42 H 0.099 0.901 43 H 0.075 0.925 44 H 0.097 0.903 45 H 0.070 0.930 46 H 0.076 0.924 47 H 0.088 0.912 48 H 0.052 0.948 49 H 0.168 0.832 50 H 0.159 0.841 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.017 7.628 1.055 11.117 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.121 4.121 2 N -0.245 5.245 3 C -0.123 4.123 4 C 0.038 3.962 5 C -0.115 4.115 6 C -0.173 4.173 7 O -0.351 6.351 8 Si 0.699 3.301 9 C -0.102 4.102 10 C -0.153 4.153 11 C 0.345 3.655 12 O -0.463 6.463 13 N -0.354 5.354 14 C 0.035 3.965 15 H 0.088 0.912 16 C -0.150 4.150 17 C -0.146 4.146 18 C 0.024 3.976 19 H 0.117 0.883 20 O -0.299 6.299 21 C 0.504 3.496 22 F -0.159 7.159 23 F -0.131 7.131 24 F -0.156 7.156 25 C -0.180 4.180 26 C -0.159 4.159 27 C -0.075 4.075 28 C -0.168 4.168 29 H 0.084 0.916 30 H 0.063 0.937 31 H 0.109 0.891 32 H 0.111 0.889 33 H 0.088 0.912 34 H 0.062 0.938 35 H 0.115 0.885 36 H 0.223 0.777 37 H -0.201 1.201 38 H -0.231 1.231 39 H 0.128 0.872 40 H 0.257 0.743 41 H 0.115 0.885 42 H 0.118 0.882 43 H 0.094 0.906 44 H 0.116 0.884 45 H 0.089 0.911 46 H 0.094 0.906 47 H 0.106 0.894 48 H 0.071 0.929 49 H 0.185 0.815 50 H 0.177 0.823 Dipole moment (debyes) X Y Z Total from point charges -6.864 5.364 1.147 8.787 hybrid contribution -0.399 1.688 -1.744 2.460 sum -7.263 7.052 -0.597 10.141 Atomic orbital electron populations 1.22554 0.84030 1.03029 1.02532 1.59440 1.10018 1.15284 1.39803 1.22601 1.00851 0.86017 1.02848 1.18940 0.94008 0.93022 0.90262 1.20324 0.98965 0.96140 0.96041 1.25031 0.97845 1.04318 0.90089 1.86688 1.41941 1.21817 1.84661 0.92828 0.76678 0.73162 0.87387 1.21062 0.97848 0.98657 0.92608 1.19899 1.03505 0.99384 0.92472 1.18435 0.79610 0.83404 0.84071 1.90802 1.39698 1.29765 1.86072 1.45766 1.52281 1.33186 1.04138 1.21126 0.93460 0.96199 0.85679 0.91169 1.21742 0.99076 1.02829 0.91345 1.21554 0.92296 1.01272 0.99444 1.22841 0.95184 0.96678 0.82858 0.88268 1.88375 1.59786 1.40474 1.41238 1.19553 0.77457 0.74950 0.77642 1.93261 1.56236 1.90617 1.75753 1.93269 1.89055 1.73700 1.57044 1.93262 1.81373 1.53753 1.87172 1.22120 0.99548 1.02050 0.94323 1.21812 0.96053 1.00945 0.97094 1.21494 0.93137 0.91657 1.01212 1.21932 1.01365 1.01476 0.92033 0.91635 0.93680 0.89087 0.88884 0.91221 0.93792 0.88538 0.77674 1.20095 1.23106 0.87240 0.74334 0.88513 0.88208 0.90638 0.88417 0.91129 0.90586 0.89358 0.92945 0.81512 0.82348 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.16 9.33 127.69 1.19 1.03 16 2 N -0.52 2.07 3.70 -745.08 -2.76 -0.69 16 3 C 0.02 -0.16 9.00 127.69 1.15 0.99 16 4 C 0.13 -0.06 4.65 38.47 0.18 0.12 16 5 C -0.11 -0.55 5.28 -19.78 -0.10 -0.66 16 6 C -0.06 -0.24 2.29 71.24 0.16 -0.08 16 7 O -0.54 -2.54 12.65 -148.98 -1.89 -4.43 16 8 Si 0.79 4.51 30.40 68.60 2.09 6.59 16 9 C -0.08 -0.75 8.19 22.50 0.18 -0.56 16 10 C -0.15 -0.67 5.88 -20.08 -0.12 -0.79 16 11 C 0.56 3.84 7.73 86.69 0.67 4.51 16 12 O -0.58 -9.87 16.00 -4.03 -0.06 -9.93 16 13 N -0.70 1.63 5.03 -445.69 -2.24 -0.61 16 14 C 0.14 -0.29 2.45 44.99 0.11 -0.18 16 15 H 0.07 0.26 7.58 -2.38 -0.02 0.25 16 16 C -0.11 0.97 5.39 30.59 0.16 1.14 16 17 C -0.11 0.63 5.57 30.59 0.17 0.80 16 18 C 0.08 -0.21 2.40 30.59 0.07 -0.14 16 19 H 0.10 -0.56 7.20 -2.39 -0.02 -0.57 16 20 O -0.37 -0.71 10.23 -148.98 -1.52 -2.24 16 21 C 0.60 1.46 3.71 113.37 0.42 1.88 16 22 F -0.18 -0.54 15.44 44.97 0.69 0.16 16 23 F -0.15 -0.71 17.53 44.97 0.79 0.08 16 24 F -0.17 -0.26 16.61 44.97 0.75 0.49 16 25 C -0.14 0.06 5.39 30.61 0.17 0.22 16 26 C -0.12 0.11 5.50 30.61 0.17 0.28 16 27 C -0.06 0.22 9.53 22.50 0.21 0.43 16 28 C -0.15 0.63 8.58 22.36 0.19 0.82 16 29 H 0.06 -0.31 8.14 -2.39 -0.02 -0.33 16 30 H 0.04 -0.38 7.08 -2.39 -0.02 -0.39 16 31 H 0.09 -0.78 8.14 -2.38 -0.02 -0.80 16 32 H 0.09 -0.86 8.14 -2.38 -0.02 -0.88 16 33 H 0.07 -0.43 7.51 -2.39 -0.02 -0.44 16 34 H 0.04 -0.37 7.47 -2.39 -0.02 -0.39 16 35 H 0.10 0.07 7.77 -2.39 -0.02 0.06 16 36 H 0.37 -0.04 7.56 -74.06 -0.56 -0.60 16 37 H -0.27 -2.59 7.11 99.48 0.71 -1.88 16 38 H -0.30 -4.35 6.81 99.48 0.68 -3.67 16 39 H 0.11 1.58 4.50 -2.91 -0.01 1.57 16 40 H 0.42 -4.18 6.62 -92.71 -0.61 -4.80 16 41 H 0.10 -0.98 8.14 -2.39 -0.02 -1.00 16 42 H 0.10 -1.28 8.14 -2.39 -0.02 -1.30 16 43 H 0.07 -0.28 8.14 -2.39 -0.02 -0.30 16 44 H 0.10 -0.76 8.14 -2.39 -0.02 -0.78 16 45 H 0.07 0.15 8.14 -2.39 -0.02 0.13 16 46 H 0.08 0.06 6.50 -2.38 -0.02 0.04 16 47 H 0.09 -0.41 8.14 -2.39 -0.02 -0.43 16 48 H 0.05 0.27 8.14 -2.39 -0.02 0.25 16 49 H 0.17 -2.03 6.39 -2.91 -0.02 -2.05 16 50 H 0.16 -1.51 7.01 -2.91 -0.02 -1.53 16 Total: 0.00 -21.28 407.01 0.68 -20.61 By element: Atomic # 1 Polarization: -19.70 SS G_CDS: -0.16 Total: -19.86 kcal Atomic # 6 Polarization: 4.83 SS G_CDS: 4.99 Total: 9.82 kcal Atomic # 7 Polarization: 3.70 SS G_CDS: -5.00 Total: -1.30 kcal Atomic # 8 Polarization: -13.12 SS G_CDS: -3.47 Total: -16.59 kcal Atomic # 9 Polarization: -1.50 SS G_CDS: 2.23 Total: 0.72 kcal Atomic # 14 Polarization: 4.51 SS G_CDS: 2.09 Total: 6.59 kcal Total: -21.28 0.68 -20.61 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17849236_13422196.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -216.402 kcal (2) G-P(sol) polarization free energy of solvation -21.285 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -237.687 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.677 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.607 kcal (6) G-S(sol) free energy of system = (1) + (5) -237.010 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.52 seconds