Wall clock time and date at job start Sun Mar 7 2021 15:02:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86301 * 109.47256 * 2 1 4 4 C 1.50699 * 109.46964 * 239.99985 * 2 1 3 5 5 C 1.32692 * 124.68716 * 299.72721 * 4 2 1 6 6 C 1.44500 * 113.10071 * 179.81792 * 5 4 2 7 7 C 1.47041 * 123.49447 * 180.23401 * 6 5 4 8 8 O 1.21659 * 120.00401 * 180.27414 * 7 6 5 9 9 N 1.34779 * 120.00022 * 0.27504 * 7 6 5 10 10 C 1.46500 * 119.99964 * 180.02562 * 9 7 6 11 11 H 1.08996 * 109.47331 * 34.99587 * 10 9 7 12 12 C 1.53003 * 109.46726 * 154.99901 * 10 9 7 13 13 C 1.53004 * 109.46743 * 179.97438 * 12 10 9 14 14 C 1.52999 * 109.47456 * 299.99971 * 13 12 10 15 15 H 1.09004 * 109.46859 * 300.00128 * 14 13 12 16 16 O 1.42892 * 109.47296 * 179.97438 * 14 13 12 17 17 C 1.42902 * 114.00201 * 150.00195 * 16 14 13 18 18 F 1.39900 * 109.47444 * 59.99962 * 17 16 14 19 19 F 1.39901 * 109.47498 * 180.02562 * 17 16 14 20 20 F 1.39905 * 109.46959 * 299.99720 * 17 16 14 21 21 C 1.53003 * 109.47125 * 59.99865 * 14 13 12 22 22 C 1.52999 * 109.46748 * 274.99391 * 10 9 7 23 23 C 1.36224 * 113.01745 * 0.45986 * 6 5 4 24 24 Cl 1.73605 * 124.61066 * 179.71927 * 23 6 5 25 25 S 1.70453 * 110.78612 * 359.75344 * 23 6 5 26 26 H 0.96698 * 113.99898 * 59.99565 * 1 2 3 27 27 H 1.09002 * 109.47259 * 120.00198 * 2 1 3 28 28 H 1.48504 * 110.00019 * 298.68426 * 3 2 1 29 29 H 1.48503 * 110.00152 * 60.00114 * 3 2 1 30 30 H 1.08001 * 123.44895 * 359.97438 * 5 4 2 31 31 H 0.96998 * 120.00093 * 359.97438 * 9 7 6 32 32 H 1.08991 * 109.47156 * 299.99184 * 12 10 9 33 33 H 1.08996 * 109.47472 * 59.99772 * 12 10 9 34 34 H 1.09004 * 109.47192 * 59.99896 * 13 12 10 35 35 H 1.08996 * 109.47187 * 179.97438 * 13 12 10 36 36 H 1.09004 * 109.47037 * 60.00373 * 21 14 13 37 37 H 1.08991 * 109.47203 * 179.97438 * 21 14 13 38 38 H 1.08996 * 109.47365 * 300.00176 * 22 10 9 39 39 H 1.09004 * 109.47216 * 60.00247 * 22 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 1.6729 -1.9771 -1.5295 6 6 2.2769 -2.4010 -2.7718 7 6 2.1337 -3.7568 -3.3227 8 8 2.6746 -4.0469 -4.3731 9 7 1.4033 -4.6782 -2.6639 10 6 1.2611 -6.0291 -3.2125 11 1 2.1864 -6.3183 -3.7106 12 6 0.9642 -7.0116 -2.0777 13 6 0.8151 -8.4224 -2.6507 14 6 -0.3357 -8.4446 -3.6587 15 1 -1.2609 -8.1552 -3.1602 16 8 -0.4746 -9.7621 -4.1942 17 6 -1.8109 -10.0977 -4.5732 18 9 -2.2559 -9.2046 -5.5537 19 9 -1.8383 -11.4007 -5.0817 20 9 -2.6471 -10.0166 -3.4544 21 6 -0.0389 -7.4621 -4.7934 22 6 0.1105 -6.0516 -4.2207 23 6 2.9968 -1.4158 -3.3775 24 17 3.8518 -1.5990 -4.8772 25 16 2.9449 0.0212 -2.4622 26 1 -0.3933 0.4418 -0.7650 27 1 1.7923 -0.5139 0.8900 28 1 1.5879 2.4586 -1.2242 29 1 1.5616 2.4679 1.2085 30 1 1.0705 -2.6243 -0.9091 31 1 0.9723 -4.4470 -1.8262 32 1 1.7839 -6.9956 -1.3595 33 1 0.0389 -6.7225 -1.5796 34 1 1.7403 -8.7118 -3.1492 35 1 0.6040 -9.1225 -1.8423 36 1 0.8863 -7.7515 -5.2918 37 1 -0.8584 -7.4782 -5.5117 38 1 -0.8148 -5.7625 -3.7225 39 1 0.3220 -5.3516 -5.0290 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17849236_13431040.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 15:02:50 Heat of formation + Delta-G solvation = -250.501471 kcal Electronic energy + Delta-G solvation = -31124.342753 eV Core-core repulsion = 25963.596098 eV Total energy + Delta-G solvation = -5160.746655 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 386.040 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -51.17298 -48.90787 -48.86675 -41.40402 -40.31308 -39.11663 -38.18209 -37.72279 -37.05475 -34.84595 -32.12944 -31.81123 -30.22781 -27.05882 -26.53539 -25.62708 -24.11687 -23.33188 -22.20769 -21.53259 -20.69301 -20.37804 -19.89397 -19.68090 -19.43355 -18.25576 -18.02492 -17.15599 -16.80881 -16.66469 -16.28666 -15.99590 -15.91597 -15.82275 -15.63227 -15.47155 -15.45645 -15.27562 -15.07585 -15.01677 -14.85768 -14.78976 -14.42098 -14.36974 -14.23017 -14.04571 -13.91708 -13.48718 -13.15300 -13.03855 -12.80312 -12.60359 -12.52356 -12.40150 -12.22051 -12.04061 -11.92612 -11.73926 -11.30414 -11.04177 -10.74368 -10.18848 -9.93819 -9.74412 -5.25743 -0.64297 -0.24600 0.38899 0.63631 0.83715 0.99745 1.05479 1.37018 1.73498 1.99094 2.13197 2.22851 2.99421 3.02952 3.08849 3.29633 3.35404 3.40463 3.66794 3.72206 3.78954 3.81738 3.87427 3.90148 4.12162 4.19965 4.22871 4.28806 4.39353 4.48278 4.62205 4.64368 4.76252 4.83818 4.87108 4.92842 5.00750 5.06800 5.26190 5.37911 6.10278 6.38196 7.15369 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.522 6.522 2 C -0.031 4.031 3 Si 0.646 3.354 4 C -0.234 4.234 5 C -0.071 4.071 6 C -0.160 4.160 7 C 0.577 3.423 8 O -0.516 6.516 9 N -0.721 5.721 10 C 0.143 3.857 11 H 0.096 0.904 12 C -0.123 4.123 13 C -0.110 4.110 14 C 0.083 3.917 15 H 0.084 0.916 16 O -0.366 6.366 17 C 0.594 3.406 18 F -0.174 7.174 19 F -0.142 7.142 20 F -0.176 7.176 21 C -0.145 4.145 22 C -0.126 4.126 23 C -0.115 4.115 24 Cl 0.027 6.973 25 S 0.239 5.761 26 H 0.380 0.620 27 H 0.132 0.868 28 H -0.236 1.236 29 H -0.230 1.230 30 H 0.157 0.843 31 H 0.400 0.600 32 H 0.085 0.915 33 H 0.074 0.926 34 H 0.084 0.916 35 H 0.084 0.916 36 H 0.083 0.917 37 H 0.081 0.919 38 H 0.068 0.932 39 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.693 3.269 5.008 6.020 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.328 6.328 2 C -0.143 4.143 3 Si 0.544 3.456 4 C -0.351 4.351 5 C -0.100 4.100 6 C -0.179 4.179 7 C 0.362 3.638 8 O -0.392 6.392 9 N -0.373 5.373 10 C 0.039 3.961 11 H 0.114 0.886 12 C -0.161 4.161 13 C -0.148 4.148 14 C 0.027 3.973 15 H 0.102 0.898 16 O -0.290 6.290 17 C 0.502 3.498 18 F -0.156 7.156 19 F -0.123 7.123 20 F -0.158 7.158 21 C -0.183 4.183 22 C -0.165 4.165 23 C -0.261 4.261 24 Cl 0.056 6.944 25 S 0.503 5.497 26 H 0.228 0.772 27 H 0.150 0.850 28 H -0.160 1.160 29 H -0.153 1.153 30 H 0.174 0.826 31 H 0.235 0.765 32 H 0.103 0.897 33 H 0.093 0.907 34 H 0.103 0.897 35 H 0.103 0.897 36 H 0.102 0.898 37 H 0.099 0.901 38 H 0.087 0.913 39 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges 1.785 4.885 4.430 6.832 hybrid contribution -2.144 -1.576 -0.229 2.670 sum -0.358 3.310 4.201 5.360 Atomic orbital electron populations 1.86638 1.16925 1.79870 1.49392 1.24392 0.83994 1.10074 0.95876 0.95251 0.91611 0.75109 0.83587 1.24754 1.08007 0.99191 1.03176 1.20991 0.99399 0.95017 0.94630 1.20219 1.04802 0.95468 0.97420 1.17402 0.78676 0.83507 0.84166 1.90889 1.46603 1.79869 1.21813 1.45851 1.53111 1.11783 1.26577 1.21069 0.99972 0.80858 0.94194 0.88571 1.21781 1.03390 0.93312 0.97662 1.21533 0.98055 0.97249 0.97934 1.22660 1.00964 0.78686 0.94945 0.89843 1.88362 1.22713 1.36275 1.81672 1.19575 0.79632 0.75526 0.75057 1.93265 1.89898 1.68693 1.63789 1.93288 1.95982 1.36069 1.86956 1.93263 1.73127 1.96037 1.53376 1.22160 1.04423 0.94046 0.97663 1.21874 0.98648 0.96412 0.99551 1.25561 1.02877 1.00900 0.96804 1.98446 1.73147 1.97040 1.25739 1.83388 1.46332 1.08462 1.11471 0.77224 0.85037 1.16007 1.15258 0.82550 0.76490 0.89677 0.90693 0.89715 0.89749 0.89825 0.90091 0.91301 0.90162 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 0.90 12.85 -35.23 -0.45 0.44 16 2 C -0.03 0.09 2.94 36.01 0.11 0.20 16 3 Si 0.65 -1.87 30.91 -169.99 -5.25 -7.12 16 4 C -0.23 0.52 5.68 -36.20 -0.21 0.32 16 5 C -0.07 0.14 9.71 -39.00 -0.38 -0.24 16 6 C -0.16 -0.08 5.98 -104.59 -0.63 -0.71 16 7 C 0.58 0.93 7.75 -12.69 -0.10 0.83 16 8 O -0.52 -2.58 14.57 5.23 0.08 -2.51 16 9 N -0.72 1.12 5.06 -55.00 -0.28 0.84 16 10 C 0.14 -0.23 2.45 -67.93 -0.17 -0.40 16 11 H 0.10 0.02 7.58 -51.93 -0.39 -0.37 16 12 C -0.12 0.45 5.39 -26.73 -0.14 0.31 16 13 C -0.11 0.29 5.57 -26.73 -0.15 0.14 16 14 C 0.08 -0.10 2.40 -26.73 -0.06 -0.17 16 15 H 0.08 -0.17 7.20 -51.93 -0.37 -0.54 16 16 O -0.37 -0.30 10.23 -35.23 -0.36 -0.67 16 17 C 0.59 0.68 3.71 101.05 0.37 1.06 16 18 F -0.17 -0.22 15.44 2.25 0.03 -0.19 16 19 F -0.14 -0.30 17.53 2.25 0.04 -0.26 16 20 F -0.18 -0.19 16.61 2.25 0.04 -0.15 16 21 C -0.14 0.14 5.39 -26.75 -0.14 -0.01 16 22 C -0.13 0.15 5.49 -26.75 -0.15 0.01 16 23 C -0.11 -0.12 6.87 30.01 0.21 0.08 16 24 Cl 0.03 0.07 27.20 -51.86 -1.41 -1.34 16 25 S 0.24 -0.36 20.17 -107.50 -2.17 -2.53 16 26 H 0.38 -1.62 8.70 45.56 0.40 -1.23 16 27 H 0.13 -0.54 7.96 -51.93 -0.41 -0.95 16 28 H -0.24 0.27 7.11 56.52 0.40 0.67 16 29 H -0.23 0.01 7.11 56.52 0.40 0.41 16 30 H 0.16 -0.63 7.10 -52.49 -0.37 -1.01 16 31 H 0.40 -1.62 7.15 -40.82 -0.29 -1.91 16 32 H 0.08 -0.35 8.14 -51.93 -0.42 -0.77 16 33 H 0.07 -0.35 8.14 -51.93 -0.42 -0.77 16 34 H 0.08 -0.18 8.14 -51.93 -0.42 -0.61 16 35 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 36 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 37 H 0.08 -0.03 6.50 -51.93 -0.34 -0.37 16 38 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 39 H 0.08 0.06 8.14 -51.93 -0.42 -0.36 16 LS Contribution 363.32 15.07 5.48 5.48 Total: 0.00 -6.44 363.32 -9.64 -16.08 By element: Atomic # 1 Polarization: -5.56 SS G_CDS: -3.94 Total: -9.50 kcal Atomic # 6 Polarization: 2.86 SS G_CDS: -1.44 Total: 1.42 kcal Atomic # 7 Polarization: 1.12 SS G_CDS: -0.28 Total: 0.84 kcal Atomic # 8 Polarization: -1.99 SS G_CDS: -0.74 Total: -2.73 kcal Atomic # 9 Polarization: -0.72 SS G_CDS: 0.11 Total: -0.60 kcal Atomic # 14 Polarization: -1.87 SS G_CDS: -5.25 Total: -7.12 kcal Atomic # 16 Polarization: -0.36 SS G_CDS: -2.17 Total: -2.53 kcal Atomic # 17 Polarization: 0.07 SS G_CDS: -1.41 Total: -1.34 kcal Total LS contribution 5.48 Total: 5.48 kcal Total: -6.44 -9.64 -16.08 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17849236_13431040.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -234.421 kcal (2) G-P(sol) polarization free energy of solvation -6.441 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -240.862 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.640 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.081 kcal (6) G-S(sol) free energy of system = (1) + (5) -250.501 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds