Wall clock time and date at job start Sun Mar 7 2021 15:02:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86301 * 109.47256 * 2 1 4 4 C 1.50699 * 109.46964 * 239.99985 * 2 1 3 5 5 C 1.32692 * 124.68716 * 299.72721 * 4 2 1 6 6 C 1.44500 * 113.10071 * 179.81792 * 5 4 2 7 7 C 1.47041 * 123.49447 * 180.23401 * 6 5 4 8 8 O 1.21659 * 120.00401 * 180.27414 * 7 6 5 9 9 N 1.34779 * 120.00022 * 0.27504 * 7 6 5 10 10 C 1.46500 * 119.99964 * 180.02562 * 9 7 6 11 11 H 1.08996 * 109.47331 * 34.99587 * 10 9 7 12 12 C 1.53003 * 109.46726 * 154.99901 * 10 9 7 13 13 C 1.53004 * 109.46743 * 179.97438 * 12 10 9 14 14 C 1.52999 * 109.47456 * 299.99971 * 13 12 10 15 15 H 1.09004 * 109.46859 * 300.00128 * 14 13 12 16 16 O 1.42892 * 109.47296 * 179.97438 * 14 13 12 17 17 C 1.42902 * 114.00201 * 150.00195 * 16 14 13 18 18 F 1.39900 * 109.47444 * 59.99962 * 17 16 14 19 19 F 1.39901 * 109.47498 * 180.02562 * 17 16 14 20 20 F 1.39905 * 109.46959 * 299.99720 * 17 16 14 21 21 C 1.53003 * 109.47125 * 59.99865 * 14 13 12 22 22 C 1.52999 * 109.46748 * 274.99391 * 10 9 7 23 23 C 1.36224 * 113.01745 * 0.45986 * 6 5 4 24 24 Cl 1.73605 * 124.61066 * 179.71927 * 23 6 5 25 25 S 1.70453 * 110.78612 * 359.75344 * 23 6 5 26 26 H 0.96698 * 113.99898 * 59.99565 * 1 2 3 27 27 H 1.09002 * 109.47259 * 120.00198 * 2 1 3 28 28 H 1.48504 * 110.00019 * 298.68426 * 3 2 1 29 29 H 1.48503 * 110.00152 * 60.00114 * 3 2 1 30 30 H 1.08001 * 123.44895 * 359.97438 * 5 4 2 31 31 H 0.96998 * 120.00093 * 359.97438 * 9 7 6 32 32 H 1.08991 * 109.47156 * 299.99184 * 12 10 9 33 33 H 1.08996 * 109.47472 * 59.99772 * 12 10 9 34 34 H 1.09004 * 109.47192 * 59.99896 * 13 12 10 35 35 H 1.08996 * 109.47187 * 179.97438 * 13 12 10 36 36 H 1.09004 * 109.47037 * 60.00373 * 21 14 13 37 37 H 1.08991 * 109.47203 * 179.97438 * 21 14 13 38 38 H 1.08996 * 109.47365 * 300.00176 * 22 10 9 39 39 H 1.09004 * 109.47216 * 60.00247 * 22 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 1.6729 -1.9771 -1.5295 6 6 2.2769 -2.4010 -2.7718 7 6 2.1337 -3.7568 -3.3227 8 8 2.6746 -4.0469 -4.3731 9 7 1.4033 -4.6782 -2.6639 10 6 1.2611 -6.0291 -3.2125 11 1 2.1864 -6.3183 -3.7106 12 6 0.9642 -7.0116 -2.0777 13 6 0.8151 -8.4224 -2.6507 14 6 -0.3357 -8.4446 -3.6587 15 1 -1.2609 -8.1552 -3.1602 16 8 -0.4746 -9.7621 -4.1942 17 6 -1.8109 -10.0977 -4.5732 18 9 -2.2559 -9.2046 -5.5537 19 9 -1.8383 -11.4007 -5.0817 20 9 -2.6471 -10.0166 -3.4544 21 6 -0.0389 -7.4621 -4.7934 22 6 0.1105 -6.0516 -4.2207 23 6 2.9968 -1.4158 -3.3775 24 17 3.8518 -1.5990 -4.8772 25 16 2.9449 0.0212 -2.4622 26 1 -0.3933 0.4418 -0.7650 27 1 1.7923 -0.5139 0.8900 28 1 1.5879 2.4586 -1.2242 29 1 1.5616 2.4679 1.2085 30 1 1.0705 -2.6243 -0.9091 31 1 0.9723 -4.4470 -1.8262 32 1 1.7839 -6.9956 -1.3595 33 1 0.0389 -6.7225 -1.5796 34 1 1.7403 -8.7118 -3.1492 35 1 0.6040 -9.1225 -1.8423 36 1 0.8863 -7.7515 -5.2918 37 1 -0.8584 -7.4782 -5.5117 38 1 -0.8148 -5.7625 -3.7225 39 1 0.3220 -5.3516 -5.0290 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17849236_13431040.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 15:02:49 Heat of formation + Delta-G solvation = -247.749015 kcal Electronic energy + Delta-G solvation = -31124.223397 eV Core-core repulsion = 25963.596098 eV Total energy + Delta-G solvation = -5160.627299 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 386.040 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -51.26823 -49.02265 -48.95113 -41.39372 -40.28239 -39.01182 -38.15208 -37.76709 -36.99312 -34.84529 -31.98669 -31.71460 -30.16374 -26.93588 -26.54809 -25.61388 -23.98161 -23.25458 -22.12006 -21.43566 -20.66827 -20.40131 -19.97836 -19.72710 -19.36742 -18.15256 -17.90618 -17.11232 -16.79757 -16.52497 -16.25257 -15.98282 -15.88758 -15.76704 -15.74473 -15.47696 -15.39527 -15.37762 -15.14750 -15.10245 -14.78113 -14.75998 -14.39991 -14.30847 -14.22778 -13.96007 -13.87522 -13.34382 -13.03118 -12.93261 -12.74233 -12.58564 -12.48033 -12.25647 -12.13723 -12.08184 -11.80307 -11.60553 -11.22696 -10.97929 -10.72544 -10.19262 -9.86602 -9.64649 -5.04825 -0.61726 -0.17639 0.49757 0.73678 0.79819 1.05824 1.19912 1.53892 1.90478 1.97916 2.16020 2.18948 2.93332 3.03185 3.25160 3.46901 3.49110 3.51019 3.78146 3.84061 3.88582 3.91304 3.97729 4.07501 4.23674 4.35233 4.38188 4.48807 4.56140 4.63003 4.74639 4.80519 4.95118 4.98799 5.02670 5.05191 5.07952 5.19419 5.35619 5.45071 6.42100 6.47060 7.16050 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.534 6.534 2 C -0.026 4.026 3 Si 0.701 3.299 4 C -0.225 4.225 5 C -0.067 4.067 6 C -0.166 4.166 7 C 0.571 3.429 8 O -0.558 6.558 9 N -0.704 5.704 10 C 0.144 3.856 11 H 0.073 0.927 12 C -0.113 4.113 13 C -0.107 4.107 14 C 0.079 3.921 15 H 0.097 0.903 16 O -0.375 6.375 17 C 0.596 3.404 18 F -0.176 7.176 19 F -0.150 7.150 20 F -0.174 7.174 21 C -0.141 4.141 22 C -0.119 4.119 23 C -0.140 4.140 24 Cl 0.001 6.999 25 S 0.259 5.741 26 H 0.390 0.610 27 H 0.152 0.848 28 H -0.261 1.261 29 H -0.270 1.270 30 H 0.183 0.817 31 H 0.415 0.585 32 H 0.096 0.904 33 H 0.095 0.905 34 H 0.076 0.924 35 H 0.094 0.906 36 H 0.071 0.929 37 H 0.074 0.926 38 H 0.083 0.917 39 H 0.055 0.945 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.095 3.258 7.151 7.859 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.138 4.138 3 Si 0.604 3.396 4 C -0.343 4.343 5 C -0.095 4.095 6 C -0.186 4.186 7 C 0.357 3.643 8 O -0.438 6.438 9 N -0.357 5.357 10 C 0.040 3.960 11 H 0.091 0.909 12 C -0.151 4.151 13 C -0.145 4.145 14 C 0.024 3.976 15 H 0.115 0.885 16 O -0.299 6.299 17 C 0.504 3.496 18 F -0.159 7.159 19 F -0.131 7.131 20 F -0.156 7.156 21 C -0.180 4.180 22 C -0.158 4.158 23 C -0.287 4.287 24 Cl 0.030 6.970 25 S 0.525 5.475 26 H 0.239 0.761 27 H 0.169 0.831 28 H -0.186 1.186 29 H -0.195 1.195 30 H 0.200 0.800 31 H 0.253 0.747 32 H 0.115 0.885 33 H 0.114 0.886 34 H 0.095 0.905 35 H 0.113 0.887 36 H 0.090 0.910 37 H 0.092 0.908 38 H 0.102 0.898 39 H 0.074 0.926 Dipole moment (debyes) X Y Z Total from point charges 0.985 4.875 6.598 8.262 hybrid contribution -1.942 -1.494 -0.860 2.596 sum -0.957 3.381 5.738 6.728 Atomic orbital electron populations 1.86621 1.17331 1.80056 1.50239 1.24448 0.83595 1.09632 0.96138 0.94568 0.90778 0.74188 0.80103 1.24871 1.07368 0.99082 1.02971 1.21140 0.99275 0.95388 0.93708 1.20352 1.05046 0.94840 0.98342 1.17686 0.78519 0.84299 0.83812 1.90869 1.48521 1.80652 1.23739 1.45726 1.52005 1.11253 1.26668 1.21043 0.98740 0.81283 0.94955 0.90877 1.21736 1.04848 0.91740 0.96753 1.21552 0.97058 0.98172 0.97749 1.22857 1.02174 0.77695 0.94902 0.88519 1.88374 1.22383 1.37280 1.81833 1.19560 0.79857 0.75192 0.75015 1.93261 1.89966 1.68701 1.63934 1.93267 1.96055 1.36679 1.87102 1.93262 1.73129 1.96008 1.53232 1.22098 1.03561 0.94470 0.97849 1.21784 0.99441 0.95560 0.98999 1.25823 1.03782 1.02518 0.96558 1.98428 1.73828 1.97266 1.27472 1.83321 1.46039 1.07131 1.11015 0.76052 0.83107 1.18612 1.19471 0.80007 0.74669 0.88544 0.88617 0.90516 0.88701 0.91002 0.90764 0.89804 0.92611 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 2.87 12.85 -148.98 -1.91 0.96 16 2 C -0.03 0.20 2.94 71.24 0.21 0.41 16 3 Si 0.70 -4.47 30.91 68.60 2.12 -2.35 16 4 C -0.23 1.37 5.68 24.51 0.14 1.51 16 5 C -0.07 0.37 9.71 22.70 0.22 0.59 16 6 C -0.17 -0.15 5.98 -19.84 -0.12 -0.27 16 7 C 0.57 2.19 7.75 86.55 0.67 2.87 16 8 O -0.56 -6.74 14.57 -4.22 -0.06 -6.80 16 9 N -0.70 2.58 5.06 -446.15 -2.26 0.33 16 10 C 0.14 -0.47 2.45 44.99 0.11 -0.36 16 11 H 0.07 0.14 7.58 -2.39 -0.02 0.12 16 12 C -0.11 1.01 5.39 30.60 0.16 1.17 16 13 C -0.11 0.65 5.57 30.60 0.17 0.82 16 14 C 0.08 -0.23 2.40 30.59 0.07 -0.15 16 15 H 0.10 -0.52 7.20 -2.38 -0.02 -0.54 16 16 O -0.37 -0.66 10.23 -148.98 -1.52 -2.18 16 17 C 0.60 1.43 3.71 113.37 0.42 1.85 16 18 F -0.18 -0.51 15.44 44.97 0.69 0.18 16 19 F -0.15 -0.70 17.53 44.97 0.79 0.09 16 20 F -0.17 -0.29 16.61 44.97 0.75 0.46 16 21 C -0.14 0.16 5.39 30.58 0.16 0.32 16 22 C -0.12 0.23 5.49 30.58 0.17 0.40 16 23 C -0.14 -0.39 6.87 67.35 0.46 0.07 16 24 Cl 0.00 0.01 27.20 -2.72 -0.07 -0.07 16 25 S 0.26 -0.85 20.17 -56.49 -1.14 -1.99 16 26 H 0.39 -3.94 8.70 -74.06 -0.64 -4.59 16 27 H 0.15 -1.68 7.96 -2.39 -0.02 -1.70 16 28 H -0.26 0.62 7.11 99.48 0.71 1.33 16 29 H -0.27 -0.11 7.11 99.48 0.71 0.60 16 30 H 0.18 -2.04 7.10 -2.91 -0.02 -2.06 16 31 H 0.42 -4.20 7.15 -92.71 -0.66 -4.87 16 32 H 0.10 -0.99 8.14 -2.39 -0.02 -1.01 16 33 H 0.10 -1.18 8.14 -2.39 -0.02 -1.20 16 34 H 0.08 -0.32 8.14 -2.38 -0.02 -0.34 16 35 H 0.09 -0.72 8.14 -2.39 -0.02 -0.74 16 36 H 0.07 0.08 8.14 -2.38 -0.02 0.06 16 37 H 0.07 0.02 6.50 -2.39 -0.02 0.00 16 38 H 0.08 -0.41 8.14 -2.39 -0.02 -0.43 16 39 H 0.06 0.19 8.14 -2.38 -0.02 0.17 16 Total: 0.00 -17.47 363.32 0.12 -17.35 By element: Atomic # 1 Polarization: -15.09 SS G_CDS: -0.12 Total: -15.21 kcal Atomic # 6 Polarization: 6.37 SS G_CDS: 2.86 Total: 9.23 kcal Atomic # 7 Polarization: 2.58 SS G_CDS: -2.26 Total: 0.33 kcal Atomic # 8 Polarization: -4.52 SS G_CDS: -3.50 Total: -8.02 kcal Atomic # 9 Polarization: -1.50 SS G_CDS: 2.23 Total: 0.73 kcal Atomic # 14 Polarization: -4.47 SS G_CDS: 2.12 Total: -2.35 kcal Atomic # 16 Polarization: -0.85 SS G_CDS: -1.14 Total: -1.99 kcal Atomic # 17 Polarization: 0.01 SS G_CDS: -0.07 Total: -0.07 kcal Total: -17.47 0.12 -17.35 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17849236_13431040.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -230.400 kcal (2) G-P(sol) polarization free energy of solvation -17.468 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -247.868 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.119 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.349 kcal (6) G-S(sol) free energy of system = (1) + (5) -247.749 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds