Wall clock time and date at job start Sun Mar 7 2021 15:03:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86306 * 109.47150 * 2 1 4 4 C 1.50700 * 109.47155 * 239.99983 * 2 1 3 5 5 C 1.31118 * 118.54399 * 119.99853 * 4 2 1 6 6 N 1.38933 * 121.84752 * 180.43158 * 5 4 2 7 7 C 1.47032 * 118.88079 * 346.68199 * 6 5 4 8 8 C 1.53542 * 107.71087 * 43.63341 * 7 6 5 9 9 C 1.50204 * 118.54689 * 300.02346 * 4 2 1 10 10 C 1.50698 * 109.33061 * 39.66289 * 9 4 2 11 11 O 1.21285 * 119.99674 * 119.99719 * 10 9 4 12 12 N 1.34774 * 120.00023 * 300.00188 * 10 9 4 13 13 C 1.46498 * 120.00027 * 180.02562 * 12 10 9 14 14 H 1.09001 * 109.46958 * 324.99822 * 13 12 10 15 15 C 1.52994 * 109.47229 * 84.99609 * 13 12 10 16 16 C 1.52997 * 109.47303 * 180.02562 * 15 13 12 17 17 C 1.53005 * 109.47147 * 300.00515 * 16 15 13 18 18 H 1.09001 * 109.46851 * 299.99718 * 17 16 15 19 19 O 1.42903 * 109.47406 * 180.02562 * 17 16 15 20 20 C 1.42900 * 113.99941 * 89.99508 * 19 17 16 21 21 F 1.39899 * 109.47322 * 60.00607 * 20 19 17 22 22 F 1.39904 * 109.46829 * 180.02562 * 20 19 17 23 23 F 1.39900 * 109.47261 * 300.00005 * 20 19 17 24 24 C 1.52994 * 109.47439 * 59.99569 * 17 16 15 25 25 C 1.52995 * 109.47265 * 205.00312 * 13 12 10 26 26 H 0.96695 * 113.99874 * 59.99977 * 1 2 3 27 27 H 1.09004 * 109.47287 * 120.00126 * 2 1 3 28 28 H 1.48498 * 109.99771 * 298.68303 * 3 2 1 29 29 H 1.48505 * 109.99911 * 60.00039 * 3 2 1 30 30 H 1.07995 * 119.07993 * 0.40616 * 5 4 2 31 31 H 0.96993 * 120.56089 * 166.66380 * 6 5 4 32 32 H 1.09002 * 109.82030 * 163.20634 * 7 6 5 33 33 H 1.08998 * 109.82172 * 284.06433 * 7 6 5 34 34 H 1.09004 * 109.62146 * 58.80244 * 8 7 6 35 35 H 1.09001 * 109.62186 * 179.35455 * 8 7 6 36 36 H 1.08994 * 109.32689 * 280.00692 * 9 4 2 37 37 H 0.96997 * 119.99654 * 0.02562 * 12 10 9 38 38 H 1.08995 * 109.47526 * 299.99970 * 15 13 12 39 39 H 1.09001 * 109.46977 * 60.00225 * 15 13 12 40 40 H 1.08996 * 109.47553 * 180.02562 * 16 15 13 41 41 H 1.08995 * 109.47317 * 59.99827 * 16 15 13 42 42 H 1.08995 * 109.47526 * 180.02562 * 24 17 16 43 43 H 1.09001 * 109.46977 * 60.00226 * 24 17 16 44 44 H 1.09001 * 109.46733 * 299.99648 * 25 13 12 45 45 H 1.08996 * 109.47624 * 59.99394 * 25 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 2.6832 -0.0459 -2.0745 6 7 3.1760 -0.6304 -3.2346 7 6 3.1006 -2.0915 -3.3809 8 6 1.7098 -2.5373 -2.9072 9 6 1.5482 -2.1481 -1.4359 10 6 0.1127 -2.3459 -1.0220 11 8 -0.7021 -2.7408 -1.8289 12 7 -0.2656 -2.0838 0.2447 13 6 -1.6609 -2.2765 0.6472 14 1 -2.3176 -2.0205 -0.1843 15 6 -1.8812 -3.7389 1.0394 16 6 -3.3386 -3.9403 1.4591 17 6 -3.6545 -3.0386 2.6542 18 1 -2.9982 -3.2945 3.4859 19 8 -5.0156 -3.2271 3.0466 20 6 -5.2023 -4.2555 4.0212 21 9 -4.4796 -3.9397 5.1767 22 9 -6.5618 -4.3593 4.3348 23 9 -4.7487 -5.4744 3.5058 24 6 -3.4342 -1.5762 2.2620 25 6 -1.9762 -1.3748 1.8423 26 1 -0.3933 0.4417 -0.7650 27 1 1.7924 -0.5139 0.8900 28 1 1.5879 2.4586 -1.2242 29 1 1.5615 2.4679 1.2085 30 1 2.9258 0.9848 -1.8623 31 1 3.5630 -0.0839 -3.9362 32 1 3.2406 -2.3660 -4.4264 33 1 3.8686 -2.5644 -2.7688 34 1 0.9437 -2.0403 -3.5024 35 1 1.6159 -3.6180 -3.0134 36 1 2.1904 -2.7833 -0.8259 37 1 0.3861 -1.7675 0.8898 38 1 -1.6567 -4.3812 0.1879 39 1 -1.2246 -3.9949 1.8709 40 1 -3.4955 -4.9820 1.7390 41 1 -3.9950 -3.6844 0.6275 42 1 -3.6588 -0.9339 3.1134 43 1 -4.0906 -1.3203 1.4302 44 1 -1.3196 -1.6309 2.6738 45 1 -1.8192 -0.3331 1.5629 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17849236_15608500.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 15:03:05 Heat of formation + Delta-G solvation = -235.930303 kcal Electronic energy + Delta-G solvation = -33411.877443 eV Core-core repulsion = 28402.361319 eV Total energy + Delta-G solvation = -5009.516123 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 351.149 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -51.12446 -48.86149 -48.81654 -41.64065 -40.44083 -39.16186 -37.97173 -37.55936 -34.45823 -33.45573 -32.83610 -31.96267 -29.93799 -27.33379 -26.37630 -25.69729 -23.96902 -23.49313 -23.14838 -21.43439 -21.29075 -20.32849 -19.84288 -19.63170 -19.44760 -18.93535 -17.99974 -17.51588 -17.19599 -16.67974 -16.31519 -16.16900 -16.05350 -15.71805 -15.58186 -15.46690 -15.32928 -15.23134 -15.17410 -15.01429 -14.94144 -14.85881 -14.59127 -14.45683 -14.20751 -13.97519 -13.82535 -13.67552 -13.32827 -13.24946 -12.84430 -12.78340 -12.60881 -12.26152 -12.23092 -12.03749 -11.94879 -11.74376 -11.54508 -11.46319 -11.16143 -10.55429 -10.49640 -9.44135 -8.57529 -4.98095 0.90392 1.14860 1.33436 1.54953 1.91556 2.00694 2.09463 2.41539 2.48756 3.05532 3.14991 3.35553 3.49308 3.55166 3.62234 3.73214 3.83843 3.89380 3.94797 4.06036 4.10004 4.18997 4.22341 4.29532 4.33758 4.34626 4.46967 4.53080 4.54881 4.67721 4.70205 4.77286 4.77930 4.94739 5.02474 5.06474 5.14163 5.17891 5.26466 5.27429 5.33805 5.38149 5.76077 6.17000 6.39972 6.70630 6.82164 7.54607 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.521 6.521 2 C -0.058 4.058 3 Si 0.660 3.340 4 C -0.283 4.283 5 C 0.158 3.842 6 N -0.747 5.747 7 C 0.119 3.881 8 C -0.120 4.120 9 C -0.039 4.039 10 C 0.530 3.470 11 O -0.552 6.552 12 N -0.687 5.687 13 C 0.150 3.850 14 H 0.087 0.913 15 C -0.127 4.127 16 C -0.143 4.143 17 C 0.084 3.916 18 H 0.082 0.918 19 O -0.367 6.367 20 C 0.594 3.406 21 F -0.176 7.176 22 F -0.142 7.142 23 F -0.175 7.175 24 C -0.111 4.111 25 C -0.117 4.117 26 H 0.367 0.633 27 H 0.108 0.892 28 H -0.265 1.265 29 H -0.261 1.261 30 H 0.133 0.867 31 H 0.403 0.597 32 H 0.082 0.918 33 H 0.063 0.937 34 H 0.078 0.922 35 H 0.079 0.921 36 H 0.093 0.907 37 H 0.401 0.599 38 H 0.076 0.924 39 H 0.065 0.935 40 H 0.078 0.922 41 H 0.081 0.919 42 H 0.080 0.920 43 H 0.081 0.919 44 H 0.068 0.932 45 H 0.090 0.910 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.586 2.212 -0.590 7.924 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.327 6.327 2 C -0.169 4.169 3 Si 0.563 3.437 4 C -0.294 4.294 5 C 0.035 3.965 6 N -0.377 5.377 7 C -0.005 4.005 8 C -0.158 4.158 9 C -0.061 4.061 10 C 0.316 3.684 11 O -0.430 6.430 12 N -0.340 5.340 13 C 0.045 3.955 14 H 0.105 0.895 15 C -0.166 4.166 16 C -0.182 4.182 17 C 0.028 3.972 18 H 0.100 0.900 19 O -0.291 6.291 20 C 0.502 3.498 21 F -0.158 7.158 22 F -0.124 7.124 23 F -0.157 7.157 24 C -0.149 4.149 25 C -0.155 4.155 26 H 0.216 0.784 27 H 0.126 0.874 28 H -0.191 1.191 29 H -0.186 1.186 30 H 0.149 0.851 31 H 0.238 0.762 32 H 0.100 0.900 33 H 0.081 0.919 34 H 0.097 0.903 35 H 0.098 0.902 36 H 0.111 0.889 37 H 0.239 0.761 38 H 0.095 0.905 39 H 0.084 0.916 40 H 0.097 0.903 41 H 0.100 0.900 42 H 0.098 0.902 43 H 0.100 0.900 44 H 0.086 0.914 45 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges 6.737 2.404 -0.653 7.183 hybrid contribution -0.607 -0.018 -0.154 0.626 sum 6.130 2.387 -0.807 6.628 Atomic orbital electron populations 1.86916 1.17720 1.78229 1.49860 1.24605 0.84380 1.09581 0.98311 0.95451 0.92827 0.75463 0.80003 1.20523 1.09922 0.96805 1.02106 1.20392 0.92726 0.96460 0.86885 1.44612 1.67369 1.06836 1.18847 1.21661 0.96811 0.80456 1.01620 1.21715 0.97331 1.02109 0.94674 1.19663 0.93730 0.94693 0.97965 1.20306 0.90058 0.76120 0.81875 1.90699 1.53960 1.46778 1.51538 1.46011 1.10343 1.66015 1.11660 1.20840 0.83910 0.93551 0.97230 0.89491 1.21914 0.95179 0.97581 1.01952 1.22151 0.97754 1.00165 0.98099 1.22681 0.78603 0.98176 0.97718 0.89982 1.88365 1.31818 1.52342 1.56599 1.19581 0.74985 0.77708 0.77546 1.93259 1.78436 1.92595 1.51535 1.93283 1.31036 1.95664 1.92394 1.93262 1.89114 1.46608 1.86700 1.21584 0.97494 0.92775 1.03018 1.21740 0.94773 1.01516 0.97474 0.78401 0.87406 1.19078 1.18588 0.85058 0.76232 0.89962 0.91866 0.90286 0.90205 0.88915 0.76055 0.90506 0.91588 0.90337 0.90043 0.90157 0.90036 0.91362 0.89110 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 0.96 6.66 -35.23 -0.23 0.72 16 2 C -0.06 0.17 1.83 36.01 0.07 0.23 16 3 Si 0.66 -1.64 29.68 -169.99 -5.05 -6.68 16 4 C -0.28 0.55 5.26 -101.34 -0.53 0.02 16 5 C 0.16 -0.37 9.63 -16.08 -0.15 -0.53 16 6 N -0.75 2.00 5.83 -60.68 -0.35 1.65 16 7 C 0.12 -0.30 7.15 -3.47 -0.02 -0.33 16 8 C -0.12 0.05 4.92 -26.43 -0.13 -0.09 16 9 C -0.04 0.03 2.74 -93.14 -0.26 -0.23 16 10 C 0.53 0.74 6.25 -10.99 -0.07 0.67 16 11 O -0.55 -3.03 15.46 5.55 0.09 -2.95 16 12 N -0.69 0.54 2.58 -53.81 -0.14 0.41 16 13 C 0.15 -0.06 2.23 -67.94 -0.15 -0.21 16 14 H 0.09 0.16 7.58 -51.93 -0.39 -0.24 16 15 C -0.13 0.02 5.49 -26.74 -0.15 -0.13 16 16 C -0.14 -0.02 5.39 -26.73 -0.14 -0.16 16 17 C 0.08 -0.01 2.40 -26.73 -0.06 -0.07 16 18 H 0.08 -0.07 7.20 -51.93 -0.37 -0.44 16 19 O -0.37 -0.66 10.24 -35.23 -0.36 -1.02 16 20 C 0.59 1.12 3.71 101.05 0.37 1.49 16 21 F -0.18 -0.32 16.61 2.25 0.04 -0.28 16 22 F -0.14 -0.39 17.53 2.25 0.04 -0.35 16 23 F -0.17 -0.34 15.44 2.25 0.03 -0.30 16 24 C -0.11 0.12 5.58 -26.71 -0.15 -0.02 16 25 C -0.12 0.22 5.15 -26.71 -0.14 0.08 16 26 H 0.37 -0.72 8.70 45.56 0.40 -0.33 16 27 H 0.11 -0.46 7.07 -51.93 -0.37 -0.83 16 28 H -0.27 -0.07 7.10 56.52 0.40 0.33 16 29 H -0.26 -0.33 7.11 56.52 0.40 0.07 16 30 H 0.13 -0.50 4.37 -52.49 -0.23 -0.73 16 31 H 0.40 -1.72 8.96 -40.82 -0.37 -2.09 16 32 H 0.08 -0.29 8.14 -51.93 -0.42 -0.72 16 33 H 0.06 -0.19 8.14 -51.93 -0.42 -0.61 16 34 H 0.08 0.16 7.75 -51.93 -0.40 -0.24 16 35 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 36 H 0.09 -0.17 8.14 -51.93 -0.42 -0.59 16 37 H 0.40 -0.90 5.70 -40.82 -0.23 -1.13 16 38 H 0.08 0.13 8.14 -51.93 -0.42 -0.29 16 39 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 40 H 0.08 0.04 6.50 -51.93 -0.34 -0.30 16 41 H 0.08 0.07 8.14 -51.93 -0.42 -0.36 16 42 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 43 H 0.08 -0.05 8.14 -51.93 -0.42 -0.48 16 44 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 45 H 0.09 -0.14 7.07 -51.93 -0.37 -0.51 16 LS Contribution 354.28 15.07 5.34 5.34 Total: 0.00 -6.03 354.28 -8.21 -14.24 By element: Atomic # 1 Polarization: -5.42 SS G_CDS: -6.10 Total: -11.51 kcal Atomic # 6 Polarization: 2.26 SS G_CDS: -1.52 Total: 0.74 kcal Atomic # 7 Polarization: 2.55 SS G_CDS: -0.49 Total: 2.06 kcal Atomic # 8 Polarization: -2.73 SS G_CDS: -0.51 Total: -3.24 kcal Atomic # 9 Polarization: -1.05 SS G_CDS: 0.11 Total: -0.93 kcal Atomic # 14 Polarization: -1.64 SS G_CDS: -5.05 Total: -6.68 kcal Total LS contribution 5.34 Total: 5.34 kcal Total: -6.03 -8.21 -14.24 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17849236_15608500.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -221.692 kcal (2) G-P(sol) polarization free energy of solvation -6.025 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -227.717 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.213 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.238 kcal (6) G-S(sol) free energy of system = (1) + (5) -235.930 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds