Wall clock time and date at job start Sun Mar 7 2021 15:04:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42891 * 1 3 3 C 1.35905 * 117.00240 * 2 1 4 4 C 1.38604 * 120.02972 * 179.72511 * 3 2 1 5 5 C 1.38653 * 119.89091 * 179.81583 * 4 3 2 6 6 O 1.35900 * 120.02822 * 180.18335 * 5 4 3 7 7 C 1.42898 * 117.00075 * 0.27684 * 6 5 4 8 8 C 1.50697 * 109.47064 * 179.97438 * 7 6 5 9 9 O 1.21283 * 120.00169 * 0.02562 * 8 7 6 10 10 N 1.34777 * 119.99884 * 180.02562 * 8 7 6 11 11 C 1.46504 * 119.99988 * 180.02562 * 10 8 7 12 12 H 1.08999 * 109.47003 * 325.00264 * 11 10 8 13 13 C 1.53000 * 109.47044 * 85.00133 * 11 10 8 14 14 C 1.52997 * 109.47091 * 180.02562 * 13 11 10 15 15 C 1.52999 * 109.47137 * 300.00165 * 14 13 11 16 16 H 1.08999 * 109.47119 * 299.99867 * 15 14 13 17 17 O 1.42898 * 109.47273 * 180.02562 * 15 14 13 18 18 C 1.42901 * 114.00185 * 89.99750 * 17 15 14 19 19 F 1.39896 * 109.47277 * 60.00419 * 18 17 15 20 20 F 1.39905 * 109.47128 * 180.02562 * 18 17 15 21 21 F 1.39902 * 109.46975 * 300.00028 * 18 17 15 22 22 C 1.53000 * 109.47265 * 59.99942 * 15 14 13 23 23 C 1.52997 * 109.47091 * 300.00086 * 22 15 14 24 24 C 1.38752 * 119.94536 * 0.46093 * 5 4 3 25 25 C 1.50700 * 119.97597 * 179.74584 * 24 5 4 26 26 O 1.42896 * 109.47109 * 285.02333 * 25 24 5 27 27 Si 1.86297 * 109.47225 * 165.02205 * 25 24 5 28 28 C 1.38195 * 120.05228 * 359.76936 * 24 5 4 29 29 C 1.38153 * 120.11050 * 0.02562 * 28 24 5 30 30 H 1.08996 * 109.47672 * 59.99762 * 1 2 3 31 31 H 1.09006 * 109.47331 * 179.97438 * 1 2 3 32 32 H 1.09002 * 109.47220 * 299.99819 * 1 2 3 33 33 H 1.08001 * 120.05692 * 0.02562 * 4 3 2 34 34 H 1.09001 * 109.47231 * 300.00096 * 7 6 5 35 35 H 1.09001 * 109.46715 * 59.99957 * 7 6 5 36 36 H 0.96996 * 120.00165 * 0.02562 * 10 8 7 37 37 H 1.09001 * 109.47038 * 300.00059 * 13 11 10 38 38 H 1.08999 * 109.47113 * 60.00199 * 13 11 10 39 39 H 1.09003 * 109.47143 * 180.02562 * 14 13 11 40 40 H 1.08999 * 109.47008 * 60.00101 * 14 13 11 41 41 H 1.09001 * 109.47038 * 180.02562 * 22 15 14 42 42 H 1.08997 * 109.47025 * 60.00459 * 22 15 14 43 43 H 1.08999 * 109.47008 * 299.99899 * 23 22 15 44 44 H 1.09004 * 109.47024 * 180.02562 * 23 22 15 45 45 H 1.08999 * 109.46817 * 45.02288 * 25 24 5 46 46 H 0.96696 * 114.00611 * 299.99750 * 26 25 24 47 47 H 1.48501 * 109.99861 * 58.68486 * 27 25 24 48 48 H 1.48504 * 110.00059 * 179.97438 * 27 25 24 49 49 H 1.08003 * 119.94855 * 179.97438 * 28 24 5 50 50 H 1.07999 * 119.97289 * 179.97438 * 29 28 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 3.4300 1.2841 0.0058 5 6 4.0566 2.5210 0.0019 6 8 5.4135 2.5960 0.0037 7 6 6.1316 1.3605 0.0036 8 6 7.6124 1.6402 0.0052 9 8 8.0134 2.7848 0.0068 10 7 8.4911 0.6183 0.0048 11 6 9.9307 0.8901 0.0069 12 1 10.1322 1.7856 -0.5810 13 6 10.4068 1.1063 1.4448 14 6 11.9101 1.3908 1.4469 15 6 12.6550 0.2020 0.8363 16 1 12.4539 -0.6936 1.4241 17 8 14.0591 0.4675 0.8388 18 6 14.7310 0.0313 2.0222 19 9 14.5721 -1.3511 2.1659 20 9 16.0928 0.3370 1.9248 21 9 14.1859 0.6816 3.1345 22 6 12.1789 -0.0141 -0.6016 23 6 10.6756 -0.2986 -0.6038 24 6 3.2970 3.6822 0.0019 25 6 3.9773 5.0269 0.0035 26 8 4.5027 5.2934 1.3054 27 14 2.7441 6.3473 -0.4508 28 6 1.9172 3.6065 0.0010 29 6 1.2905 2.3753 0.0006 30 1 -0.3634 0.5138 -0.8899 31 1 -0.3634 -1.0277 -0.0005 32 1 -0.3634 0.5138 0.8900 33 1 4.0196 0.3792 0.0098 34 1 5.8687 0.7874 0.8927 35 1 5.8710 0.7890 -0.8873 36 1 8.1705 -0.2971 0.0031 37 1 9.8764 1.9534 1.8796 38 1 10.2053 0.2108 2.0327 39 1 12.2494 1.5443 2.4714 40 1 12.1112 2.2864 0.8591 41 1 12.7093 -0.8613 -1.0365 42 1 12.3801 0.8815 -1.1894 43 1 10.4746 -1.1942 -0.0160 44 1 10.3366 -0.4530 -1.6281 45 1 4.7902 5.0236 -0.7227 46 1 3.8338 5.3113 2.0034 47 1 1.6148 6.3408 0.5136 48 1 3.4024 7.6784 -0.4522 49 1 1.3276 4.5114 0.0015 50 1 0.2120 2.3187 0.0003 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17849236_4974312.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 15:04:13 Heat of formation + Delta-G solvation = -318.658816 kcal Electronic energy + Delta-G solvation = -38899.323513 eV Core-core repulsion = 33057.829259 eV Total energy + Delta-G solvation = -5841.494255 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 406.153 amu Computer time = 1.57 seconds Orbital eigenvalues (eV) -51.28015 -49.03374 -48.96340 -41.86244 -41.23060 -40.33248 -39.75941 -38.46461 -37.86430 -37.00107 -34.97853 -32.31772 -32.00942 -31.61235 -30.61281 -28.78164 -28.31129 -26.34618 -26.13430 -24.18139 -23.94229 -23.18933 -22.49381 -21.65956 -21.31292 -20.45247 -19.99139 -19.96786 -19.74155 -18.64905 -18.15818 -17.86877 -17.52892 -17.42988 -17.05996 -16.70177 -16.65586 -16.48586 -16.21004 -16.02437 -15.83574 -15.75478 -15.62373 -15.47827 -15.39031 -15.26119 -15.18305 -15.15047 -15.09036 -14.73754 -14.63513 -14.50192 -14.32633 -13.94286 -13.75711 -13.49679 -13.36834 -13.33876 -13.16248 -13.01189 -12.80050 -12.47389 -12.30639 -12.28095 -12.14108 -12.03240 -11.65984 -11.63231 -11.63009 -11.26363 -11.00239 -10.51925 -10.20941 -9.70209 -9.10566 -4.93464 0.19957 0.30638 0.78330 1.31418 1.41955 1.43795 1.55232 1.96021 1.99518 2.24953 2.55552 2.58095 2.92036 3.01924 3.43588 3.48409 3.49175 3.52346 3.72067 3.79921 3.80216 3.85440 3.90999 3.96500 4.03584 4.06428 4.07081 4.17170 4.20874 4.33141 4.34722 4.39833 4.42638 4.43030 4.47291 4.60500 4.65941 4.72485 4.79436 4.92295 5.00201 5.01941 5.02464 5.04738 5.16310 5.23457 5.27781 5.32614 5.39229 5.47385 6.13344 6.35852 6.44963 6.56772 7.11893 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.016 3.984 2 O -0.330 6.330 3 C 0.165 3.835 4 C -0.251 4.251 5 C 0.177 3.823 6 O -0.303 6.303 7 C 0.034 3.966 8 C 0.514 3.486 9 O -0.567 6.567 10 N -0.705 5.705 11 C 0.143 3.857 12 H 0.069 0.931 13 C -0.121 4.121 14 C -0.143 4.143 15 C 0.079 3.921 16 H 0.099 0.901 17 O -0.375 6.375 18 C 0.596 3.404 19 F -0.173 7.173 20 F -0.149 7.149 21 F -0.177 7.177 22 C -0.108 4.108 23 C -0.112 4.112 24 C -0.196 4.196 25 C -0.077 4.077 26 O -0.550 6.550 27 Si 0.780 3.220 28 C -0.041 4.041 29 C -0.238 4.238 30 H 0.070 0.930 31 H 0.117 0.883 32 H 0.066 0.934 33 H 0.155 0.845 34 H 0.119 0.881 35 H 0.126 0.874 36 H 0.422 0.578 37 H 0.052 0.948 38 H 0.088 0.912 39 H 0.074 0.926 40 H 0.069 0.931 41 H 0.096 0.904 42 H 0.075 0.925 43 H 0.099 0.901 44 H 0.098 0.902 45 H 0.098 0.902 46 H 0.381 0.619 47 H -0.263 1.263 48 H -0.309 1.309 49 H 0.155 0.845 50 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.669 -8.304 -2.990 11.693 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 O -0.243 6.243 3 C 0.118 3.882 4 C -0.270 4.270 5 C 0.131 3.869 6 O -0.215 6.215 7 C -0.044 4.044 8 C 0.300 3.700 9 O -0.444 6.444 10 N -0.359 5.359 11 C 0.039 3.961 12 H 0.087 0.913 13 C -0.160 4.160 14 C -0.181 4.181 15 C 0.024 3.976 16 H 0.117 0.883 17 O -0.299 6.299 18 C 0.504 3.496 19 F -0.156 7.156 20 F -0.131 7.131 21 F -0.159 7.159 22 C -0.146 4.146 23 C -0.149 4.149 24 C -0.197 4.197 25 C -0.185 4.185 26 O -0.357 6.357 27 Si 0.684 3.316 28 C -0.059 4.059 29 C -0.257 4.257 30 H 0.089 0.911 31 H 0.135 0.865 32 H 0.085 0.915 33 H 0.172 0.828 34 H 0.137 0.863 35 H 0.143 0.857 36 H 0.260 0.740 37 H 0.071 0.929 38 H 0.106 0.894 39 H 0.093 0.907 40 H 0.088 0.912 41 H 0.115 0.885 42 H 0.093 0.907 43 H 0.117 0.883 44 H 0.116 0.884 45 H 0.116 0.884 46 H 0.230 0.770 47 H -0.189 1.189 48 H -0.237 1.237 49 H 0.172 0.828 50 H 0.174 0.826 Dipole moment (debyes) X Y Z Total from point charges -6.926 -6.727 -3.193 10.170 hybrid contribution 0.297 -0.429 1.731 1.808 sum -6.629 -7.156 -1.462 9.863 Atomic orbital electron populations 1.23401 0.76023 1.05715 1.02669 1.86053 1.23732 1.26564 1.87926 1.18872 0.91684 0.84945 0.92661 1.20554 0.93373 0.97431 1.15666 1.18576 0.81745 0.93143 0.93434 1.86224 1.15482 1.31734 1.88100 1.22759 0.88509 0.86470 1.06674 1.20465 0.88508 0.85258 0.75758 1.90789 1.80689 1.23274 1.49693 1.45684 1.05667 1.09640 1.74888 1.21051 0.79018 0.99827 0.96248 0.91278 1.21807 0.94055 1.02823 0.97269 1.22114 0.95340 0.98496 1.02164 1.22858 0.74815 0.99026 1.00903 0.88341 1.88375 1.25570 1.80850 1.35134 1.19555 0.77028 0.74622 0.78402 1.93260 1.95332 1.31365 1.95599 1.93268 1.30709 1.93179 1.95943 1.93262 1.85767 1.81622 1.55243 1.21565 0.95954 1.04408 0.92715 1.21734 0.92367 0.97286 1.03545 1.19598 0.93503 0.93964 1.12629 1.25142 1.06253 0.99761 0.87308 1.86649 1.38550 1.93090 1.17432 0.94131 0.75466 0.73386 0.88598 1.20942 0.92033 0.98804 0.94126 1.21397 1.01605 0.91268 1.11407 0.91115 0.86523 0.91527 0.82784 0.86308 0.85689 0.73970 0.92919 0.89363 0.90734 0.91202 0.88544 0.90657 0.88272 0.88392 0.88436 0.77036 1.18867 1.23742 0.82775 0.82575 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.11 9.81 113.37 1.11 1.00 16 2 O -0.33 0.00 10.49 -92.48 -0.97 -0.97 16 3 C 0.16 0.16 6.68 22.49 0.15 0.31 16 4 C -0.25 -0.33 8.97 22.46 0.20 -0.13 16 5 C 0.18 0.86 6.66 22.49 0.15 1.01 16 6 O -0.30 -2.30 9.00 -73.39 -0.66 -2.96 16 7 C 0.03 -0.05 5.22 71.23 0.37 0.32 16 8 C 0.51 1.62 7.87 87.66 0.69 2.31 16 9 O -0.57 -8.61 16.16 16.00 0.26 -8.35 16 10 N -0.70 3.61 5.08 -442.53 -2.25 1.36 16 11 C 0.14 -0.47 2.45 44.99 0.11 -0.36 16 12 H 0.07 0.19 7.58 -2.39 -0.02 0.17 16 13 C -0.12 0.19 5.49 30.59 0.17 0.36 16 14 C -0.14 0.07 5.39 30.59 0.17 0.23 16 15 C 0.08 -0.21 2.40 30.59 0.07 -0.14 16 16 H 0.10 -0.54 7.20 -2.39 -0.02 -0.56 16 17 O -0.38 -0.77 10.24 -148.98 -1.53 -2.30 16 18 C 0.60 1.56 3.71 113.37 0.42 1.98 16 19 F -0.17 -0.29 16.61 44.97 0.75 0.46 16 20 F -0.15 -0.74 17.53 44.97 0.79 0.05 16 21 F -0.18 -0.57 15.44 44.97 0.69 0.12 16 22 C -0.11 0.66 5.57 30.59 0.17 0.83 16 23 C -0.11 1.05 5.39 30.59 0.16 1.21 16 24 C -0.20 -0.77 5.27 -19.75 -0.10 -0.88 16 25 C -0.08 -0.45 2.37 71.24 0.17 -0.28 16 26 O -0.55 -5.44 12.88 -148.98 -1.92 -7.36 16 27 Si 0.78 0.50 30.24 68.60 2.07 2.58 16 28 C -0.04 0.02 8.65 22.24 0.19 0.21 16 29 C -0.24 0.34 9.04 22.38 0.20 0.54 16 30 H 0.07 -0.64 7.66 -2.39 -0.02 -0.66 16 31 H 0.12 -1.16 8.14 -2.38 -0.02 -1.18 16 32 H 0.07 -0.56 7.66 -2.39 -0.02 -0.58 16 33 H 0.15 -0.52 6.30 -2.91 -0.02 -0.54 16 34 H 0.12 -0.80 7.65 -2.39 -0.02 -0.82 16 35 H 0.13 -0.98 7.67 -2.39 -0.02 -1.00 16 36 H 0.42 -5.53 8.60 -92.71 -0.80 -6.33 16 37 H 0.05 0.23 8.14 -2.39 -0.02 0.22 16 38 H 0.09 -0.47 8.14 -2.39 -0.02 -0.49 16 39 H 0.07 0.06 6.50 -2.39 -0.02 0.05 16 40 H 0.07 0.15 8.14 -2.39 -0.02 0.13 16 41 H 0.10 -0.75 8.14 -2.39 -0.02 -0.77 16 42 H 0.07 -0.29 8.14 -2.39 -0.02 -0.31 16 43 H 0.10 -1.32 8.14 -2.39 -0.02 -1.34 16 44 H 0.10 -1.08 8.14 -2.39 -0.02 -1.10 16 45 H 0.10 0.87 7.83 -2.39 -0.02 0.86 16 46 H 0.38 0.92 8.70 -74.06 -0.64 0.28 16 47 H -0.26 -0.24 6.68 99.48 0.66 0.43 16 48 H -0.31 -2.84 7.11 99.48 0.71 -2.13 16 49 H 0.16 -0.70 4.85 -2.91 -0.01 -0.71 16 50 H 0.16 -1.02 6.29 -2.91 -0.02 -1.04 16 Total: 0.00 -27.49 418.05 1.23 -26.26 By element: Atomic # 1 Polarization: -17.02 SS G_CDS: -0.42 Total: -17.44 kcal Atomic # 6 Polarization: 4.14 SS G_CDS: 4.41 Total: 8.54 kcal Atomic # 7 Polarization: 3.61 SS G_CDS: -2.25 Total: 1.36 kcal Atomic # 8 Polarization: -17.12 SS G_CDS: -4.82 Total: -21.94 kcal Atomic # 9 Polarization: -1.60 SS G_CDS: 2.23 Total: 0.63 kcal Atomic # 14 Polarization: 0.50 SS G_CDS: 2.07 Total: 2.58 kcal Total: -27.49 1.23 -26.26 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17849236_4974312.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -292.402 kcal (2) G-P(sol) polarization free energy of solvation -27.487 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -319.890 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.231 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.256 kcal (6) G-S(sol) free energy of system = (1) + (5) -318.659 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.57 seconds