Wall clock time and date at job start Sun Mar 7 2021 15:04:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42892 * 1 3 3 C 1.35997 * 117.00533 * 2 1 4 4 C 1.39150 * 120.08068 * 180.02562 * 3 2 1 5 5 O 1.35997 * 120.06802 * 359.95896 * 4 3 2 6 6 C 1.42897 * 116.99662 * 179.97438 * 5 4 3 7 7 C 1.50701 * 109.47137 * 180.02562 * 6 5 4 8 8 O 1.21286 * 120.00016 * 359.97438 * 7 6 5 9 9 N 1.34780 * 120.00113 * 179.97438 * 7 6 5 10 10 C 1.46503 * 120.00076 * 179.97438 * 9 7 6 11 11 H 1.09002 * 109.46593 * 35.00196 * 10 9 7 12 12 C 1.52995 * 109.46850 * 155.00321 * 10 9 7 13 13 C 1.53001 * 109.46783 * 180.02562 * 12 10 9 14 14 C 1.53003 * 109.47147 * 299.99703 * 13 12 10 15 15 H 1.08995 * 109.46880 * 300.00283 * 14 13 12 16 16 O 1.42901 * 109.46846 * 179.97438 * 14 13 12 17 17 C 1.42908 * 113.99491 * 150.00238 * 16 14 13 18 18 F 1.39900 * 109.47114 * 60.00010 * 17 16 14 19 19 F 1.39900 * 109.46918 * 179.97438 * 17 16 14 20 20 F 1.39908 * 109.46798 * 299.99750 * 17 16 14 21 21 C 1.52996 * 109.46780 * 60.00168 * 14 13 12 22 22 C 1.52997 * 109.47034 * 275.00157 * 10 9 7 23 23 C 1.38558 * 119.85597 * 179.97438 * 4 3 2 24 24 C 1.38241 * 120.00008 * 359.75095 * 23 4 3 25 25 C 1.38259 * 120.14653 * 0.50643 * 24 23 4 26 26 C 1.50699 * 119.92736 * 179.76826 * 25 24 23 27 27 O 1.42892 * 109.47249 * 119.72467 * 26 25 24 28 28 Si 1.86298 * 109.47032 * 359.71853 * 26 25 24 29 29 C 1.38242 * 120.14200 * 359.49077 * 25 24 23 30 30 H 1.08994 * 109.47438 * 299.99969 * 1 2 3 31 31 H 1.09000 * 109.47102 * 59.99854 * 1 2 3 32 32 H 1.09004 * 109.46864 * 179.97438 * 1 2 3 33 33 H 1.09004 * 109.47389 * 300.00010 * 6 5 4 34 34 H 1.09003 * 109.47261 * 59.99666 * 6 5 4 35 35 H 0.97002 * 119.99952 * 0.02562 * 9 7 6 36 36 H 1.09002 * 109.47114 * 299.99720 * 12 10 9 37 37 H 1.08993 * 109.47537 * 60.00404 * 12 10 9 38 38 H 1.09005 * 109.47334 * 59.99601 * 13 12 10 39 39 H 1.09007 * 109.47222 * 179.97438 * 13 12 10 40 40 H 1.08995 * 109.47320 * 60.00385 * 21 14 13 41 41 H 1.09002 * 109.46857 * 180.02562 * 21 14 13 42 42 H 1.08993 * 109.47423 * 299.99638 * 22 10 9 43 43 H 1.09006 * 109.47459 * 60.00263 * 22 10 9 44 44 H 1.08002 * 119.99992 * 179.97438 * 23 4 3 45 45 H 1.08000 * 119.92937 * 180.24438 * 24 23 4 46 46 H 1.09004 * 109.46453 * 239.72536 * 26 25 24 47 47 H 0.96703 * 114.00176 * 299.99748 * 27 26 25 48 48 H 1.48506 * 109.99834 * 58.68765 * 28 26 25 49 49 H 1.48502 * 110.00011 * 180.02562 * 28 26 25 50 50 H 1.08001 * 119.99712 * 180.23635 * 29 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4359 1.2863 -0.0005 5 8 4.1795 0.1476 -0.0002 6 6 5.6002 0.3006 -0.0014 7 6 6.2518 -1.0582 -0.0015 8 8 5.5669 -2.0592 -0.0002 9 7 7.5957 -1.1612 -0.0030 10 6 8.2291 -2.4822 -0.0025 11 1 7.6264 -3.1743 -0.5906 12 6 9.6277 -2.3774 -0.6139 13 6 10.2890 -3.7571 -0.6139 14 6 10.3978 -4.2706 0.8232 15 1 11.0006 -3.5788 1.4115 16 8 11.0149 -5.5595 0.8230 17 6 11.7651 -5.8448 2.0054 18 9 10.9192 -5.7922 3.1185 19 9 12.3246 -7.1231 1.9055 20 9 12.7855 -4.8985 2.1499 21 6 8.9992 -4.3754 1.4346 22 6 8.3380 -2.9951 1.4348 23 6 4.0603 2.5233 -0.0011 24 6 3.3029 3.6798 -0.0063 25 6 1.9223 3.6057 -0.0004 26 6 1.1016 4.8696 -0.0008 27 8 0.2771 4.9018 -1.1675 28 14 2.2365 6.3470 -0.0013 29 6 1.2932 2.3748 0.0001 30 1 -0.3634 0.5138 0.8899 31 1 -0.3633 0.5139 -0.8900 32 1 -0.3633 -1.0277 -0.0005 33 1 5.9059 0.8498 -0.8920 34 1 5.9072 0.8512 0.8879 35 1 8.1435 -0.3607 -0.0037 36 1 9.5501 -2.0120 -1.6379 37 1 10.2304 -1.6853 -0.0258 38 1 9.6861 -4.4490 -1.2023 39 1 11.2853 -3.6825 -1.0499 40 1 8.3964 -5.0672 0.8463 41 1 9.0767 -4.7407 2.4586 42 1 8.9406 -2.3031 2.0229 43 1 7.3415 -3.0698 1.8704 44 1 5.1386 2.5839 -0.0011 45 1 3.7907 4.6433 -0.0107 46 1 0.4729 4.8947 0.8893 47 1 0.7709 4.8820 -1.9987 48 1 3.1211 6.3075 -1.1935 49 1 1.4393 7.5999 -0.0011 50 1 0.2146 2.3196 0.0009 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17849236_60476.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 15:04:20 Heat of formation + Delta-G solvation = -318.898980 kcal Electronic energy + Delta-G solvation = -38496.031441 eV Core-core repulsion = 32654.526772 eV Total energy + Delta-G solvation = -5841.504669 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 406.153 amu Computer time = 1.61 seconds Orbital eigenvalues (eV) -51.26095 -49.01705 -48.94286 -41.83319 -41.21386 -40.23767 -39.32701 -38.93706 -37.88875 -37.01146 -34.94534 -32.10974 -31.97652 -31.48484 -30.73214 -28.85169 -28.38388 -26.38486 -26.12639 -24.07350 -23.86277 -23.21967 -22.50530 -21.62869 -21.27862 -20.43175 -19.97183 -19.81615 -19.70111 -18.66016 -18.34925 -17.99485 -17.50683 -17.35534 -17.13866 -16.70178 -16.64903 -16.15276 -16.13891 -15.88250 -15.82223 -15.77418 -15.73130 -15.53463 -15.39574 -15.35870 -15.18404 -15.13519 -15.07307 -14.70501 -14.60745 -14.35295 -14.27145 -13.92673 -13.75668 -13.55736 -13.46339 -13.34045 -13.01100 -12.78398 -12.59323 -12.57470 -12.26334 -12.16598 -12.15715 -12.11261 -11.99076 -11.64383 -11.60782 -11.23613 -10.95725 -10.62237 -10.17160 -9.77638 -8.91264 -4.88245 0.17328 0.28534 0.80346 1.33868 1.47459 1.49462 1.64379 2.00397 2.01630 2.31010 2.56337 2.58273 2.93836 3.03875 3.40144 3.46531 3.50870 3.54691 3.66037 3.82386 3.85879 3.87774 3.91260 3.97689 4.06175 4.07306 4.14507 4.14950 4.23695 4.29075 4.29804 4.36168 4.36538 4.45556 4.57269 4.63188 4.65236 4.66380 4.74858 4.95226 5.01462 5.02941 5.04997 5.07477 5.13230 5.19213 5.35291 5.37450 5.42656 5.60151 5.97566 6.43500 6.49212 6.55866 7.17519 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.021 3.979 2 O -0.335 6.335 3 C 0.076 3.924 4 C 0.085 3.915 5 O -0.315 6.315 6 C 0.033 3.967 7 C 0.512 3.488 8 O -0.572 6.572 9 N -0.703 5.703 10 C 0.142 3.858 11 H 0.066 0.934 12 C -0.111 4.111 13 C -0.109 4.109 14 C 0.079 3.921 15 H 0.100 0.900 16 O -0.376 6.376 17 C 0.596 3.404 18 F -0.176 7.176 19 F -0.150 7.150 20 F -0.173 7.173 21 C -0.143 4.143 22 C -0.120 4.120 23 C -0.159 4.159 24 C -0.110 4.110 25 C -0.117 4.117 26 C -0.086 4.086 27 O -0.551 6.551 28 Si 0.777 3.223 29 C -0.153 4.153 30 H 0.065 0.935 31 H 0.062 0.938 32 H 0.110 0.890 33 H 0.127 0.873 34 H 0.130 0.870 35 H 0.424 0.576 36 H 0.096 0.904 37 H 0.101 0.899 38 H 0.073 0.927 39 H 0.095 0.905 40 H 0.068 0.932 41 H 0.074 0.926 42 H 0.090 0.910 43 H 0.053 0.947 44 H 0.177 0.823 45 H 0.159 0.841 46 H 0.122 0.878 47 H 0.386 0.614 48 H -0.275 1.275 49 H -0.308 1.308 50 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.884 7.891 0.410 9.852 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.249 6.249 3 C 0.030 3.970 4 C 0.040 3.960 5 O -0.229 6.229 6 C -0.044 4.044 7 C 0.298 3.702 8 O -0.450 6.450 9 N -0.358 5.358 10 C 0.038 3.962 11 H 0.085 0.915 12 C -0.149 4.149 13 C -0.147 4.147 14 C 0.024 3.976 15 H 0.118 0.882 16 O -0.300 6.300 17 C 0.504 3.496 18 F -0.159 7.159 19 F -0.132 7.132 20 F -0.155 7.155 21 C -0.182 4.182 22 C -0.159 4.159 23 C -0.177 4.177 24 C -0.127 4.127 25 C -0.117 4.117 26 C -0.194 4.194 27 O -0.359 6.359 28 Si 0.682 3.318 29 C -0.172 4.172 30 H 0.084 0.916 31 H 0.080 0.920 32 H 0.129 0.871 33 H 0.145 0.855 34 H 0.147 0.853 35 H 0.262 0.738 36 H 0.115 0.885 37 H 0.119 0.881 38 H 0.092 0.908 39 H 0.114 0.886 40 H 0.087 0.913 41 H 0.093 0.907 42 H 0.109 0.891 43 H 0.072 0.928 44 H 0.195 0.805 45 H 0.176 0.824 46 H 0.140 0.860 47 H 0.235 0.765 48 H -0.201 1.201 49 H -0.236 1.236 50 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 5.191 7.370 0.311 9.020 hybrid contribution -0.692 -0.482 -0.703 1.098 sum 4.499 6.888 -0.392 8.236 Atomic orbital electron populations 1.23271 0.76875 1.05154 1.02060 1.86187 1.22935 1.26694 1.89109 1.18681 0.89980 0.85564 1.02742 1.18589 0.88155 0.86589 1.02676 1.86225 1.18333 1.29029 1.89274 1.22805 0.79271 0.95241 1.07107 1.20584 0.83155 0.90801 0.75632 1.90785 1.64166 1.40187 1.49881 1.45669 1.05034 1.10204 1.74870 1.21038 0.94638 0.84256 0.96286 0.91548 1.21730 0.92943 0.96694 1.03518 1.21573 1.03447 0.96942 0.92764 1.22865 0.93375 0.80502 1.00869 0.88226 1.88380 1.66257 1.40190 1.35196 1.19554 0.76594 0.75055 0.78393 1.93262 1.71296 1.96136 1.55159 1.93266 1.84927 1.39028 1.95931 1.93263 1.61218 1.65467 1.95595 1.22127 0.95349 0.98551 1.02140 1.21816 1.00931 0.95929 0.97217 1.21384 1.02312 0.89232 1.04765 1.21018 0.92351 0.99066 1.00268 1.20132 0.94512 0.94653 1.02439 1.25325 1.00698 1.02375 0.90964 1.86565 1.36813 1.95824 1.16698 0.94016 0.78058 0.72247 0.87487 1.21003 1.00481 0.90590 1.05079 0.91637 0.91975 0.87147 0.85514 0.85251 0.73796 0.88507 0.88079 0.90830 0.88612 0.91342 0.90694 0.89137 0.92817 0.80531 0.82354 0.86030 0.76467 1.20110 1.23621 0.84233 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.05 9.81 113.37 1.11 1.16 16 2 O -0.33 -3.63 10.28 -79.65 -0.82 -4.45 16 3 C 0.08 0.57 6.70 22.57 0.15 0.72 16 4 C 0.09 0.39 6.70 22.57 0.15 0.55 16 5 O -0.31 -2.35 9.45 -67.10 -0.63 -2.98 16 6 C 0.03 -0.14 5.22 71.24 0.37 0.24 16 7 C 0.51 0.82 7.87 87.66 0.69 1.51 16 8 O -0.57 -8.29 16.16 15.99 0.26 -8.03 16 9 N -0.70 4.88 5.08 -442.53 -2.25 2.63 16 10 C 0.14 -0.64 2.45 44.99 0.11 -0.53 16 11 H 0.07 0.13 7.58 -2.39 -0.02 0.12 16 12 C -0.11 1.17 5.39 30.59 0.16 1.33 16 13 C -0.11 0.75 5.57 30.60 0.17 0.92 16 14 C 0.08 -0.28 2.40 30.59 0.07 -0.21 16 15 H 0.10 -0.66 7.20 -2.39 -0.02 -0.67 16 16 O -0.38 -0.52 10.24 -148.98 -1.52 -2.05 16 17 C 0.60 1.14 3.71 113.37 0.42 1.56 16 18 F -0.18 -0.42 15.44 44.97 0.69 0.27 16 19 F -0.15 -0.65 17.53 44.97 0.79 0.13 16 20 F -0.17 -0.16 16.62 44.97 0.75 0.59 16 21 C -0.14 0.22 5.39 30.61 0.17 0.38 16 22 C -0.12 0.36 5.50 30.61 0.17 0.53 16 23 C -0.16 0.59 9.04 22.35 0.20 0.79 16 24 C -0.11 0.45 8.66 22.28 0.19 0.65 16 25 C -0.12 0.06 5.39 -19.86 -0.11 -0.04 16 26 C -0.09 0.16 2.82 71.24 0.20 0.36 16 27 O -0.55 -0.96 12.77 -148.98 -1.90 -2.86 16 28 Si 0.78 -3.53 29.78 68.60 2.04 -1.49 16 29 C -0.15 -0.52 8.60 22.35 0.19 -0.32 16 30 H 0.07 -0.01 7.66 -2.39 -0.02 -0.03 16 31 H 0.06 0.03 7.66 -2.39 -0.02 0.01 16 32 H 0.11 -0.01 8.14 -2.38 -0.02 -0.03 16 33 H 0.13 -1.42 7.67 -2.38 -0.02 -1.44 16 34 H 0.13 -1.49 7.66 -2.39 -0.02 -1.50 16 35 H 0.42 -6.58 8.60 -92.71 -0.80 -7.38 16 36 H 0.10 -1.16 8.14 -2.39 -0.02 -1.18 16 37 H 0.10 -1.49 8.14 -2.39 -0.02 -1.51 16 38 H 0.07 -0.32 8.14 -2.38 -0.02 -0.34 16 39 H 0.10 -0.81 8.14 -2.38 -0.02 -0.83 16 40 H 0.07 0.09 8.14 -2.39 -0.02 0.07 16 41 H 0.07 -0.02 6.50 -2.39 -0.02 -0.03 16 42 H 0.09 -0.64 8.14 -2.39 -0.02 -0.66 16 43 H 0.05 0.15 8.14 -2.38 -0.02 0.13 16 44 H 0.18 -2.17 6.30 -2.91 -0.02 -2.19 16 45 H 0.16 -1.56 4.87 -2.91 -0.01 -1.57 16 46 H 0.12 -0.35 7.96 -2.38 -0.02 -0.37 16 47 H 0.39 -1.48 8.70 -74.06 -0.64 -2.12 16 48 H -0.27 0.52 7.11 99.48 0.71 1.22 16 49 H -0.31 -1.23 7.11 99.48 0.71 -0.52 16 50 H 0.14 0.31 6.30 -2.91 -0.02 0.29 16 Total: 0.00 -30.64 418.58 1.46 -29.18 By element: Atomic # 1 Polarization: -20.15 SS G_CDS: -0.38 Total: -20.53 kcal Atomic # 6 Polarization: 5.15 SS G_CDS: 4.43 Total: 9.58 kcal Atomic # 7 Polarization: 4.88 SS G_CDS: -2.25 Total: 2.63 kcal Atomic # 8 Polarization: -15.75 SS G_CDS: -4.62 Total: -20.37 kcal Atomic # 9 Polarization: -1.23 SS G_CDS: 2.23 Total: 0.99 kcal Atomic # 14 Polarization: -3.53 SS G_CDS: 2.04 Total: -1.49 kcal Total: -30.64 1.46 -29.18 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17849236_60476.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -289.717 kcal (2) G-P(sol) polarization free energy of solvation -30.640 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -320.357 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.458 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.182 kcal (6) G-S(sol) free energy of system = (1) + (5) -318.899 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.61 seconds