Wall clock time and date at job start Sun Mar 7 2021 15:04:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.35963 * 116.99737 * 2 1 4 4 C 1.39454 * 120.11888 * 180.02562 * 3 2 1 5 5 O 1.34772 * 133.24136 * 0.34459 * 4 3 2 6 6 C 1.34927 * 110.84396 * 180.12188 * 5 4 3 7 7 C 1.46993 * 125.14249 * 179.80823 * 6 5 4 8 8 O 1.21653 * 120.00361 * 179.69450 * 7 6 5 9 9 N 1.34777 * 119.99852 * 359.70317 * 7 6 5 10 10 C 1.46505 * 119.99797 * 179.97438 * 9 7 6 11 11 H 1.08992 * 109.47276 * 325.00066 * 10 9 7 12 12 C 1.53002 * 109.46958 * 84.99979 * 10 9 7 13 13 C 1.52997 * 109.46978 * 180.02562 * 12 10 9 14 14 C 1.53006 * 109.47164 * 299.99874 * 13 12 10 15 15 H 1.08998 * 109.46505 * 299.99708 * 14 13 12 16 16 O 1.42895 * 109.47000 * 180.02562 * 14 13 12 17 17 C 1.42905 * 114.00128 * 90.00194 * 16 14 13 18 18 F 1.39897 * 109.47269 * 59.99344 * 17 16 14 19 19 F 1.39901 * 109.46873 * 179.97438 * 17 16 14 20 20 F 1.39903 * 109.46764 * 299.99541 * 17 16 14 21 21 C 1.52997 * 109.47127 * 59.99836 * 14 13 12 22 22 C 1.52996 * 109.46998 * 204.99519 * 10 9 7 23 23 C 1.35806 * 109.71671 * 359.54978 * 6 5 4 24 24 C 1.40608 * 119.13818 * 179.97438 * 4 3 2 25 25 C 1.39772 * 120.11746 * 0.02562 * 24 4 3 26 26 C 1.50705 * 120.09550 * 180.02562 * 25 24 4 27 27 O 1.42900 * 109.47294 * 74.99563 * 26 25 24 28 28 Si 1.86297 * 109.47440 * 194.99997 * 26 25 24 29 29 C 1.36629 * 119.81667 * 359.97438 * 25 24 4 30 30 C 1.38256 * 120.12525 * 359.97438 * 3 2 1 31 31 H 1.08996 * 109.47101 * 300.00263 * 1 2 3 32 32 H 1.09000 * 109.46901 * 60.00335 * 1 2 3 33 33 H 1.08997 * 109.46902 * 180.02562 * 1 2 3 34 34 H 0.97001 * 120.00457 * 359.97438 * 9 7 6 35 35 H 1.09002 * 109.47097 * 299.99818 * 12 10 9 36 36 H 1.09001 * 109.47142 * 59.99782 * 12 10 9 37 37 H 1.09001 * 109.47375 * 59.99908 * 13 12 10 38 38 H 1.09000 * 109.47140 * 179.97438 * 13 12 10 39 39 H 1.09002 * 109.47153 * 180.02562 * 21 14 13 40 40 H 1.09001 * 109.46832 * 60.00321 * 21 14 13 41 41 H 1.09004 * 109.47368 * 60.00227 * 22 10 9 42 42 H 1.09001 * 109.47372 * 300.00383 * 22 10 9 43 43 H 1.08001 * 126.95361 * 180.26541 * 23 6 5 44 44 H 1.09002 * 109.46522 * 314.99910 * 26 25 24 45 45 H 0.96699 * 114.00207 * 179.97438 * 27 26 25 46 46 H 1.48499 * 109.99897 * 300.00308 * 28 26 25 47 47 H 1.48506 * 109.99963 * 61.31552 * 28 26 25 48 48 H 1.07995 * 119.75499 * 179.97438 * 29 25 24 49 49 H 1.07999 * 119.65953 * 359.97438 * 30 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2115 0.0000 4 6 3.4387 1.2874 -0.0005 5 8 4.4141 0.3574 -0.0070 6 6 5.6317 0.9386 -0.0016 7 6 6.9131 0.2184 -0.0022 8 8 7.9596 0.8387 -0.0026 9 7 6.9286 -1.1293 -0.0025 10 6 8.2058 -1.8471 -0.0037 11 1 8.9345 -1.2912 -0.5935 12 6 8.7131 -1.9877 1.4329 13 6 10.0471 -2.7368 1.4316 14 6 9.8513 -4.1263 0.8217 15 1 9.1228 -4.6825 1.4116 16 8 11.0971 -4.8261 0.8211 17 6 11.3341 -5.5921 2.0039 18 9 10.3235 -6.5483 2.1506 19 9 12.5727 -6.2348 1.9029 20 9 11.3380 -4.7434 3.1161 21 6 9.3439 -3.9857 -0.6148 22 6 8.0093 -3.2366 -0.6133 23 6 5.4945 2.2897 -0.0013 24 6 4.0555 2.5510 -0.0011 25 6 3.2766 3.7116 -0.0005 26 6 3.9382 5.0657 -0.0017 27 8 4.4592 5.3402 -1.3037 28 14 2.6870 6.3686 0.4539 29 6 1.9137 3.6151 0.0000 30 6 1.2957 2.3726 -0.0005 31 1 -0.3633 0.5139 0.8899 32 1 -0.3633 0.5138 -0.8900 33 1 -0.3633 -1.0276 0.0005 34 1 6.0943 -1.6240 -0.0019 35 1 8.8531 -0.9978 1.8673 36 1 7.9843 -2.5436 2.0228 37 1 10.7757 -2.1805 0.8418 38 1 10.4088 -2.8365 2.4551 39 1 9.2039 -4.9756 -1.0492 40 1 10.0724 -3.4294 -1.2047 41 1 7.6478 -3.1365 -1.6368 42 1 7.2805 -3.7925 -0.0234 43 1 6.2875 3.0229 -0.0015 44 1 4.7514 5.0733 0.7241 45 1 4.8997 6.1978 -1.3783 46 1 1.5729 6.3683 -0.5279 47 1 2.1610 6.1124 1.8189 48 1 1.3129 4.5125 0.0008 49 1 0.2175 2.3120 -0.0014 There are 76 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 76 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17849236_6672420.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 15:04:38 Heat of formation + Delta-G solvation = -274.505863 kcal Electronic energy + Delta-G solvation = -40127.269753 eV Core-core repulsion = 34186.775452 eV Total energy + Delta-G solvation = -5940.494301 eV No. of doubly occupied orbitals = 76 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 416.137 amu Computer time = 1.52 seconds Orbital eigenvalues (eV) -51.17404 -48.90908 -48.86784 -43.69811 -41.33051 -40.69147 -40.01286 -39.00433 -38.00667 -37.11550 -35.02160 -33.60728 -32.14664 -32.07228 -31.29251 -30.05155 -28.66467 -26.50267 -26.22969 -25.13983 -24.13176 -24.00966 -23.29994 -21.82650 -21.67010 -21.45402 -20.42525 -19.89593 -19.83664 -19.55760 -18.85995 -18.53753 -18.46317 -17.67250 -17.61630 -17.05422 -16.85523 -16.68397 -16.36080 -16.22482 -15.88922 -15.84062 -15.63219 -15.49661 -15.47148 -15.30229 -15.27523 -15.07324 -15.01025 -14.79867 -14.64937 -14.55267 -14.37550 -14.28034 -14.03283 -14.00256 -13.96368 -13.50518 -13.44063 -13.21510 -13.13698 -12.87082 -12.66006 -12.46276 -12.42138 -12.24924 -12.11705 -11.91994 -11.76993 -11.47084 -11.29802 -10.96918 -10.35967 -10.31568 -9.80667 -9.02532 -5.04279 -0.62165 0.07563 0.67794 0.83120 1.18398 1.25809 1.57468 1.85407 1.88332 2.00159 2.01924 2.07225 2.34460 2.99152 3.08369 3.14547 3.31639 3.35695 3.38604 3.50698 3.65005 3.66988 3.72484 3.79197 3.82094 3.87890 3.95630 3.96304 4.04712 4.06110 4.08810 4.11944 4.18529 4.28598 4.33394 4.41503 4.42317 4.46420 4.60722 4.75886 4.78489 4.83218 4.85397 4.88602 4.94903 5.02079 5.02736 5.18784 5.21340 5.25006 5.29233 5.59075 6.10933 6.28030 6.59114 6.88286 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.309 6.309 3 C 0.151 3.849 4 C 0.048 3.952 5 O -0.173 6.173 6 C -0.025 4.025 7 C 0.605 3.395 8 O -0.507 6.507 9 N -0.714 5.714 10 C 0.140 3.860 11 H 0.099 0.901 12 C -0.128 4.128 13 C -0.144 4.144 14 C 0.082 3.918 15 H 0.084 0.916 16 O -0.366 6.366 17 C 0.594 3.406 18 F -0.176 7.176 19 F -0.141 7.141 20 F -0.174 7.174 21 C -0.109 4.109 22 C -0.124 4.124 23 C -0.101 4.101 24 C -0.082 4.082 25 C -0.051 4.051 26 C -0.070 4.070 27 O -0.543 6.543 28 Si 0.686 3.314 29 C -0.096 4.096 30 C -0.177 4.177 31 H 0.060 0.940 32 H 0.060 0.940 33 H 0.107 0.893 34 H 0.409 0.591 35 H 0.081 0.919 36 H 0.071 0.929 37 H 0.084 0.916 38 H 0.082 0.918 39 H 0.085 0.915 40 H 0.085 0.915 41 H 0.086 0.914 42 H 0.076 0.924 43 H 0.175 0.825 44 H 0.075 0.925 45 H 0.383 0.617 46 H -0.249 1.249 47 H -0.253 1.253 48 H 0.134 0.866 49 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.597 2.373 0.148 5.176 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.223 6.223 3 C 0.105 3.895 4 C 0.000 4.000 5 O -0.075 6.075 6 C -0.075 4.075 7 C 0.390 3.610 8 O -0.383 6.383 9 N -0.365 5.365 10 C 0.036 3.964 11 H 0.117 0.883 12 C -0.166 4.166 13 C -0.183 4.183 14 C 0.027 3.973 15 H 0.102 0.898 16 O -0.290 6.290 17 C 0.502 3.498 18 F -0.158 7.158 19 F -0.123 7.123 20 F -0.156 7.156 21 C -0.147 4.147 22 C -0.162 4.162 23 C -0.121 4.121 24 C -0.083 4.083 25 C -0.052 4.052 26 C -0.181 4.181 27 O -0.349 6.349 28 Si 0.587 3.413 29 C -0.114 4.114 30 C -0.196 4.196 31 H 0.079 0.921 32 H 0.079 0.921 33 H 0.125 0.875 34 H 0.244 0.756 35 H 0.100 0.900 36 H 0.089 0.911 37 H 0.103 0.897 38 H 0.100 0.900 39 H 0.104 0.896 40 H 0.104 0.896 41 H 0.105 0.895 42 H 0.095 0.905 43 H 0.192 0.808 44 H 0.093 0.907 45 H 0.231 0.769 46 H -0.174 1.174 47 H -0.177 1.177 48 H 0.151 0.849 49 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges -4.755 1.864 0.135 5.109 hybrid contribution -0.583 -0.764 0.373 1.031 sum -5.338 1.100 0.508 5.474 Atomic orbital electron populations 1.23198 0.77292 1.04810 1.01796 1.86169 1.22176 1.25533 1.88376 1.17692 0.86510 0.85812 0.99466 1.18727 0.87419 0.86889 1.07011 1.84044 1.12631 1.34637 1.76141 1.21962 0.83911 0.92582 1.09064 1.16592 0.85385 0.82134 0.76882 1.90923 1.30238 1.67430 1.49736 1.45943 1.10365 1.05691 1.74477 1.21184 0.85382 0.92637 0.97163 0.88280 1.21900 0.96343 1.01834 0.96560 1.22166 0.98684 0.94600 1.02817 1.22663 0.82370 0.92572 0.99716 0.89792 1.88361 1.42342 1.62880 1.35420 1.19573 0.75115 0.76785 0.78310 1.93262 1.61384 1.65579 1.95558 1.93289 1.41978 1.81146 1.95868 1.93266 1.96255 1.71055 1.55065 1.21543 0.96860 1.02429 0.93911 1.21800 0.97426 0.94236 1.02768 1.22709 0.94572 0.94352 1.00501 1.19393 0.92794 0.91962 1.04151 1.18443 0.92235 0.92352 1.02159 1.24659 1.05118 0.99232 0.89080 1.86521 1.77962 1.41945 1.28465 0.95124 0.79545 0.86724 0.79941 1.20421 0.93507 0.97459 1.00019 1.20928 1.00399 0.90436 1.07820 0.92132 0.92091 0.87510 0.75572 0.90044 0.91061 0.89724 0.89956 0.89646 0.89636 0.89543 0.90494 0.80762 0.90698 0.76941 1.17367 1.17750 0.84919 0.83450 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.05 9.81 101.05 0.99 0.94 16 2 O -0.31 -0.62 10.50 -19.62 -0.21 -0.82 16 3 C 0.15 0.41 6.70 -39.12 -0.26 0.15 16 4 C 0.05 0.19 7.35 -38.24 -0.28 -0.09 16 5 O -0.17 -0.59 10.28 2.67 0.03 -0.56 16 6 C -0.02 -0.07 7.07 -36.91 -0.26 -0.33 16 7 C 0.60 1.50 7.76 -12.71 -0.10 1.40 16 8 O -0.51 -2.55 16.49 5.23 0.09 -2.47 16 9 N -0.71 0.30 5.07 -55.02 -0.28 0.02 16 10 C 0.14 -0.18 2.45 -67.93 -0.17 -0.35 16 11 H 0.10 0.00 7.58 -51.93 -0.39 -0.39 16 12 C -0.13 0.15 5.49 -26.73 -0.15 0.01 16 13 C -0.14 0.16 5.39 -26.73 -0.14 0.02 16 14 C 0.08 -0.10 2.40 -26.73 -0.06 -0.16 16 15 H 0.08 -0.16 7.20 -51.93 -0.37 -0.54 16 16 O -0.37 -0.29 10.24 -35.23 -0.36 -0.65 16 17 C 0.59 0.67 3.71 101.05 0.37 1.05 16 18 F -0.18 -0.20 16.61 2.25 0.04 -0.16 16 19 F -0.14 -0.30 17.53 2.25 0.04 -0.26 16 20 F -0.17 -0.21 15.44 2.25 0.03 -0.18 16 21 C -0.11 0.27 5.58 -26.71 -0.15 0.12 16 22 C -0.12 0.40 5.39 -26.71 -0.14 0.25 16 23 C -0.10 -0.30 10.68 -37.23 -0.40 -0.70 16 24 C -0.08 -0.30 6.16 -105.21 -0.65 -0.94 16 25 C -0.05 -0.14 5.30 -104.63 -0.55 -0.69 16 26 C -0.07 -0.01 2.70 36.01 0.10 0.09 16 27 O -0.54 -0.18 12.86 -35.23 -0.45 -0.63 16 28 Si 0.69 -1.04 30.20 -169.99 -5.13 -6.18 16 29 C -0.10 -0.18 8.62 -39.97 -0.34 -0.53 16 30 C -0.18 -0.21 9.03 -39.38 -0.36 -0.56 16 31 H 0.06 -0.19 7.66 -51.93 -0.40 -0.59 16 32 H 0.06 -0.19 7.66 -51.93 -0.40 -0.58 16 33 H 0.11 -0.39 8.14 -51.93 -0.42 -0.81 16 34 H 0.41 -0.80 8.32 -40.82 -0.34 -1.14 16 35 H 0.08 0.03 8.14 -51.93 -0.42 -0.39 16 36 H 0.07 -0.13 8.14 -51.93 -0.42 -0.56 16 37 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 38 H 0.08 -0.05 6.50 -51.93 -0.34 -0.39 16 39 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 40 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 41 H 0.09 -0.30 8.14 -51.93 -0.42 -0.72 16 42 H 0.08 -0.31 8.14 -51.93 -0.42 -0.73 16 43 H 0.17 0.30 8.06 -52.49 -0.42 -0.12 16 44 H 0.08 -0.10 7.96 -51.93 -0.41 -0.51 16 45 H 0.38 -1.83 8.74 45.56 0.40 -1.43 16 46 H -0.25 -0.25 6.75 56.52 0.38 0.14 16 47 H -0.25 -0.24 7.11 56.52 0.40 0.17 16 48 H 0.13 0.10 4.85 -52.49 -0.25 -0.16 16 49 H 0.15 -0.25 6.26 -52.49 -0.33 -0.58 16 LS Contribution 416.59 15.07 6.28 6.28 Total: 0.00 -8.71 416.59 -8.34 -17.06 By element: Atomic # 1 Polarization: -5.24 SS G_CDS: -5.86 Total: -11.10 kcal Atomic # 6 Polarization: 2.21 SS G_CDS: -2.55 Total: -0.34 kcal Atomic # 7 Polarization: 0.30 SS G_CDS: -0.28 Total: 0.02 kcal Atomic # 8 Polarization: -4.23 SS G_CDS: -0.91 Total: -5.14 kcal Atomic # 9 Polarization: -0.71 SS G_CDS: 0.11 Total: -0.60 kcal Atomic # 14 Polarization: -1.04 SS G_CDS: -5.13 Total: -6.18 kcal Total LS contribution 6.28 Total: 6.28 kcal Total: -8.71 -8.34 -17.06 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17849236_6672420.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -257.449 kcal (2) G-P(sol) polarization free energy of solvation -8.713 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -266.162 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.344 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.057 kcal (6) G-S(sol) free energy of system = (1) + (5) -274.506 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.52 seconds