Wall clock time and date at job start Sun Mar 7 2021 15:04:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86298 * 109.47414 * 2 1 4 4 C 1.50701 * 109.46699 * 119.99801 * 2 1 3 5 5 C 1.34238 * 126.50416 * 255.26424 * 4 2 1 6 6 N 1.36830 * 109.94075 * 180.20417 * 5 4 2 7 7 C 1.46499 * 125.06247 * 179.81492 * 6 5 4 8 8 C 1.50703 * 109.47337 * 264.70505 * 7 6 5 9 9 O 1.21282 * 119.99871 * 359.97438 * 8 7 6 10 10 N 1.34773 * 120.00217 * 180.02562 * 8 7 6 11 11 C 1.46496 * 120.00354 * 180.02562 * 10 8 7 12 12 H 1.09002 * 109.47021 * 324.99874 * 11 10 8 13 13 C 1.53002 * 109.47313 * 84.99862 * 11 10 8 14 14 C 1.53001 * 109.46963 * 180.02562 * 13 11 10 15 15 C 1.53000 * 109.46886 * 299.99499 * 14 13 11 16 16 H 1.09002 * 109.47398 * 300.00496 * 15 14 13 17 17 O 1.42903 * 109.46726 * 180.02562 * 15 14 13 18 18 C 1.42901 * 113.99972 * 90.00358 * 17 15 14 19 19 F 1.39904 * 109.46920 * 59.99628 * 18 17 15 20 20 F 1.39896 * 109.47154 * 179.97438 * 18 17 15 21 21 F 1.39899 * 109.47205 * 299.99716 * 18 17 15 22 22 C 1.53002 * 109.47233 * 60.00670 * 15 14 13 23 23 C 1.52997 * 109.47194 * 204.99986 * 11 10 8 24 24 C 1.37699 * 109.87264 * 359.56164 * 6 5 4 25 25 C 1.39077 * 133.51063 * 180.28281 * 24 6 5 26 26 C 1.37791 * 119.77698 * 179.97438 * 25 24 6 27 27 C 1.38787 * 120.66657 * 0.02562 * 26 25 24 28 28 C 1.36665 * 120.52765 * 359.95778 * 27 26 25 29 29 C 1.39587 * 119.76331 * 0.04428 * 28 27 26 30 30 H 0.96705 * 114.00024 * 300.00551 * 1 2 3 31 31 H 1.09001 * 109.47235 * 239.99584 * 2 1 3 32 32 H 1.48502 * 110.00139 * 299.99933 * 3 2 1 33 33 H 1.48499 * 109.99929 * 61.31775 * 3 2 1 34 34 H 1.08007 * 125.02697 * 0.05114 * 5 4 2 35 35 H 1.09005 * 109.47066 * 144.70350 * 7 6 5 36 36 H 1.08999 * 109.47190 * 24.70566 * 7 6 5 37 37 H 0.97007 * 119.99952 * 359.97438 * 10 8 7 38 38 H 1.09000 * 109.46497 * 300.00287 * 13 11 10 39 39 H 1.09002 * 109.47067 * 60.00040 * 13 11 10 40 40 H 1.09001 * 109.46652 * 179.97438 * 14 13 11 41 41 H 1.08992 * 109.47514 * 59.99933 * 14 13 11 42 42 H 1.09002 * 109.47075 * 59.99068 * 22 15 14 43 43 H 1.08996 * 109.47407 * 180.02562 * 22 15 14 44 44 H 1.09001 * 109.47375 * 59.99949 * 23 11 10 45 45 H 1.09002 * 109.47497 * 299.99590 * 23 11 10 46 46 H 1.07999 * 120.11387 * 359.94702 * 25 24 6 47 47 H 1.07999 * 119.67036 * 179.97438 * 26 25 24 48 48 H 1.08000 * 119.73945 * 179.97438 * 27 26 25 49 49 H 1.08003 * 120.12133 * 179.97438 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9312 -0.7104 1.2305 5 6 2.4561 -0.1373 2.3251 6 7 2.8039 -1.0991 3.2342 7 6 3.4095 -0.8405 4.5428 8 6 4.9077 -0.9630 4.4361 9 8 5.4192 -1.2396 3.3717 10 7 5.6792 -0.7663 5.5235 11 6 7.1356 -0.8848 5.4196 12 1 7.3863 -1.6692 4.7054 13 6 7.7230 0.4453 4.9435 14 6 9.2440 0.3212 4.8344 15 6 9.8264 -0.0321 6.2044 16 1 9.5760 0.7522 6.9189 17 8 11.2471 -0.1474 6.1027 18 6 11.9478 1.0759 6.3367 19 9 11.6623 1.5375 7.6261 20 9 13.3239 0.8558 6.2146 21 9 11.5430 2.0319 5.3989 22 6 9.2391 -1.3622 6.6807 23 6 7.7176 -1.2379 6.7899 24 6 2.4945 -2.3458 2.7381 25 6 2.6293 -3.6362 3.2391 26 6 2.2147 -4.7107 2.4827 27 6 1.6632 -4.5193 1.2235 28 6 1.5212 -3.2600 0.7120 29 6 1.9346 -2.1571 1.4611 30 1 -0.3933 0.4418 0.7650 31 1 1.7924 -0.5139 -0.8899 32 1 1.5616 2.4679 -1.2085 33 1 1.5880 2.4585 1.2242 34 1 2.5871 0.9254 2.4662 35 1 3.0362 -1.5660 5.2657 36 1 3.1497 0.1659 4.8709 37 1 5.2700 -0.5454 6.3749 38 1 7.3083 0.6967 3.9673 39 1 7.4723 1.2296 5.6577 40 1 9.6624 1.2687 4.4947 41 1 9.4943 -0.4630 4.1200 42 1 9.4894 -2.1464 5.9662 43 1 9.6536 -1.6137 7.6569 44 1 7.2992 -2.1855 7.1291 45 1 7.4670 -0.4536 7.5042 46 1 3.0580 -3.7956 4.2174 47 1 2.3205 -5.7120 2.8732 48 1 1.3436 -5.3723 0.6433 49 1 1.0916 -3.1186 -0.2688 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17849236_9818708.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 15:04:57 Heat of formation + Delta-G solvation = -208.797422 kcal Electronic energy + Delta-G solvation = -37850.791391 eV Core-core repulsion = 32329.547276 eV Total energy + Delta-G solvation = -5521.244115 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 399.149 amu Computer time = 1.31 seconds Orbital eigenvalues (eV) -51.22027 -48.95325 -48.91530 -42.52166 -41.28648 -40.14751 -38.19292 -38.00827 -37.52522 -35.05483 -34.05809 -32.21453 -31.57263 -30.37541 -30.13361 -28.65703 -26.40846 -25.70386 -24.23313 -23.91870 -23.46628 -22.53133 -21.76521 -21.47769 -20.62227 -20.44609 -19.94324 -19.73217 -18.71862 -18.50274 -17.86983 -17.50495 -17.13456 -16.73796 -16.45724 -16.32535 -16.12434 -16.02464 -15.75718 -15.67357 -15.56423 -15.49151 -15.32750 -15.27422 -15.11452 -15.06841 -14.88795 -14.70977 -14.58704 -14.50369 -14.34699 -14.02743 -14.01009 -13.67585 -13.57572 -13.37171 -13.16118 -12.89556 -12.61854 -12.50003 -12.47494 -12.32200 -12.29047 -11.90230 -11.83150 -11.64796 -11.40338 -11.12981 -10.44698 -10.37148 -10.32258 -9.04936 -8.55756 -4.88365 0.25364 0.76326 0.79209 1.33659 1.36295 1.38361 1.59965 1.67308 1.96049 2.01040 2.07917 2.94139 3.03316 3.08749 3.25299 3.31504 3.39916 3.44751 3.56895 3.61317 3.66102 3.70121 3.77200 3.78645 3.80708 3.83472 4.02231 4.04182 4.10670 4.24432 4.29513 4.34746 4.38679 4.54811 4.57575 4.67272 4.70341 4.78216 4.78932 4.82905 4.88186 4.89934 4.95778 4.97645 5.18272 5.21214 5.23717 5.62486 5.78539 5.84060 5.87880 6.09706 6.27346 6.33875 6.57894 6.94493 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.531 6.531 2 C -0.037 4.037 3 Si 0.682 3.318 4 C -0.192 4.192 5 C 0.065 3.935 6 N -0.466 5.466 7 C 0.091 3.909 8 C 0.492 3.508 9 O -0.509 6.509 10 N -0.726 5.726 11 C 0.142 3.858 12 H 0.095 0.905 13 C -0.125 4.125 14 C -0.145 4.145 15 C 0.083 3.917 16 H 0.084 0.916 17 O -0.366 6.366 18 C 0.594 3.406 19 F -0.176 7.176 20 F -0.141 7.141 21 F -0.174 7.174 22 C -0.110 4.110 23 C -0.123 4.123 24 C 0.109 3.891 25 C -0.128 4.128 26 C -0.096 4.096 27 C -0.146 4.146 28 C -0.065 4.065 29 C -0.086 4.086 30 H 0.372 0.628 31 H 0.114 0.886 32 H -0.256 1.256 33 H -0.261 1.261 34 H 0.168 0.832 35 H 0.117 0.883 36 H 0.122 0.878 37 H 0.402 0.598 38 H 0.079 0.921 39 H 0.069 0.931 40 H 0.081 0.919 41 H 0.083 0.917 42 H 0.084 0.916 43 H 0.084 0.916 44 H 0.084 0.916 45 H 0.075 0.925 46 H 0.114 0.886 47 H 0.125 0.875 48 H 0.123 0.877 49 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.414 0.983 6.396 6.484 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.337 6.337 2 C -0.148 4.148 3 Si 0.583 3.417 4 C -0.200 4.200 5 C -0.059 4.059 6 N -0.149 5.149 7 C -0.035 4.035 8 C 0.276 3.724 9 O -0.382 6.382 10 N -0.379 5.379 11 C 0.038 3.962 12 H 0.113 0.887 13 C -0.164 4.164 14 C -0.183 4.183 15 C 0.028 3.972 16 H 0.102 0.898 17 O -0.290 6.290 18 C 0.502 3.498 19 F -0.158 7.158 20 F -0.122 7.122 21 F -0.156 7.156 22 C -0.149 4.149 23 C -0.161 4.161 24 C 0.005 3.995 25 C -0.149 4.149 26 C -0.115 4.115 27 C -0.165 4.165 28 C -0.083 4.083 29 C -0.090 4.090 30 H 0.220 0.780 31 H 0.132 0.868 32 H -0.180 1.180 33 H -0.185 1.185 34 H 0.185 0.815 35 H 0.135 0.865 36 H 0.140 0.860 37 H 0.236 0.764 38 H 0.098 0.902 39 H 0.088 0.912 40 H 0.100 0.900 41 H 0.102 0.898 42 H 0.103 0.897 43 H 0.103 0.897 44 H 0.102 0.898 45 H 0.094 0.906 46 H 0.132 0.868 47 H 0.143 0.857 48 H 0.141 0.859 49 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges 0.071 1.257 5.297 5.444 hybrid contribution -0.965 0.322 1.222 1.590 sum -0.894 1.578 6.519 6.766 Atomic orbital electron populations 1.86609 1.18146 1.79954 1.48964 1.24284 0.83286 1.09817 0.97369 0.95032 0.91780 0.74468 0.80380 1.20584 1.09805 0.92342 0.97247 1.21576 1.00954 0.93978 0.89425 1.43188 1.52479 1.04652 1.14591 1.21585 0.90832 1.05792 0.85297 1.21002 0.89437 0.77433 0.84542 1.90823 1.74574 1.45262 1.27522 1.45999 1.07051 1.72708 1.12158 1.21087 0.78667 0.98485 0.97993 0.88722 1.21871 0.94159 0.97340 1.03041 1.22166 0.95640 1.04046 0.96490 1.22648 0.75545 1.00513 0.98523 0.89844 1.88367 1.22341 1.28009 1.90303 1.19568 0.77531 0.78324 0.74345 1.93263 1.93404 1.89295 1.39836 1.93290 1.28518 1.94662 1.95773 1.93265 1.90415 1.65924 1.66024 1.21547 0.94238 0.95654 1.03416 1.21785 0.94490 1.03419 0.96388 1.18165 1.01208 0.85832 0.94336 1.19945 1.05047 0.89250 1.00627 1.20828 0.98288 0.97937 0.94482 1.20677 1.02421 0.96956 0.96410 1.20314 0.97896 0.90918 0.99188 1.18937 1.03384 0.92776 0.93921 0.78041 0.86781 1.18018 1.18543 0.81481 0.86471 0.86044 0.76368 0.90208 0.91249 0.89994 0.89825 0.89720 0.89707 0.89753 0.90641 0.86772 0.85730 0.85913 0.85902 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.28 12.88 -35.23 -0.45 -1.73 16 2 C -0.04 -0.05 3.06 36.01 0.11 0.06 16 3 Si 0.68 -0.21 30.83 -169.99 -5.24 -5.46 16 4 C -0.19 -0.40 5.57 -102.71 -0.57 -0.98 16 5 C 0.07 0.04 9.89 -16.73 -0.17 -0.13 16 6 N -0.47 -0.32 2.27 -115.71 -0.26 -0.58 16 7 C 0.09 -0.29 6.48 -5.19 -0.03 -0.33 16 8 C 0.49 -0.63 7.86 -10.99 -0.09 -0.71 16 9 O -0.51 -1.86 16.08 5.56 0.09 -1.77 16 10 N -0.73 3.03 5.08 -53.81 -0.27 2.76 16 11 C 0.14 -0.45 2.45 -67.93 -0.17 -0.62 16 12 H 0.09 -0.07 7.58 -51.93 -0.39 -0.47 16 13 C -0.13 0.34 5.49 -26.73 -0.15 0.19 16 14 C -0.15 0.28 5.39 -26.73 -0.14 0.14 16 15 C 0.08 -0.18 2.40 -26.73 -0.06 -0.24 16 16 H 0.08 -0.25 7.20 -51.93 -0.37 -0.62 16 17 O -0.37 -0.06 10.24 -35.23 -0.36 -0.42 16 18 C 0.59 0.30 3.71 101.05 0.37 0.67 16 19 F -0.18 -0.07 16.61 2.25 0.04 -0.04 16 20 F -0.14 -0.23 17.53 2.25 0.04 -0.19 16 21 F -0.17 -0.10 15.44 2.25 0.03 -0.06 16 22 C -0.11 0.38 5.58 -26.70 -0.15 0.23 16 23 C -0.12 0.60 5.39 -26.71 -0.14 0.46 16 24 C 0.11 0.32 6.80 -83.99 -0.57 -0.25 16 25 C -0.13 -0.27 10.00 -39.43 -0.39 -0.66 16 26 C -0.10 -0.18 10.01 -39.54 -0.40 -0.57 16 27 C -0.15 -0.34 9.97 -39.95 -0.40 -0.74 16 28 C -0.06 -0.22 10.05 -39.65 -0.40 -0.62 16 29 C -0.09 -0.33 6.35 -105.14 -0.67 -1.00 16 30 H 0.37 -0.25 8.70 45.56 0.40 0.15 16 31 H 0.11 0.14 7.96 -51.93 -0.41 -0.28 16 32 H -0.26 -0.74 7.11 56.52 0.40 -0.34 16 33 H -0.26 -0.13 6.99 56.52 0.40 0.26 16 34 H 0.17 -0.35 6.27 -52.48 -0.33 -0.68 16 35 H 0.12 -0.61 8.14 -51.93 -0.42 -1.04 16 36 H 0.12 -0.77 8.12 -51.93 -0.42 -1.19 16 37 H 0.40 -2.90 8.60 -40.82 -0.35 -3.26 16 38 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 39 H 0.07 -0.25 8.14 -51.93 -0.42 -0.68 16 40 H 0.08 -0.11 6.50 -51.93 -0.34 -0.45 16 41 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 42 H 0.08 -0.24 8.14 -51.93 -0.42 -0.67 16 43 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 44 H 0.08 -0.44 8.14 -51.93 -0.42 -0.86 16 45 H 0.07 -0.45 8.14 -51.93 -0.42 -0.87 16 46 H 0.11 0.01 8.06 -52.49 -0.42 -0.41 16 47 H 0.12 -0.04 8.06 -52.49 -0.42 -0.46 16 48 H 0.12 0.06 8.06 -52.49 -0.42 -0.37 16 49 H 0.12 0.30 8.06 -52.48 -0.42 -0.12 16 LS Contribution 415.83 15.07 6.27 6.27 Total: 0.00 -9.75 415.83 -10.64 -20.39 By element: Atomic # 1 Polarization: -7.59 SS G_CDS: -6.50 Total: -14.09 kcal Atomic # 6 Polarization: -1.07 SS G_CDS: -4.01 Total: -5.08 kcal Atomic # 7 Polarization: 2.71 SS G_CDS: -0.54 Total: 2.18 kcal Atomic # 8 Polarization: -3.19 SS G_CDS: -0.73 Total: -3.92 kcal Atomic # 9 Polarization: -0.40 SS G_CDS: 0.11 Total: -0.29 kcal Atomic # 14 Polarization: -0.21 SS G_CDS: -5.24 Total: -5.46 kcal Total LS contribution 6.27 Total: 6.27 kcal Total: -9.75 -10.64 -20.39 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17849236_9818708.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -188.412 kcal (2) G-P(sol) polarization free energy of solvation -9.747 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -198.159 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.638 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.385 kcal (6) G-S(sol) free energy of system = (1) + (5) -208.797 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.31 seconds