Wall clock time and date at job start Sun Mar 7 2021 15:04:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86298 * 109.47414 * 2 1 4 4 C 1.50701 * 109.46699 * 119.99801 * 2 1 3 5 5 C 1.34238 * 126.50416 * 255.26424 * 4 2 1 6 6 N 1.36830 * 109.94075 * 180.20417 * 5 4 2 7 7 C 1.46499 * 125.06247 * 179.81492 * 6 5 4 8 8 C 1.50703 * 109.47337 * 264.70505 * 7 6 5 9 9 O 1.21282 * 119.99871 * 359.97438 * 8 7 6 10 10 N 1.34773 * 120.00217 * 180.02562 * 8 7 6 11 11 C 1.46496 * 120.00354 * 180.02562 * 10 8 7 12 12 H 1.09002 * 109.47021 * 324.99874 * 11 10 8 13 13 C 1.53002 * 109.47313 * 84.99862 * 11 10 8 14 14 C 1.53001 * 109.46963 * 180.02562 * 13 11 10 15 15 C 1.53000 * 109.46886 * 299.99499 * 14 13 11 16 16 H 1.09002 * 109.47398 * 300.00496 * 15 14 13 17 17 O 1.42903 * 109.46726 * 180.02562 * 15 14 13 18 18 C 1.42901 * 113.99972 * 90.00358 * 17 15 14 19 19 F 1.39904 * 109.46920 * 59.99628 * 18 17 15 20 20 F 1.39896 * 109.47154 * 179.97438 * 18 17 15 21 21 F 1.39899 * 109.47205 * 299.99716 * 18 17 15 22 22 C 1.53002 * 109.47233 * 60.00670 * 15 14 13 23 23 C 1.52997 * 109.47194 * 204.99986 * 11 10 8 24 24 C 1.37699 * 109.87264 * 359.56164 * 6 5 4 25 25 C 1.39077 * 133.51063 * 180.28281 * 24 6 5 26 26 C 1.37791 * 119.77698 * 179.97438 * 25 24 6 27 27 C 1.38787 * 120.66657 * 0.02562 * 26 25 24 28 28 C 1.36665 * 120.52765 * 359.95778 * 27 26 25 29 29 C 1.39587 * 119.76331 * 0.04428 * 28 27 26 30 30 H 0.96705 * 114.00024 * 300.00551 * 1 2 3 31 31 H 1.09001 * 109.47235 * 239.99584 * 2 1 3 32 32 H 1.48502 * 110.00139 * 299.99933 * 3 2 1 33 33 H 1.48499 * 109.99929 * 61.31775 * 3 2 1 34 34 H 1.08007 * 125.02697 * 0.05114 * 5 4 2 35 35 H 1.09005 * 109.47066 * 144.70350 * 7 6 5 36 36 H 1.08999 * 109.47190 * 24.70566 * 7 6 5 37 37 H 0.97007 * 119.99952 * 359.97438 * 10 8 7 38 38 H 1.09000 * 109.46497 * 300.00287 * 13 11 10 39 39 H 1.09002 * 109.47067 * 60.00040 * 13 11 10 40 40 H 1.09001 * 109.46652 * 179.97438 * 14 13 11 41 41 H 1.08992 * 109.47514 * 59.99933 * 14 13 11 42 42 H 1.09002 * 109.47075 * 59.99068 * 22 15 14 43 43 H 1.08996 * 109.47407 * 180.02562 * 22 15 14 44 44 H 1.09001 * 109.47375 * 59.99949 * 23 11 10 45 45 H 1.09002 * 109.47497 * 299.99590 * 23 11 10 46 46 H 1.07999 * 120.11387 * 359.94702 * 25 24 6 47 47 H 1.07999 * 119.67036 * 179.97438 * 26 25 24 48 48 H 1.08000 * 119.73945 * 179.97438 * 27 26 25 49 49 H 1.08003 * 120.12133 * 179.97438 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9312 -0.7104 1.2305 5 6 2.4561 -0.1373 2.3251 6 7 2.8039 -1.0991 3.2342 7 6 3.4095 -0.8405 4.5428 8 6 4.9077 -0.9630 4.4361 9 8 5.4192 -1.2396 3.3717 10 7 5.6792 -0.7663 5.5235 11 6 7.1356 -0.8848 5.4196 12 1 7.3863 -1.6692 4.7054 13 6 7.7230 0.4453 4.9435 14 6 9.2440 0.3212 4.8344 15 6 9.8264 -0.0321 6.2044 16 1 9.5760 0.7522 6.9189 17 8 11.2471 -0.1474 6.1027 18 6 11.9478 1.0759 6.3367 19 9 11.6623 1.5375 7.6261 20 9 13.3239 0.8558 6.2146 21 9 11.5430 2.0319 5.3989 22 6 9.2391 -1.3622 6.6807 23 6 7.7176 -1.2379 6.7899 24 6 2.4945 -2.3458 2.7381 25 6 2.6293 -3.6362 3.2391 26 6 2.2147 -4.7107 2.4827 27 6 1.6632 -4.5193 1.2235 28 6 1.5212 -3.2600 0.7120 29 6 1.9346 -2.1571 1.4611 30 1 -0.3933 0.4418 0.7650 31 1 1.7924 -0.5139 -0.8899 32 1 1.5616 2.4679 -1.2085 33 1 1.5880 2.4585 1.2242 34 1 2.5871 0.9254 2.4662 35 1 3.0362 -1.5660 5.2657 36 1 3.1497 0.1659 4.8709 37 1 5.2700 -0.5454 6.3749 38 1 7.3083 0.6967 3.9673 39 1 7.4723 1.2296 5.6577 40 1 9.6624 1.2687 4.4947 41 1 9.4943 -0.4630 4.1200 42 1 9.4894 -2.1464 5.9662 43 1 9.6536 -1.6137 7.6569 44 1 7.2992 -2.1855 7.1291 45 1 7.4670 -0.4536 7.5042 46 1 3.0580 -3.7956 4.2174 47 1 2.3205 -5.7120 2.8732 48 1 1.3436 -5.3723 0.6433 49 1 1.0916 -3.1186 -0.2688 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17849236_9818708.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 15:04:55 Heat of formation + Delta-G solvation = -207.512084 kcal Electronic energy + Delta-G solvation = -37850.735654 eV Core-core repulsion = 32329.547276 eV Total energy + Delta-G solvation = -5521.188379 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 399.149 amu Computer time = 1.52 seconds Orbital eigenvalues (eV) -51.26123 -49.01713 -48.94277 -42.53306 -41.13840 -40.06097 -38.18993 -38.03279 -37.56862 -34.91865 -34.04485 -31.96980 -31.58557 -30.31100 -30.19472 -28.57127 -26.41053 -25.71518 -24.02578 -23.86989 -23.44128 -22.57231 -21.59269 -21.32695 -20.66388 -20.41943 -19.97180 -19.72785 -18.68605 -18.37883 -17.83850 -17.44567 -17.09818 -16.62186 -16.40649 -16.37295 -16.08786 -16.03933 -15.74443 -15.71653 -15.52167 -15.43429 -15.37262 -15.22801 -15.13325 -15.10185 -14.87170 -14.73938 -14.61649 -14.41862 -14.26086 -14.07147 -13.90540 -13.61955 -13.33450 -13.24004 -12.95697 -12.75147 -12.71018 -12.56495 -12.39840 -12.24610 -12.10853 -11.99791 -11.73541 -11.60290 -11.23625 -11.07327 -10.54062 -10.45034 -10.12778 -9.15598 -8.62704 -4.86703 0.14559 0.64367 0.80653 1.34910 1.42148 1.50852 1.57641 1.69084 1.97195 2.00435 2.23578 2.93874 2.95433 3.04012 3.47943 3.51325 3.53884 3.61595 3.68364 3.72899 3.83949 3.84471 3.89242 3.98256 4.04983 4.07938 4.16582 4.22230 4.24810 4.30509 4.37250 4.47197 4.50235 4.59150 4.63841 4.72079 4.75209 4.79440 4.89866 4.96636 5.03492 5.05792 5.08503 5.14253 5.20033 5.36328 5.45648 5.51242 5.66810 5.73917 5.75575 6.19724 6.24526 6.51998 6.60574 7.19507 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.553 6.553 2 C -0.051 4.051 3 Si 0.764 3.236 4 C -0.216 4.216 5 C 0.075 3.925 6 N -0.465 5.465 7 C 0.086 3.914 8 C 0.493 3.507 9 O -0.566 6.566 10 N -0.707 5.707 11 C 0.144 3.856 12 H 0.065 0.935 13 C -0.118 4.118 14 C -0.143 4.143 15 C 0.079 3.921 16 H 0.098 0.902 17 O -0.376 6.376 18 C 0.596 3.404 19 F -0.174 7.174 20 F -0.150 7.150 21 F -0.176 7.176 22 C -0.109 4.109 23 C -0.112 4.112 24 C 0.092 3.908 25 C -0.133 4.133 26 C -0.108 4.108 27 C -0.154 4.154 28 C -0.089 4.089 29 C -0.116 4.116 30 H 0.384 0.616 31 H 0.102 0.898 32 H -0.303 1.303 33 H -0.258 1.258 34 H 0.197 0.803 35 H 0.143 0.857 36 H 0.161 0.839 37 H 0.421 0.579 38 H 0.058 0.942 39 H 0.088 0.912 40 H 0.075 0.925 41 H 0.067 0.933 42 H 0.073 0.927 43 H 0.092 0.908 44 H 0.094 0.906 45 H 0.098 0.902 46 H 0.134 0.866 47 H 0.145 0.855 48 H 0.135 0.865 49 H 0.117 0.883 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.616 1.882 9.334 9.542 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.361 6.361 2 C -0.159 4.159 3 Si 0.667 3.333 4 C -0.223 4.223 5 C -0.051 4.051 6 N -0.148 5.148 7 C -0.038 4.038 8 C 0.278 3.722 9 O -0.443 6.443 10 N -0.360 5.360 11 C 0.039 3.961 12 H 0.084 0.916 13 C -0.157 4.157 14 C -0.181 4.181 15 C 0.023 3.977 16 H 0.116 0.884 17 O -0.301 6.301 18 C 0.504 3.496 19 F -0.156 7.156 20 F -0.132 7.132 21 F -0.158 7.158 22 C -0.147 4.147 23 C -0.150 4.150 24 C -0.013 4.013 25 C -0.153 4.153 26 C -0.127 4.127 27 C -0.173 4.173 28 C -0.107 4.107 29 C -0.120 4.120 30 H 0.233 0.767 31 H 0.120 0.880 32 H -0.231 1.231 33 H -0.183 1.183 34 H 0.214 0.786 35 H 0.160 0.840 36 H 0.179 0.821 37 H 0.259 0.741 38 H 0.077 0.923 39 H 0.106 0.894 40 H 0.093 0.907 41 H 0.086 0.914 42 H 0.091 0.909 43 H 0.111 0.889 44 H 0.112 0.888 45 H 0.116 0.884 46 H 0.152 0.848 47 H 0.163 0.837 48 H 0.153 0.847 49 H 0.135 0.865 Dipole moment (debyes) X Y Z Total from point charges -0.135 2.142 8.319 8.591 hybrid contribution -0.891 0.019 0.287 0.936 sum -1.026 2.161 8.606 8.932 Atomic orbital electron populations 1.86564 1.19087 1.80593 1.49867 1.24578 0.82811 1.11620 0.96914 0.94056 0.90436 0.71125 0.77656 1.20701 1.11453 0.91879 0.98312 1.22004 0.99197 0.95161 0.88697 1.43422 1.51833 1.03748 1.15761 1.21991 0.89012 1.08893 0.83901 1.21362 0.90366 0.76368 0.84115 1.90816 1.75649 1.48106 1.29757 1.45824 1.06483 1.71311 1.12432 1.20976 0.79310 0.97307 0.98495 0.91640 1.21787 0.93283 0.98132 1.02449 1.22114 0.96385 1.03104 0.96525 1.22871 0.74465 1.01805 0.98515 0.88399 1.88380 1.23565 1.27764 1.90354 1.19551 0.77224 0.78462 0.74357 1.93261 1.93352 1.89308 1.39701 1.93266 1.29349 1.94734 1.95824 1.93262 1.90378 1.66027 1.66111 1.21573 0.95296 0.94499 1.03372 1.21738 0.93067 1.04745 0.95461 1.18388 1.01509 0.87038 0.94391 1.20247 1.04585 0.89044 1.01458 1.21131 0.98171 0.99058 0.94319 1.20915 1.02386 0.96997 0.97022 1.20448 0.99120 0.91755 0.99423 1.19339 1.04054 0.93785 0.94868 0.76740 0.87975 1.23068 1.18322 0.78618 0.83960 0.82124 0.74062 0.92287 0.89375 0.90684 0.91381 0.90866 0.88921 0.88761 0.88351 0.84791 0.83709 0.84689 0.86463 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -3.58 12.88 -148.98 -1.92 -5.49 16 2 C -0.05 -0.20 3.06 71.24 0.22 0.01 16 3 Si 0.76 -0.42 30.83 68.60 2.11 1.70 16 4 C -0.22 -1.13 5.57 -18.62 -0.10 -1.24 16 5 C 0.08 0.04 9.89 83.00 0.82 0.86 16 6 N -0.47 -0.23 2.27 -519.98 -1.18 -1.41 16 7 C 0.09 -0.77 6.48 85.63 0.56 -0.21 16 8 C 0.49 -1.84 7.86 87.66 0.69 -1.15 16 9 O -0.57 -4.49 16.08 -3.03 -0.05 -4.54 16 10 N -0.71 7.26 5.08 -442.54 -2.25 5.01 16 11 C 0.14 -1.02 2.45 44.99 0.11 -0.91 16 12 H 0.07 -0.03 7.58 -2.39 -0.02 -0.05 16 13 C -0.12 0.68 5.49 30.60 0.17 0.85 16 14 C -0.14 0.48 5.39 30.59 0.17 0.65 16 15 C 0.08 -0.37 2.40 30.60 0.07 -0.30 16 16 H 0.10 -0.73 7.20 -2.39 -0.02 -0.75 16 17 O -0.38 -0.19 10.24 -148.98 -1.53 -1.72 16 18 C 0.60 0.67 3.71 113.37 0.42 1.09 16 19 F -0.17 -0.05 16.61 44.97 0.75 0.70 16 20 F -0.15 -0.56 17.53 44.97 0.79 0.23 16 21 F -0.18 -0.24 15.44 44.97 0.69 0.46 16 22 C -0.11 0.85 5.58 30.61 0.17 1.02 16 23 C -0.11 1.32 5.39 30.61 0.17 1.48 16 24 C 0.09 0.58 6.80 39.03 0.27 0.85 16 25 C -0.13 -0.57 10.00 22.37 0.22 -0.35 16 26 C -0.11 -0.47 10.01 22.30 0.22 -0.24 16 27 C -0.15 -0.98 9.97 22.03 0.22 -0.76 16 28 C -0.09 -0.83 10.05 22.23 0.22 -0.61 16 29 C -0.12 -1.09 6.35 -20.20 -0.13 -1.22 16 30 H 0.38 -0.12 8.70 -74.05 -0.64 -0.76 16 31 H 0.10 0.54 7.96 -2.39 -0.02 0.52 16 32 H -0.30 -2.21 7.11 99.48 0.71 -1.50 16 33 H -0.26 0.23 6.99 99.48 0.70 0.92 16 34 H 0.20 -1.25 6.27 -2.91 -0.02 -1.27 16 35 H 0.14 -1.95 8.14 -2.38 -0.02 -1.97 16 36 H 0.16 -2.70 8.12 -2.39 -0.02 -2.72 16 37 H 0.42 -7.52 8.60 -92.70 -0.80 -8.31 16 38 H 0.06 -0.06 8.14 -2.39 -0.02 -0.08 16 39 H 0.09 -0.83 8.14 -2.39 -0.02 -0.84 16 40 H 0.07 -0.15 6.50 -2.39 -0.02 -0.17 16 41 H 0.07 -0.03 8.14 -2.39 -0.02 -0.05 16 42 H 0.07 -0.38 8.14 -2.39 -0.02 -0.40 16 43 H 0.09 -0.82 8.14 -2.39 -0.02 -0.84 16 44 H 0.09 -1.21 8.14 -2.39 -0.02 -1.23 16 45 H 0.10 -1.53 8.14 -2.39 -0.02 -1.55 16 46 H 0.13 -0.11 8.06 -2.91 -0.02 -0.14 16 47 H 0.15 -0.11 8.06 -2.91 -0.02 -0.14 16 48 H 0.14 0.33 8.06 -2.91 -0.02 0.30 16 49 H 0.12 1.01 8.06 -2.91 -0.02 0.98 16 Total: 0.00 -26.80 415.83 1.51 -25.29 By element: Atomic # 1 Polarization: -19.65 SS G_CDS: -0.40 Total: -20.04 kcal Atomic # 6 Polarization: -4.66 SS G_CDS: 4.48 Total: -0.18 kcal Atomic # 7 Polarization: 7.03 SS G_CDS: -3.43 Total: 3.60 kcal Atomic # 8 Polarization: -8.26 SS G_CDS: -3.49 Total: -11.75 kcal Atomic # 9 Polarization: -0.84 SS G_CDS: 2.23 Total: 1.39 kcal Atomic # 14 Polarization: -0.42 SS G_CDS: 2.11 Total: 1.70 kcal Total: -26.80 1.51 -25.29 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17849236_9818708.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -182.219 kcal (2) G-P(sol) polarization free energy of solvation -26.803 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -209.021 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.509 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.293 kcal (6) G-S(sol) free energy of system = (1) + (5) -207.512 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.52 seconds