Wall clock time and date at job start Sun Mar 7 2021 15:04:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.36770 * 125.79845 * 2 1 4 4 C 1.47258 * 126.94418 * 359.97438 * 3 2 1 5 5 O 1.21635 * 119.99960 * 359.97438 * 4 3 2 6 6 N 1.34776 * 120.00077 * 180.02562 * 4 3 2 7 7 C 1.46501 * 120.00174 * 179.97438 * 6 4 3 8 8 H 1.09003 * 109.46947 * 325.00115 * 7 6 4 9 9 C 1.53004 * 109.47045 * 84.99824 * 7 6 4 10 10 C 1.53001 * 109.47143 * 180.02562 * 9 7 6 11 11 C 1.53007 * 109.46805 * 299.99656 * 10 9 7 12 12 H 1.08991 * 109.47200 * 300.00436 * 11 10 9 13 13 O 1.42895 * 109.47095 * 179.97438 * 11 10 9 14 14 C 1.42897 * 113.99850 * 90.00062 * 13 11 10 15 15 F 1.39908 * 109.47019 * 60.00340 * 14 13 11 16 16 F 1.39904 * 109.47568 * 180.02562 * 14 13 11 17 17 F 1.39901 * 109.47537 * 300.00313 * 14 13 11 18 18 C 1.53004 * 109.46990 * 60.00250 * 11 10 9 19 19 C 1.52997 * 109.47218 * 205.00042 * 7 6 4 20 20 C 1.46685 * 106.11339 * 179.77128 * 3 2 1 21 21 C 1.34486 * 106.33423 * 0.33506 * 20 3 2 22 22 C 1.50696 * 125.57378 * 179.97438 * 21 20 3 23 23 O 1.42903 * 109.47278 * 299.72170 * 22 21 20 24 24 Si 1.86300 * 109.47355 * 179.72044 * 22 21 20 25 25 N 1.34653 * 125.80229 * 179.97438 * 2 1 3 26 26 H 1.09004 * 109.47453 * 270.00267 * 1 2 3 27 27 H 1.08999 * 109.47284 * 30.00341 * 1 2 3 28 28 H 1.09005 * 109.47053 * 150.00008 * 1 2 3 29 29 H 0.96997 * 120.00182 * 359.97438 * 6 4 3 30 30 H 1.08999 * 109.46812 * 299.99830 * 9 7 6 31 31 H 1.08991 * 109.46997 * 59.99890 * 9 7 6 32 32 H 1.09001 * 109.47243 * 180.02562 * 10 9 7 33 33 H 1.09002 * 109.47532 * 59.99337 * 10 9 7 34 34 H 1.08997 * 109.46972 * 179.97438 * 18 11 10 35 35 H 1.09003 * 109.47010 * 59.99623 * 18 11 10 36 36 H 1.09004 * 109.46886 * 299.99479 * 19 7 6 37 37 H 1.08999 * 109.47562 * 60.00139 * 19 7 6 38 38 H 1.08000 * 126.83808 * 180.24377 * 20 3 2 39 39 H 1.08997 * 109.47214 * 59.72146 * 22 21 20 40 40 H 0.96700 * 114.00022 * 180.02562 * 23 22 21 41 41 H 1.48506 * 110.00048 * 298.68478 * 24 22 21 42 42 H 1.48502 * 109.99996 * 59.99803 * 24 22 21 43 43 H 0.97003 * 124.85112 * 0.05212 * 25 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3070 1.1093 0.0000 4 6 1.8701 2.5156 -0.0005 5 8 0.6838 2.7839 -0.0015 6 7 2.7849 3.5054 -0.0010 7 6 2.3503 4.9045 -0.0021 8 1 1.4387 5.0013 -0.5918 9 6 2.0785 5.3552 1.4346 10 6 1.6240 6.8162 1.4334 11 6 2.7211 7.6910 0.8234 12 1 3.6326 7.5945 1.4130 13 8 2.2964 9.0554 0.8217 14 6 2.6499 9.7756 2.0042 15 9 4.0413 9.7764 2.1513 16 9 2.1905 11.0931 1.9028 17 9 2.0639 9.1621 3.1166 18 6 2.9928 7.2403 -0.6133 19 6 3.4476 5.7789 -0.6120 20 6 3.6881 0.6152 0.0056 21 6 3.6095 -0.7273 0.0010 22 6 4.7819 -1.6742 0.0035 23 8 5.5778 -1.4501 -1.1620 24 14 4.1616 -3.4308 0.0035 25 7 2.2947 -1.0921 0.0005 26 1 -0.3634 0.0000 1.0277 27 1 -0.3634 0.8899 -0.5139 28 1 -0.3633 -0.8900 -0.5139 29 1 3.7310 3.2915 -0.0006 30 1 1.2967 4.7322 1.8690 31 1 2.9900 5.2583 2.0243 32 1 1.4308 7.1374 2.4570 33 1 0.7124 6.9127 0.8437 34 1 3.7740 7.8638 -1.0481 35 1 2.0812 7.3367 -1.2030 36 1 4.3591 5.6821 -0.0222 37 1 3.6412 5.4579 -1.6355 38 1 4.5889 1.2109 0.0108 39 1 5.3859 -1.5022 0.8944 40 1 6.3516 -2.0263 -1.2267 41 1 3.3587 -3.6860 1.2265 42 1 3.3365 -3.6781 -1.2062 43 1 1.9733 -2.0073 0.0002 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17849236_9865296.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 15:04:59 Heat of formation + Delta-G solvation = -239.189922 kcal Electronic energy + Delta-G solvation = -31220.330487 eV Core-core repulsion = 26237.984495 eV Total energy + Delta-G solvation = -4982.345992 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 349.133 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -51.26108 -49.01550 -48.94326 -42.59547 -40.99473 -39.87349 -37.91202 -37.61934 -34.87003 -32.98492 -32.39373 -31.97578 -29.97256 -28.97012 -26.46847 -25.57867 -24.09944 -23.90594 -22.67094 -21.62792 -21.38275 -20.65826 -20.32646 -19.97110 -19.68630 -18.53314 -18.14818 -17.61527 -17.07407 -16.69555 -16.37826 -16.12296 -15.88086 -15.73803 -15.61470 -15.47794 -15.38128 -15.28597 -15.17638 -15.13218 -15.06538 -14.70056 -14.58279 -14.49585 -14.29020 -14.22898 -13.89615 -13.83801 -13.57821 -13.33658 -12.97364 -12.93888 -12.73591 -12.50906 -12.25348 -12.12758 -12.10417 -11.60137 -11.22095 -10.96586 -10.38174 -10.20596 -9.90413 -9.24405 -5.12233 0.57913 0.80276 1.08113 1.21481 1.55118 1.79808 1.81657 2.00409 2.32499 2.45367 2.93974 3.03830 3.40856 3.48190 3.51529 3.67396 3.81497 3.84700 3.87029 3.94357 4.04985 4.08227 4.09012 4.25156 4.36270 4.39785 4.45850 4.46878 4.57007 4.63772 4.67032 4.75285 4.89311 4.95250 5.02511 5.04278 5.06157 5.16075 5.20856 5.36692 5.52838 5.60897 5.74688 6.18985 6.60988 6.90457 7.30093 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.095 4.095 2 C 0.107 3.893 3 C -0.260 4.260 4 C 0.590 3.410 5 O -0.583 6.583 6 N -0.710 5.710 7 C 0.144 3.856 8 H 0.071 0.929 9 C -0.118 4.118 10 C -0.141 4.141 11 C 0.080 3.920 12 H 0.097 0.903 13 O -0.374 6.374 14 C 0.596 3.404 15 F -0.174 7.174 16 F -0.149 7.149 17 F -0.176 7.176 18 C -0.107 4.107 19 C -0.113 4.113 20 C -0.129 4.129 21 C 0.000 4.000 22 C -0.045 4.045 23 O -0.561 6.561 24 Si 0.772 3.228 25 N -0.551 5.551 26 H 0.085 0.915 27 H 0.087 0.913 28 H 0.083 0.917 29 H 0.413 0.587 30 H 0.055 0.945 31 H 0.082 0.918 32 H 0.075 0.925 33 H 0.072 0.928 34 H 0.094 0.906 35 H 0.076 0.924 36 H 0.094 0.906 37 H 0.092 0.908 38 H 0.168 0.832 39 H 0.110 0.890 40 H 0.407 0.593 41 H -0.282 1.282 42 H -0.295 1.295 43 H 0.414 0.586 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.608 -6.535 0.195 10.032 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C -0.011 4.011 3 C -0.270 4.270 4 C 0.380 3.620 5 O -0.465 6.465 6 N -0.361 5.361 7 C 0.039 3.961 8 H 0.089 0.911 9 C -0.157 4.157 10 C -0.179 4.179 11 C 0.024 3.976 12 H 0.115 0.885 13 O -0.299 6.299 14 C 0.504 3.496 15 F -0.156 7.156 16 F -0.131 7.131 17 F -0.158 7.158 18 C -0.145 4.145 19 C -0.151 4.151 20 C -0.153 4.153 21 C -0.108 4.108 22 C -0.156 4.156 23 O -0.371 6.371 24 Si 0.677 3.323 25 N -0.151 5.151 26 H 0.104 0.896 27 H 0.106 0.894 28 H 0.101 0.899 29 H 0.250 0.750 30 H 0.074 0.926 31 H 0.101 0.899 32 H 0.094 0.906 33 H 0.091 0.909 34 H 0.113 0.887 35 H 0.095 0.905 36 H 0.113 0.887 37 H 0.110 0.890 38 H 0.186 0.814 39 H 0.127 0.873 40 H 0.259 0.741 41 H -0.209 1.209 42 H -0.223 1.223 43 H 0.254 0.746 Dipole moment (debyes) X Y Z Total from point charges 5.576 -6.460 -0.036 8.534 hybrid contribution -0.123 0.132 0.470 0.503 sum 5.453 -6.328 0.434 8.365 Atomic orbital electron populations 1.20609 0.86061 1.04507 1.04081 1.20650 0.94431 0.85617 1.00427 1.20261 0.94096 0.91897 1.20727 1.17484 0.85108 0.84700 0.74688 1.90733 1.18074 1.84866 1.52839 1.45673 1.10115 1.05159 1.75112 1.21023 0.98781 0.79938 0.96314 0.91105 1.21786 1.02294 0.94480 0.97129 1.22107 0.98873 0.94726 1.02186 1.22839 0.98118 0.75838 1.00762 0.88511 1.88371 1.79047 1.27308 1.35128 1.19555 0.74368 0.77282 0.78406 1.93262 1.30518 1.96273 1.95574 1.93267 1.89109 1.34772 1.95924 1.93261 1.84381 1.82997 1.55200 1.21553 1.03774 0.96229 0.92902 1.21737 0.97991 0.92168 1.03224 1.22023 0.95567 0.92757 1.04936 1.19832 0.83874 0.95307 1.11756 1.24091 0.92294 1.06803 0.92417 1.86448 1.43175 1.65518 1.41972 0.93564 0.85320 0.76997 0.76467 1.41841 1.05897 1.08417 1.58941 0.89641 0.89437 0.89869 0.75037 0.92576 0.89934 0.90613 0.90936 0.88698 0.90502 0.88744 0.88964 0.81432 0.87268 0.74083 1.20885 1.22255 0.74607 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -0.35 9.88 71.24 0.70 0.35 16 2 C 0.11 0.65 7.17 41.78 0.30 0.95 16 3 C -0.26 -1.76 6.29 -19.04 -0.12 -1.88 16 4 C 0.59 4.83 7.77 86.61 0.67 5.50 16 5 O -0.58 -8.60 14.47 -4.14 -0.06 -8.66 16 6 N -0.71 -0.61 5.07 -445.94 -2.26 -2.87 16 7 C 0.14 -0.03 2.45 44.99 0.11 0.08 16 8 H 0.07 0.34 7.58 -2.39 -0.02 0.32 16 9 C -0.12 -0.02 5.49 30.60 0.17 0.15 16 10 C -0.14 -0.04 5.39 30.60 0.17 0.13 16 11 C 0.08 -0.12 2.40 30.60 0.07 -0.04 16 12 H 0.10 -0.39 7.20 -2.39 -0.02 -0.40 16 13 O -0.37 -1.01 10.23 -148.98 -1.52 -2.53 16 14 C 0.60 1.85 3.71 113.37 0.42 2.27 16 15 F -0.17 -0.42 16.62 44.97 0.75 0.33 16 16 F -0.15 -0.78 17.53 44.97 0.79 0.01 16 17 F -0.18 -0.62 15.44 44.97 0.69 0.08 16 18 C -0.11 0.45 5.57 30.61 0.17 0.62 16 19 C -0.11 0.68 5.39 30.61 0.17 0.84 16 20 C -0.13 -0.35 10.44 23.62 0.25 -0.10 16 21 C 0.00 0.00 6.14 40.98 0.25 0.25 16 22 C -0.05 0.21 2.97 71.23 0.21 0.42 16 23 O -0.56 2.44 12.84 -148.98 -1.91 0.53 16 24 Si 0.77 -4.92 30.94 68.60 2.12 -2.79 16 25 N -0.55 -1.68 5.41 -171.08 -0.93 -2.61 16 26 H 0.09 0.21 8.14 -2.39 -0.02 0.19 16 27 H 0.09 0.69 6.46 -2.39 -0.02 0.67 16 28 H 0.08 -0.05 8.14 -2.38 -0.02 -0.07 16 29 H 0.41 -1.81 7.73 -92.71 -0.72 -2.53 16 30 H 0.06 0.30 8.14 -2.39 -0.02 0.28 16 31 H 0.08 -0.22 8.14 -2.39 -0.02 -0.24 16 32 H 0.08 0.09 6.50 -2.39 -0.02 0.07 16 33 H 0.07 0.17 8.14 -2.39 -0.02 0.15 16 34 H 0.09 -0.56 8.14 -2.39 -0.02 -0.58 16 35 H 0.08 -0.19 8.14 -2.39 -0.02 -0.21 16 36 H 0.09 -0.88 8.14 -2.39 -0.02 -0.90 16 37 H 0.09 -0.63 8.14 -2.39 -0.02 -0.64 16 38 H 0.17 -0.41 7.70 -2.91 -0.02 -0.43 16 39 H 0.11 -1.02 7.96 -2.39 -0.02 -1.04 16 40 H 0.41 -6.10 8.74 -74.06 -0.65 -6.75 16 41 H -0.28 0.41 7.11 99.48 0.71 1.12 16 42 H -0.30 -0.37 7.11 99.48 0.71 0.34 16 43 H 0.41 -0.08 6.70 -92.71 -0.62 -0.70 16 Total: 0.00 -20.69 363.71 0.35 -20.34 By element: Atomic # 1 Polarization: -10.50 SS G_CDS: -0.85 Total: -11.35 kcal Atomic # 6 Polarization: 6.00 SS G_CDS: 3.54 Total: 9.54 kcal Atomic # 7 Polarization: -2.29 SS G_CDS: -3.19 Total: -5.48 kcal Atomic # 8 Polarization: -7.16 SS G_CDS: -3.50 Total: -10.66 kcal Atomic # 9 Polarization: -1.81 SS G_CDS: 2.23 Total: 0.42 kcal Atomic # 14 Polarization: -4.92 SS G_CDS: 2.12 Total: -2.79 kcal Total: -20.69 0.35 -20.34 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17849236_9865296.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -218.853 kcal (2) G-P(sol) polarization free energy of solvation -20.690 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -239.543 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.353 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.337 kcal (6) G-S(sol) free energy of system = (1) + (5) -239.190 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds