Wall clock time and date at job start Sun Mar 7 2021 15:05:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 C 1.33871 * 124.19290 * 2 1 4 4 O 1.21536 * 123.79013 * 359.97438 * 3 2 1 5 5 N 1.34670 * 112.41891 * 180.02562 * 3 2 1 6 6 C 1.46860 * 106.42522 * 0.02562 * 5 3 2 7 7 C 1.52473 * 110.47735 * 118.54351 * 6 5 3 8 8 C 1.53082 * 109.58789 * 181.30160 * 7 6 5 9 9 C 1.53013 * 109.42022 * 300.85237 * 8 7 6 10 10 N 1.46502 * 109.46585 * 180.49621 * 9 8 7 11 11 C 1.34781 * 119.99893 * 155.00186 * 10 9 8 12 12 O 1.21695 * 119.99808 * 359.97438 * 11 10 9 13 13 C 1.46672 * 119.99848 * 179.97438 * 11 10 9 14 14 C 1.37867 * 126.23323 * 180.32579 * 13 11 10 15 15 C 1.39837 * 107.08803 * 180.11857 * 14 13 11 16 16 C 1.50693 * 126.07117 * 179.83783 * 15 14 13 17 17 O 1.42907 * 109.47661 * 299.72324 * 16 15 14 18 18 Si 1.86298 * 109.47618 * 179.72014 * 16 15 14 19 19 C 1.35449 * 107.86224 * 359.58336 * 15 14 13 20 20 N 1.35533 * 108.87412 * 0.25891 * 19 15 14 21 21 C 1.53013 * 109.49894 * 60.48602 * 9 8 7 22 22 C 1.52469 * 110.48205 * 241.44304 * 6 5 3 23 23 C 1.34915 * 124.19786 * 180.02562 * 2 1 3 24 24 O 1.21231 * 127.25146 * 0.02562 * 23 2 1 25 25 H 1.09002 * 109.47281 * 359.97188 * 1 2 3 26 26 H 1.08999 * 109.46976 * 119.97603 * 1 2 3 27 27 H 1.09002 * 109.46951 * 239.96924 * 1 2 3 28 28 H 0.97000 * 126.78799 * 180.02562 * 5 3 2 29 29 H 1.08996 * 109.45188 * 61.26714 * 7 6 5 30 30 H 1.09000 * 109.45012 * 301.33895 * 7 6 5 31 31 H 1.09003 * 109.47633 * 180.86598 * 8 7 6 32 32 H 1.08995 * 109.47908 * 60.83841 * 8 7 6 33 33 H 1.09004 * 109.46395 * 300.48153 * 9 8 7 34 34 H 0.96997 * 119.99733 * 334.99658 * 10 9 8 35 35 H 1.08005 * 126.45919 * 359.96450 * 14 13 11 36 36 H 1.09000 * 109.46936 * 59.71947 * 16 15 14 37 37 H 0.96697 * 114.00527 * 179.97438 * 17 16 15 38 38 H 1.48506 * 109.99834 * 298.68714 * 18 16 15 39 39 H 1.48502 * 110.00011 * 59.99978 * 18 16 15 40 40 H 1.08006 * 125.56544 * 180.27862 * 19 15 14 41 41 H 0.97002 * 125.68230 * 179.97438 * 20 19 15 42 42 H 1.09001 * 109.47668 * 59.49344 * 21 9 8 43 43 H 1.08992 * 109.48065 * 179.53202 * 21 9 8 44 44 H 1.08997 * 109.45431 * 298.73692 * 22 6 5 45 45 H 1.08998 * 109.45019 * 58.66505 * 22 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2173 1.1073 0.0000 4 8 1.7617 2.2340 -0.0005 5 7 3.5357 0.8325 -0.0006 6 6 3.6548 -0.6312 -0.0016 7 6 4.3780 -1.1067 -1.2569 8 6 4.4621 -2.6352 -1.2529 9 6 5.2140 -3.1000 -0.0039 10 7 5.3055 -4.5622 -0.0051 11 6 6.3019 -5.1756 0.6639 12 8 7.1259 -4.5148 1.2684 13 6 6.3931 -6.6395 0.6632 14 6 7.3496 -7.3966 1.3056 15 6 7.0598 -8.7381 1.0377 16 6 7.8395 -9.9298 1.5303 17 8 9.1825 -9.8531 1.0478 18 14 7.0437 -11.4942 0.9058 19 6 5.9505 -8.7766 0.2613 20 7 5.5355 -7.5079 0.0266 21 6 4.4631 -2.6370 1.2462 22 6 4.3789 -1.1085 1.2524 23 6 2.2233 -1.1159 -0.0005 24 8 1.8376 -2.2652 -0.0014 25 1 -0.3634 1.0277 0.0005 26 1 -0.3633 -0.5135 -0.8902 27 1 -0.3633 -0.5143 0.8897 28 1 4.2629 1.4745 -0.0003 29 1 5.3840 -0.6878 -1.2768 30 1 3.8298 -0.7756 -2.1389 31 1 4.9929 -2.9723 -2.1433 32 1 3.4561 -3.0546 -1.2486 33 1 6.2171 -2.6733 -0.0040 34 1 4.6489 -5.0888 -0.4872 35 1 8.1697 -7.0238 1.9013 36 1 7.8449 -9.9351 2.6203 37 1 9.7435 -10.5895 1.3271 38 1 5.6571 -11.6016 1.4266 39 1 7.0302 -11.4993 -0.5792 40 1 5.4742 -9.6720 -0.1098 41 1 4.7630 -7.2540 -0.5023 42 1 3.4570 -3.0564 1.2420 43 1 4.9945 -2.9754 2.1356 44 1 5.3850 -0.6897 1.2722 45 1 3.8315 -0.7787 2.1354 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17849352_10543058.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 15:05:08 Heat of formation + Delta-G solvation = -51.182808 kcal Electronic energy + Delta-G solvation = -31176.689893 eV Core-core repulsion = 26776.645992 eV Total energy + Delta-G solvation = -4400.043901 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 349.152 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -43.90238 -42.49379 -40.75000 -39.83827 -38.73852 -37.58471 -37.16854 -36.03172 -34.26681 -32.68562 -32.33055 -30.98769 -29.63937 -29.06319 -26.51420 -25.32819 -24.33009 -24.07683 -23.02023 -22.46444 -21.24243 -20.88945 -20.44525 -19.67468 -19.18763 -18.27462 -18.07315 -17.79888 -17.36394 -17.10250 -16.72923 -16.53772 -16.32069 -15.92375 -15.79074 -15.41983 -15.10835 -15.08188 -15.04052 -14.70268 -14.55936 -14.35855 -14.18059 -14.02886 -13.89550 -13.84108 -13.65890 -13.61021 -13.34298 -12.98826 -12.51671 -12.46663 -12.32292 -11.98352 -11.93842 -11.82947 -11.12711 -10.98300 -10.91297 -10.59993 -10.32533 -10.24333 -9.87499 -9.31397 -5.00751 0.39007 0.44307 1.07250 1.29525 1.47727 1.67717 1.86230 1.87387 1.92070 1.96435 2.01410 2.36629 2.69520 3.18246 3.21618 3.52367 3.54176 3.73883 3.78165 3.82754 3.85169 3.94826 4.01686 4.06752 4.11676 4.21728 4.26417 4.30272 4.36321 4.38061 4.41628 4.55974 4.61098 4.63408 4.67145 4.80585 4.82093 4.86345 4.98466 5.05349 5.10059 5.31896 5.57969 5.62609 5.78214 5.87692 6.17235 6.21731 6.39488 6.74880 6.99067 7.10333 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.084 3.916 2 N -0.580 5.580 3 C 0.702 3.298 4 O -0.538 6.538 5 N -0.719 5.719 6 C 0.121 3.879 7 C -0.107 4.107 8 C -0.136 4.136 9 C 0.151 3.849 10 N -0.727 5.727 11 C 0.594 3.406 12 O -0.522 6.522 13 C -0.058 4.058 14 C -0.071 4.071 15 C -0.165 4.165 16 C -0.036 4.036 17 O -0.547 6.547 18 Si 0.685 3.315 19 C 0.027 3.973 20 N -0.534 5.534 21 C -0.138 4.138 22 C -0.109 4.109 23 C 0.532 3.468 24 O -0.456 6.456 25 H 0.099 0.901 26 H 0.079 0.921 27 H 0.079 0.921 28 H 0.442 0.558 29 H 0.093 0.907 30 H 0.081 0.919 31 H 0.082 0.918 32 H 0.087 0.913 33 H 0.095 0.905 34 H 0.395 0.605 35 H 0.153 0.847 36 H 0.071 0.929 37 H 0.380 0.620 38 H -0.257 1.257 39 H -0.253 1.253 40 H 0.167 0.833 41 H 0.419 0.581 42 H 0.084 0.916 43 H 0.081 0.919 44 H 0.092 0.908 45 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.601 -4.739 -1.240 4.935 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 N -0.327 5.327 3 C 0.402 3.598 4 O -0.411 6.411 5 N -0.383 5.383 6 C 0.030 3.970 7 C -0.146 4.146 8 C -0.174 4.174 9 C 0.046 3.954 10 N -0.378 5.378 11 C 0.381 3.619 12 O -0.397 6.397 13 C -0.170 4.170 14 C -0.097 4.097 15 C -0.172 4.172 16 C -0.148 4.148 17 O -0.353 6.353 18 Si 0.587 3.413 19 C -0.109 4.109 20 N -0.130 5.130 21 C -0.177 4.177 22 C -0.148 4.148 23 C 0.319 3.681 24 O -0.325 6.325 25 H 0.117 0.883 26 H 0.097 0.903 27 H 0.098 0.902 28 H 0.287 0.713 29 H 0.111 0.889 30 H 0.100 0.900 31 H 0.101 0.899 32 H 0.106 0.894 33 H 0.113 0.887 34 H 0.229 0.771 35 H 0.171 0.829 36 H 0.089 0.911 37 H 0.227 0.773 38 H -0.182 1.182 39 H -0.178 1.178 40 H 0.184 0.816 41 H 0.256 0.744 42 H 0.102 0.898 43 H 0.100 0.900 44 H 0.110 0.890 45 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges -1.613 -3.960 -1.628 4.575 hybrid contribution -0.584 0.652 -0.373 0.952 sum -2.197 -3.307 -2.001 4.446 Atomic orbital electron populations 1.21913 0.74689 1.05411 1.03667 1.46349 1.09815 1.07981 1.68591 1.15942 0.82222 0.84180 0.77442 1.91049 1.75144 1.20263 1.54634 1.45598 1.06707 1.07040 1.78926 1.21173 0.94545 0.81487 0.99833 1.21588 1.01902 0.96119 0.94995 1.21942 1.02699 0.94801 0.97967 1.20968 1.00595 0.79261 0.94540 1.45883 1.30157 1.07683 1.54069 1.16993 0.81006 0.85082 0.78786 1.90871 1.40629 1.64895 1.43352 1.20418 0.98391 0.89739 1.08452 1.21198 0.97970 0.91013 0.99545 1.18808 0.98338 0.94323 1.05705 1.23971 0.86977 1.03133 1.00687 1.86513 1.20745 1.51168 1.76834 0.95114 0.82057 0.82855 0.81320 1.21655 0.99139 0.87289 1.02842 1.41862 1.24440 1.05760 1.40952 1.22068 1.02637 0.93945 0.99059 1.21622 1.01684 0.96748 0.94718 1.20643 0.88067 0.84911 0.74479 1.90752 1.78950 1.17571 1.45243 0.88264 0.90251 0.90241 0.71250 0.88874 0.89999 0.89925 0.89434 0.88688 0.77148 0.82947 0.91081 0.77299 1.18185 1.17776 0.81622 0.74357 0.89793 0.89995 0.88957 0.90223 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 -0.10 10.89 59.85 0.65 0.56 16 2 N -0.58 -0.29 3.01 -128.24 -0.39 -0.68 16 3 C 0.70 1.11 8.63 -87.82 -0.76 0.36 16 4 O -0.54 -2.82 17.24 5.33 0.09 -2.73 16 5 N -0.72 1.20 5.88 -53.87 -0.32 0.88 16 6 C 0.12 -0.24 1.01 -133.11 -0.13 -0.38 16 7 C -0.11 0.35 5.10 -26.96 -0.14 0.21 16 8 C -0.14 0.39 5.14 -26.68 -0.14 0.25 16 9 C 0.15 -0.20 2.44 -67.92 -0.17 -0.36 16 10 N -0.73 0.64 5.07 -55.10 -0.28 0.36 16 11 C 0.59 1.47 7.75 -12.85 -0.10 1.37 16 12 O -0.52 -3.11 16.55 5.19 0.09 -3.03 16 13 C -0.06 -0.12 7.06 -81.98 -0.58 -0.70 16 14 C -0.07 -0.25 10.59 -39.12 -0.41 -0.66 16 15 C -0.16 -0.38 5.47 -105.02 -0.57 -0.95 16 16 C -0.04 0.00 3.01 36.00 0.11 0.10 16 17 O -0.55 -0.42 12.86 -35.23 -0.45 -0.87 16 18 Si 0.69 -1.16 30.59 -169.99 -5.20 -6.36 16 19 C 0.03 0.02 10.45 -16.91 -0.18 -0.16 16 20 N -0.53 0.32 5.99 -9.39 -0.06 0.26 16 21 C -0.14 0.12 5.25 -26.68 -0.14 -0.02 16 22 C -0.11 0.23 5.10 -26.96 -0.14 0.10 16 23 C 0.53 0.05 6.53 -10.71 -0.07 -0.02 16 24 O -0.46 -0.70 13.94 5.60 0.08 -0.63 16 25 H 0.10 -0.09 7.45 -51.93 -0.39 -0.48 16 26 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 27 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 28 H 0.44 -1.61 8.96 -40.82 -0.37 -1.98 16 29 H 0.09 -0.42 8.14 -51.93 -0.42 -0.84 16 30 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 31 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 32 H 0.09 -0.17 6.11 -51.93 -0.32 -0.49 16 33 H 0.10 -0.02 7.58 -51.93 -0.39 -0.42 16 34 H 0.39 -1.28 7.73 -40.82 -0.32 -1.60 16 35 H 0.15 0.58 8.06 -52.48 -0.42 0.16 16 36 H 0.07 -0.08 7.96 -51.93 -0.41 -0.49 16 37 H 0.38 -1.67 8.74 45.56 0.40 -1.27 16 38 H -0.26 -0.11 7.11 56.52 0.40 0.29 16 39 H -0.25 -0.33 7.11 56.52 0.40 0.08 16 40 H 0.17 -0.20 6.19 -52.48 -0.32 -0.53 16 41 H 0.42 -1.71 8.19 -40.82 -0.33 -2.04 16 42 H 0.08 0.01 6.11 -51.93 -0.32 -0.31 16 43 H 0.08 0.06 8.14 -51.93 -0.42 -0.36 16 44 H 0.09 -0.30 8.14 -51.93 -0.42 -0.72 16 45 H 0.08 -0.13 8.14 -51.93 -0.42 -0.56 16 LS Contribution 367.97 15.07 5.55 5.55 Total: 0.00 -12.24 367.97 -9.43 -21.66 By element: Atomic # 1 Polarization: -8.35 SS G_CDS: -5.77 Total: -14.12 kcal Atomic # 6 Polarization: 2.46 SS G_CDS: -2.76 Total: -0.30 kcal Atomic # 7 Polarization: 1.86 SS G_CDS: -1.04 Total: 0.82 kcal Atomic # 8 Polarization: -7.05 SS G_CDS: -0.20 Total: -7.25 kcal Atomic # 14 Polarization: -1.16 SS G_CDS: -5.20 Total: -6.36 kcal Total LS contribution 5.55 Total: 5.55 kcal Total: -12.24 -9.43 -21.66 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17849352_10543058.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -29.519 kcal (2) G-P(sol) polarization free energy of solvation -12.237 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -41.757 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.426 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.663 kcal (6) G-S(sol) free energy of system = (1) + (5) -51.183 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds