Wall clock time and date at job start Sun Mar 7 2021 15:05:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 C 1.33867 * 124.19633 * 2 1 4 4 O 1.21543 * 123.78599 * 359.96086 * 3 2 1 5 5 N 1.34668 * 112.42206 * 179.69629 * 3 2 1 6 6 C 1.46846 * 106.41786 * 0.26707 * 5 3 2 7 7 C 1.52478 * 110.48962 * 241.43435 * 6 5 3 8 8 C 1.53092 * 109.52036 * 296.01925 * 7 6 5 9 9 C 1.53001 * 109.41823 * 300.83810 * 8 7 6 10 10 N 1.46503 * 109.45383 * 180.42614 * 9 8 7 11 11 C 1.34775 * 119.99991 * 84.89768 * 10 9 8 12 12 O 1.21700 * 120.00028 * 354.95978 * 11 10 9 13 13 C 1.46682 * 120.00103 * 174.96407 * 11 10 9 14 14 C 1.37873 * 126.23164 * 4.95849 * 13 11 10 15 15 C 1.39828 * 107.08562 * 180.02562 * 14 13 11 16 16 C 1.35451 * 107.86609 * 359.97438 * 15 14 13 17 17 C 1.50697 * 125.56518 * 180.02562 * 16 15 14 18 18 O 1.42902 * 109.47172 * 149.98032 * 17 16 15 19 19 Si 1.86300 * 109.47138 * 29.98211 * 17 16 15 20 20 N 1.35534 * 108.86939 * 359.73717 * 16 15 14 21 21 C 1.46502 * 125.68078 * 180.29866 * 20 16 15 22 22 C 1.53005 * 109.57069 * 60.39708 * 9 8 7 23 23 C 1.52477 * 110.48356 * 118.55508 * 6 5 3 24 24 C 1.34916 * 124.19565 * 180.17804 * 2 1 3 25 25 O 1.21236 * 127.25830 * 0.02562 * 24 2 1 26 26 H 1.09006 * 109.47283 * 0.02562 * 1 2 3 27 27 H 1.08996 * 109.47498 * 120.02657 * 1 2 3 28 28 H 1.09004 * 109.47304 * 240.02858 * 1 2 3 29 29 H 0.97007 * 126.78936 * 180.27176 * 5 3 2 30 30 H 1.09000 * 109.45874 * 56.03422 * 7 6 5 31 31 H 1.09000 * 109.46043 * 176.00580 * 7 6 5 32 32 H 1.08993 * 109.47807 * 180.85069 * 8 7 6 33 33 H 1.09004 * 109.47619 * 60.81891 * 8 7 6 34 34 H 1.08994 * 109.45504 * 300.36305 * 9 8 7 35 35 H 0.97000 * 119.99906 * 264.90452 * 10 9 8 36 36 H 1.08003 * 126.45543 * 359.96259 * 14 13 11 37 37 H 1.08001 * 126.07209 * 179.97438 * 15 14 13 38 38 H 1.08997 * 109.47290 * 269.97763 * 17 16 15 39 39 H 0.96705 * 114.00354 * 179.97438 * 18 17 16 40 40 H 1.48499 * 109.99613 * 298.67656 * 19 17 16 41 41 H 1.48492 * 110.00060 * 59.99933 * 19 17 16 42 42 H 1.09001 * 109.47622 * 275.96176 * 21 20 16 43 43 H 1.09004 * 109.46933 * 35.95964 * 21 20 16 44 44 H 1.08997 * 109.47599 * 155.95747 * 21 20 16 45 45 H 1.08998 * 109.48036 * 179.61828 * 22 9 8 46 46 H 1.08997 * 109.48216 * 59.57794 * 22 9 8 47 47 H 1.09002 * 109.46552 * 183.98562 * 23 6 5 48 48 H 1.08996 * 109.46838 * 303.96528 * 23 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2174 1.1072 0.0000 4 8 1.7617 2.2340 -0.0007 5 7 3.5357 0.8325 0.0066 6 6 3.6546 -0.6312 0.0049 7 6 4.3719 -1.1099 1.2625 8 6 5.8074 -0.5780 1.2664 9 6 6.5388 -1.0788 0.0193 10 7 7.9158 -0.5787 0.0274 11 6 8.8719 -1.2478 0.7016 12 8 8.5755 -2.2150 1.3784 13 6 10.2696 -0.8104 0.6199 14 6 10.7346 0.3158 -0.0252 15 6 12.1218 0.3452 0.1479 16 6 12.4722 -0.7392 0.8800 17 6 13.8744 -1.0973 1.3002 18 8 13.8340 -1.8035 2.5418 19 14 14.8784 0.4589 1.5032 20 7 11.3551 -1.4463 1.1784 21 6 11.3106 -2.6834 1.9619 22 6 5.8205 -0.5737 -1.2337 23 6 4.3850 -1.1057 -1.2466 24 6 2.2233 -1.1159 -0.0035 25 8 1.8377 -2.2653 -0.0075 26 1 -0.3634 1.0277 -0.0005 27 1 -0.3634 -0.5142 -0.8897 28 1 -0.3634 -0.5134 0.8903 29 1 4.2629 1.4744 0.0116 30 1 3.8456 -0.7415 2.1431 31 1 4.3882 -2.1996 1.2786 32 1 6.3241 -0.9330 2.1580 33 1 5.7912 0.5119 1.2651 34 1 6.5488 -2.1687 0.0175 35 1 8.1394 0.2342 -0.4524 36 1 10.1396 1.0386 -0.5638 37 1 12.7945 1.0987 -0.2342 38 1 14.3321 -1.7282 0.5382 39 1 14.7036 -2.0665 2.8733 40 1 14.9547 1.1862 0.2108 41 1 14.2647 1.3275 2.5395 42 1 11.5227 -3.5327 1.3125 43 1 12.0565 -2.6378 2.7556 44 1 10.3198 -2.8002 2.4008 45 1 6.3466 -0.9256 -2.1210 46 1 5.8042 0.5162 -1.2288 47 1 4.4018 -2.1955 -1.2661 48 1 3.8682 -0.7346 -2.1315 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17849352_10803936.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 15:05:15 Heat of formation + Delta-G solvation = -47.825890 kcal Electronic energy + Delta-G solvation = -33408.243668 eV Core-core repulsion = 28852.807715 eV Total energy + Delta-G solvation = -4555.435953 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 363.167 amu Computer time = 1.12 seconds Orbital eigenvalues (eV) -43.82265 -42.59210 -40.74197 -39.72152 -39.07016 -37.83349 -36.95313 -36.00760 -34.30513 -33.57678 -32.33214 -31.73728 -30.19588 -28.87332 -27.44972 -26.80646 -25.04537 -24.35441 -23.70274 -22.88304 -21.76509 -21.36815 -21.23577 -20.25379 -19.10245 -18.77510 -18.51028 -17.92719 -17.68591 -17.35660 -16.94848 -16.73704 -16.57864 -16.53017 -16.04308 -15.89628 -15.69830 -15.41286 -15.23510 -15.17393 -14.90169 -14.53845 -14.46002 -14.38130 -13.90909 -13.84326 -13.68191 -13.63069 -13.60017 -13.50934 -13.24787 -13.14897 -12.99101 -12.65138 -12.58506 -12.08688 -11.92478 -11.89548 -11.83650 -11.21923 -10.97179 -10.88209 -10.67522 -10.58460 -10.24388 -9.77477 -9.11362 -5.07700 0.37279 0.50221 1.07139 1.12704 1.48694 1.61750 1.69133 1.92605 1.95703 1.99441 2.28307 2.34128 2.78327 3.00688 3.16413 3.23116 3.48809 3.58652 3.69268 3.77118 3.87250 3.91403 3.98623 3.99990 4.06377 4.23966 4.26128 4.27886 4.29501 4.31420 4.40986 4.44533 4.52330 4.55425 4.61454 4.63073 4.69176 4.73572 4.79600 4.88730 4.94462 4.95857 5.02398 5.07991 5.31987 5.64850 5.65389 5.92670 5.95795 6.12149 6.26728 6.35825 6.39909 7.03385 7.10966 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.084 3.916 2 N -0.580 5.580 3 C 0.702 3.298 4 O -0.540 6.540 5 N -0.716 5.716 6 C 0.122 3.878 7 C -0.110 4.110 8 C -0.128 4.128 9 C 0.146 3.854 10 N -0.717 5.717 11 C 0.594 3.406 12 O -0.541 6.541 13 C -0.054 4.054 14 C -0.134 4.134 15 C -0.213 4.213 16 C 0.061 3.939 17 C -0.053 4.053 18 O -0.551 6.551 19 Si 0.716 3.284 20 N -0.385 5.385 21 C 0.055 3.945 22 C -0.125 4.125 23 C -0.109 4.109 24 C 0.531 3.469 25 O -0.456 6.456 26 H 0.098 0.902 27 H 0.079 0.921 28 H 0.079 0.921 29 H 0.439 0.561 30 H 0.080 0.920 31 H 0.095 0.905 32 H 0.084 0.916 33 H 0.069 0.931 34 H 0.096 0.904 35 H 0.403 0.597 36 H 0.147 0.853 37 H 0.145 0.855 38 H 0.081 0.919 39 H 0.387 0.613 40 H -0.253 1.253 41 H -0.253 1.253 42 H 0.071 0.929 43 H 0.109 0.891 44 H 0.103 0.897 45 H 0.086 0.914 46 H 0.073 0.927 47 H 0.096 0.904 48 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.291 -0.231 -1.466 6.464 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 N -0.327 5.327 3 C 0.403 3.597 4 O -0.413 6.413 5 N -0.381 5.381 6 C 0.031 3.969 7 C -0.149 4.149 8 C -0.166 4.166 9 C 0.042 3.958 10 N -0.368 5.368 11 C 0.383 3.617 12 O -0.420 6.420 13 C -0.168 4.168 14 C -0.161 4.161 15 C -0.236 4.236 16 C -0.057 4.057 17 C -0.163 4.163 18 O -0.358 6.358 19 Si 0.615 3.385 20 N -0.056 5.056 21 C -0.085 4.085 22 C -0.163 4.163 23 C -0.148 4.148 24 C 0.317 3.683 25 O -0.325 6.325 26 H 0.117 0.883 27 H 0.098 0.902 28 H 0.098 0.902 29 H 0.285 0.715 30 H 0.099 0.901 31 H 0.113 0.887 32 H 0.102 0.898 33 H 0.087 0.913 34 H 0.114 0.886 35 H 0.239 0.761 36 H 0.165 0.835 37 H 0.162 0.838 38 H 0.099 0.901 39 H 0.237 0.763 40 H -0.178 1.178 41 H -0.177 1.177 42 H 0.089 0.911 43 H 0.127 0.873 44 H 0.122 0.878 45 H 0.104 0.896 46 H 0.092 0.908 47 H 0.115 0.885 48 H 0.102 0.898 Dipole moment (debyes) X Y Z Total from point charges 4.793 -0.379 -0.900 4.891 hybrid contribution -0.129 0.418 -0.547 0.701 sum 4.664 0.039 -1.447 4.884 Atomic orbital electron populations 1.21914 0.74670 1.05354 1.03734 1.46333 1.09817 1.07963 1.68625 1.15938 0.82224 0.84163 0.77396 1.91046 1.75184 1.20281 1.54765 1.45603 1.06508 1.07081 1.78917 1.21140 0.94180 0.81749 0.99782 1.21655 0.95510 1.02978 0.94781 1.21933 0.94162 1.01169 0.99363 1.21055 0.79726 1.00541 0.94488 1.45641 1.08178 1.29204 1.53757 1.16931 0.83432 0.82348 0.79008 1.90797 1.82924 1.27892 1.40379 1.20022 0.88350 0.98991 1.09449 1.21229 0.94720 0.97334 1.02780 1.20524 0.96072 0.99528 1.07520 1.20100 0.87399 0.95099 1.03138 1.24544 0.95547 1.07739 0.88445 1.86371 1.35057 1.77432 1.36980 0.95418 0.85941 0.75381 0.81755 1.43772 1.04486 1.19796 1.37565 1.22626 1.06602 0.82831 0.96455 1.21804 0.94759 1.01598 0.98117 1.21631 0.94968 1.03063 0.95157 1.20645 0.88086 0.84921 0.74648 1.90835 1.78974 1.17654 1.44989 0.88296 0.90220 0.90221 0.71527 0.90108 0.88660 0.89781 0.91283 0.88553 0.76140 0.83505 0.83787 0.90092 0.76333 1.17790 1.17698 0.91081 0.87295 0.87839 0.89570 0.90809 0.88546 0.89805 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 -0.06 10.89 59.85 0.65 0.60 16 2 N -0.58 -0.54 3.01 -128.24 -0.39 -0.92 16 3 C 0.70 1.19 8.63 -87.83 -0.76 0.43 16 4 O -0.54 -2.86 17.24 5.33 0.09 -2.77 16 5 N -0.72 1.15 5.22 -53.88 -0.28 0.87 16 6 C 0.12 -0.21 0.84 -133.11 -0.11 -0.32 16 7 C -0.11 0.21 4.98 -26.95 -0.13 0.08 16 8 C -0.13 0.27 5.38 -26.68 -0.14 0.12 16 9 C 0.15 -0.33 2.40 -67.93 -0.16 -0.49 16 10 N -0.72 1.06 5.06 -55.11 -0.28 0.78 16 11 C 0.59 1.34 7.73 -12.85 -0.10 1.24 16 12 O -0.54 -2.73 14.20 5.19 0.07 -2.65 16 13 C -0.05 -0.14 6.89 -81.98 -0.56 -0.71 16 14 C -0.13 -0.15 10.35 -39.12 -0.41 -0.56 16 15 C -0.21 -0.41 9.37 -39.98 -0.37 -0.78 16 16 C 0.06 0.14 6.18 -81.95 -0.51 -0.37 16 17 C -0.05 0.05 2.98 36.00 0.11 0.16 16 18 O -0.55 0.87 9.79 -35.23 -0.35 0.53 16 19 Si 0.72 -1.51 31.22 -169.99 -5.31 -6.82 16 20 N -0.38 -1.23 3.16 -115.62 -0.37 -1.60 16 21 C 0.05 0.11 10.30 59.85 0.62 0.73 16 22 C -0.12 0.52 5.28 -26.68 -0.14 0.38 16 23 C -0.11 0.34 4.98 -26.95 -0.13 0.20 16 24 C 0.53 0.48 6.95 -10.72 -0.07 0.40 16 25 O -0.46 -1.59 17.86 5.60 0.10 -1.49 16 26 H 0.10 -0.06 7.45 -51.93 -0.39 -0.45 16 27 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 28 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 29 H 0.44 -1.48 7.70 -40.82 -0.31 -1.79 16 30 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 31 H 0.09 -0.15 8.14 -51.93 -0.42 -0.57 16 32 H 0.08 0.01 8.08 -51.93 -0.42 -0.41 16 33 H 0.07 -0.21 7.33 -51.93 -0.38 -0.59 16 34 H 0.10 -0.05 7.65 -51.93 -0.40 -0.45 16 35 H 0.40 -1.52 7.50 -40.82 -0.31 -1.82 16 36 H 0.15 -0.31 7.45 -52.48 -0.39 -0.70 16 37 H 0.14 0.10 6.69 -52.49 -0.35 -0.25 16 38 H 0.08 -0.21 7.96 -51.93 -0.41 -0.62 16 39 H 0.39 -2.57 8.74 45.56 0.40 -2.17 16 40 H -0.25 -0.01 6.87 56.52 0.39 0.38 16 41 H -0.25 -0.48 7.11 56.52 0.40 -0.08 16 42 H 0.07 0.09 8.14 -51.93 -0.42 -0.33 16 43 H 0.11 0.14 5.49 -51.93 -0.28 -0.14 16 44 H 0.10 0.34 5.93 -51.93 -0.31 0.03 16 45 H 0.09 -0.38 8.14 -51.93 -0.42 -0.80 16 46 H 0.07 -0.39 7.33 -51.93 -0.38 -0.77 16 47 H 0.10 -0.28 8.14 -51.93 -0.42 -0.70 16 48 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 LS Contribution 385.34 15.07 5.81 5.81 Total: 0.00 -12.04 385.34 -9.65 -21.70 By element: Atomic # 1 Polarization: -8.02 SS G_CDS: -6.53 Total: -14.55 kcal Atomic # 6 Polarization: 3.35 SS G_CDS: -2.23 Total: 1.12 kcal Atomic # 7 Polarization: 0.44 SS G_CDS: -1.31 Total: -0.88 kcal Atomic # 8 Polarization: -6.30 SS G_CDS: -0.08 Total: -6.38 kcal Atomic # 14 Polarization: -1.51 SS G_CDS: -5.31 Total: -6.82 kcal Total LS contribution 5.81 Total: 5.81 kcal Total: -12.04 -9.65 -21.70 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17849352_10803936.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -26.130 kcal (2) G-P(sol) polarization free energy of solvation -12.041 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -38.171 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.655 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.696 kcal (6) G-S(sol) free energy of system = (1) + (5) -47.826 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.13 seconds