Wall clock time and date at job start Sun Mar 7 2021 15:05:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 C 1.33867 * 124.19633 * 2 1 4 4 O 1.21543 * 123.78599 * 359.96086 * 3 2 1 5 5 N 1.34668 * 112.42206 * 179.69629 * 3 2 1 6 6 C 1.46846 * 106.41786 * 0.26707 * 5 3 2 7 7 C 1.52478 * 110.48962 * 241.43435 * 6 5 3 8 8 C 1.53092 * 109.52036 * 296.01925 * 7 6 5 9 9 C 1.53001 * 109.41823 * 300.83810 * 8 7 6 10 10 N 1.46503 * 109.45383 * 180.42614 * 9 8 7 11 11 C 1.34775 * 119.99991 * 84.89768 * 10 9 8 12 12 O 1.21700 * 120.00028 * 354.95978 * 11 10 9 13 13 C 1.46682 * 120.00103 * 174.96407 * 11 10 9 14 14 C 1.37873 * 126.23164 * 4.95849 * 13 11 10 15 15 C 1.39828 * 107.08562 * 180.02562 * 14 13 11 16 16 C 1.35451 * 107.86609 * 359.97438 * 15 14 13 17 17 C 1.50697 * 125.56518 * 180.02562 * 16 15 14 18 18 O 1.42902 * 109.47172 * 149.98032 * 17 16 15 19 19 Si 1.86300 * 109.47138 * 29.98211 * 17 16 15 20 20 N 1.35534 * 108.86939 * 359.73717 * 16 15 14 21 21 C 1.46502 * 125.68078 * 180.29866 * 20 16 15 22 22 C 1.53005 * 109.57069 * 60.39708 * 9 8 7 23 23 C 1.52477 * 110.48356 * 118.55508 * 6 5 3 24 24 C 1.34916 * 124.19565 * 180.17804 * 2 1 3 25 25 O 1.21236 * 127.25830 * 0.02562 * 24 2 1 26 26 H 1.09006 * 109.47283 * 0.02562 * 1 2 3 27 27 H 1.08996 * 109.47498 * 120.02657 * 1 2 3 28 28 H 1.09004 * 109.47304 * 240.02858 * 1 2 3 29 29 H 0.97007 * 126.78936 * 180.27176 * 5 3 2 30 30 H 1.09000 * 109.45874 * 56.03422 * 7 6 5 31 31 H 1.09000 * 109.46043 * 176.00580 * 7 6 5 32 32 H 1.08993 * 109.47807 * 180.85069 * 8 7 6 33 33 H 1.09004 * 109.47619 * 60.81891 * 8 7 6 34 34 H 1.08994 * 109.45504 * 300.36305 * 9 8 7 35 35 H 0.97000 * 119.99906 * 264.90452 * 10 9 8 36 36 H 1.08003 * 126.45543 * 359.96259 * 14 13 11 37 37 H 1.08001 * 126.07209 * 179.97438 * 15 14 13 38 38 H 1.08997 * 109.47290 * 269.97763 * 17 16 15 39 39 H 0.96705 * 114.00354 * 179.97438 * 18 17 16 40 40 H 1.48499 * 109.99613 * 298.67656 * 19 17 16 41 41 H 1.48492 * 110.00060 * 59.99933 * 19 17 16 42 42 H 1.09001 * 109.47622 * 275.96176 * 21 20 16 43 43 H 1.09004 * 109.46933 * 35.95964 * 21 20 16 44 44 H 1.08997 * 109.47599 * 155.95747 * 21 20 16 45 45 H 1.08998 * 109.48036 * 179.61828 * 22 9 8 46 46 H 1.08997 * 109.48216 * 59.57794 * 22 9 8 47 47 H 1.09002 * 109.46552 * 183.98562 * 23 6 5 48 48 H 1.08996 * 109.46838 * 303.96528 * 23 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2174 1.1072 0.0000 4 8 1.7617 2.2340 -0.0007 5 7 3.5357 0.8325 0.0066 6 6 3.6546 -0.6312 0.0049 7 6 4.3719 -1.1099 1.2625 8 6 5.8074 -0.5780 1.2664 9 6 6.5388 -1.0788 0.0193 10 7 7.9158 -0.5787 0.0274 11 6 8.8719 -1.2478 0.7016 12 8 8.5755 -2.2150 1.3784 13 6 10.2696 -0.8104 0.6199 14 6 10.7346 0.3158 -0.0252 15 6 12.1218 0.3452 0.1479 16 6 12.4722 -0.7392 0.8800 17 6 13.8744 -1.0973 1.3002 18 8 13.8340 -1.8035 2.5418 19 14 14.8784 0.4589 1.5032 20 7 11.3551 -1.4463 1.1784 21 6 11.3106 -2.6834 1.9619 22 6 5.8205 -0.5737 -1.2337 23 6 4.3850 -1.1057 -1.2466 24 6 2.2233 -1.1159 -0.0035 25 8 1.8377 -2.2653 -0.0075 26 1 -0.3634 1.0277 -0.0005 27 1 -0.3634 -0.5142 -0.8897 28 1 -0.3634 -0.5134 0.8903 29 1 4.2629 1.4744 0.0116 30 1 3.8456 -0.7415 2.1431 31 1 4.3882 -2.1996 1.2786 32 1 6.3241 -0.9330 2.1580 33 1 5.7912 0.5119 1.2651 34 1 6.5488 -2.1687 0.0175 35 1 8.1394 0.2342 -0.4524 36 1 10.1396 1.0386 -0.5638 37 1 12.7945 1.0987 -0.2342 38 1 14.3321 -1.7282 0.5382 39 1 14.7036 -2.0665 2.8733 40 1 14.9547 1.1862 0.2108 41 1 14.2647 1.3275 2.5395 42 1 11.5227 -3.5327 1.3125 43 1 12.0565 -2.6378 2.7556 44 1 10.3198 -2.8002 2.4008 45 1 6.3466 -0.9256 -2.1210 46 1 5.8042 0.5162 -1.2288 47 1 4.4018 -2.1955 -1.2661 48 1 3.8682 -0.7346 -2.1315 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17849352_10803936.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 15:05:14 Heat of formation + Delta-G solvation = -52.800286 kcal Electronic energy + Delta-G solvation = -33408.459374 eV Core-core repulsion = 28852.807715 eV Total energy + Delta-G solvation = -4555.651659 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 363.167 amu Computer time = 1.28 seconds Orbital eigenvalues (eV) -43.87137 -42.66617 -40.76473 -39.88744 -39.11109 -37.69346 -37.11067 -36.05070 -34.33493 -33.64781 -32.16178 -31.75182 -30.16131 -28.85694 -27.55450 -26.80296 -25.08058 -24.20771 -23.69372 -22.91172 -21.79469 -21.41415 -21.16320 -20.30543 -19.16250 -18.80247 -18.37509 -17.99587 -17.70088 -17.39863 -16.97022 -16.78014 -16.65103 -16.58456 -16.00380 -15.90977 -15.60001 -15.41745 -15.34894 -15.26219 -14.94693 -14.57106 -14.39124 -14.35928 -13.93157 -13.82466 -13.68937 -13.59180 -13.49999 -13.38926 -13.23282 -13.22383 -13.01216 -12.66462 -12.38206 -12.06839 -11.96827 -11.92158 -11.69684 -11.33791 -11.06611 -11.00148 -10.60383 -10.56142 -10.22992 -9.88004 -9.17485 -4.92883 0.28161 0.40142 1.10497 1.15429 1.45623 1.67930 1.73518 1.81131 1.97884 2.09140 2.23395 2.26435 2.76824 3.18621 3.27559 3.36315 3.59116 3.65430 3.71202 3.91334 3.92904 3.93609 4.05666 4.11581 4.22580 4.26473 4.31188 4.34993 4.35958 4.38983 4.40599 4.50583 4.50925 4.60227 4.70434 4.73704 4.80768 4.84446 4.89139 4.94037 4.96202 4.99119 5.12843 5.15293 5.37751 5.61475 5.69498 5.86316 5.88594 6.03588 6.21185 6.42181 6.82122 6.97045 7.07382 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.078 3.922 2 N -0.583 5.583 3 C 0.701 3.299 4 O -0.578 6.578 5 N -0.696 5.696 6 C 0.132 3.868 7 C -0.105 4.105 8 C -0.120 4.120 9 C 0.147 3.853 10 N -0.699 5.699 11 C 0.590 3.410 12 O -0.578 6.578 13 C -0.081 4.081 14 C -0.126 4.126 15 C -0.233 4.233 16 C 0.045 3.955 17 C -0.063 4.063 18 O -0.566 6.566 19 Si 0.818 3.182 20 N -0.401 5.401 21 C 0.061 3.939 22 C -0.114 4.114 23 C -0.106 4.106 24 C 0.530 3.470 25 O -0.485 6.485 26 H 0.097 0.903 27 H 0.089 0.911 28 H 0.086 0.914 29 H 0.450 0.550 30 H 0.077 0.923 31 H 0.090 0.910 32 H 0.061 0.939 33 H 0.084 0.916 34 H 0.078 0.922 35 H 0.417 0.583 36 H 0.178 0.822 37 H 0.154 0.846 38 H 0.102 0.898 39 H 0.409 0.591 40 H -0.279 1.279 41 H -0.310 1.310 42 H 0.074 0.926 43 H 0.115 0.885 44 H 0.086 0.914 45 H 0.097 0.903 46 H 0.094 0.906 47 H 0.095 0.905 48 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.434 0.392 -2.542 7.866 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.063 4.063 2 N -0.329 5.329 3 C 0.402 3.598 4 O -0.454 6.454 5 N -0.362 5.362 6 C 0.041 3.959 7 C -0.144 4.144 8 C -0.159 4.159 9 C 0.043 3.957 10 N -0.350 5.350 11 C 0.379 3.621 12 O -0.460 6.460 13 C -0.195 4.195 14 C -0.152 4.152 15 C -0.257 4.257 16 C -0.074 4.074 17 C -0.171 4.171 18 O -0.377 6.377 19 Si 0.721 3.279 20 N -0.073 5.073 21 C -0.080 4.080 22 C -0.152 4.152 23 C -0.145 4.145 24 C 0.317 3.683 25 O -0.355 6.355 26 H 0.115 0.885 27 H 0.107 0.893 28 H 0.105 0.895 29 H 0.298 0.702 30 H 0.096 0.904 31 H 0.109 0.891 32 H 0.080 0.920 33 H 0.103 0.897 34 H 0.096 0.904 35 H 0.255 0.745 36 H 0.196 0.804 37 H 0.171 0.829 38 H 0.119 0.881 39 H 0.262 0.738 40 H -0.206 1.206 41 H -0.239 1.239 42 H 0.093 0.907 43 H 0.133 0.867 44 H 0.105 0.895 45 H 0.115 0.885 46 H 0.112 0.888 47 H 0.113 0.887 48 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges 5.971 0.232 -2.001 6.302 hybrid contribution -0.485 0.241 -0.174 0.569 sum 5.486 0.473 -2.175 5.920 Atomic orbital electron populations 1.22053 0.74093 1.05514 1.04615 1.46450 1.10481 1.07876 1.68127 1.16042 0.82999 0.83651 0.77113 1.91022 1.75985 1.21662 1.56742 1.45519 1.05714 1.07330 1.77624 1.21124 0.92765 0.81339 1.00683 1.21595 0.95551 1.02734 0.94554 1.21840 0.93550 1.01961 0.98509 1.21076 0.79436 0.99685 0.95509 1.45520 1.07796 1.29094 1.52570 1.17066 0.83917 0.82148 0.78962 1.90776 1.83424 1.29621 1.42184 1.20319 0.88576 0.99965 1.10596 1.21641 0.94761 0.97009 1.01771 1.20815 0.96806 0.99956 1.08112 1.20771 0.88580 0.95100 1.02901 1.24788 0.93954 1.09079 0.89298 1.86311 1.37248 1.77425 1.36758 0.94357 0.83778 0.72402 0.77334 1.43977 1.05066 1.20184 1.38064 1.22538 1.05745 0.83018 0.96658 1.21757 0.93552 1.02715 0.97194 1.21649 0.95417 1.03117 0.94351 1.20982 0.89031 0.84448 0.73790 1.90820 1.79648 1.18653 1.46380 0.88458 0.89262 0.89516 0.70233 0.90405 0.89124 0.92007 0.89714 0.90373 0.74504 0.80446 0.82891 0.88075 0.73779 1.20622 1.23863 0.90735 0.86694 0.89521 0.88461 0.88797 0.88667 0.89085 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 -0.06 10.89 127.77 1.39 1.33 16 2 N -0.58 -1.26 3.01 -796.77 -2.40 -3.66 16 3 C 0.70 2.37 8.63 179.37 1.55 3.92 16 4 O -0.58 -6.36 17.24 -3.85 -0.07 -6.43 16 5 N -0.70 2.80 5.22 -442.72 -2.31 0.48 16 6 C 0.13 -0.51 0.84 2.58 0.00 -0.50 16 7 C -0.11 0.37 4.98 30.45 0.15 0.52 16 8 C -0.12 0.50 5.38 30.63 0.16 0.66 16 9 C 0.15 -0.70 2.40 44.99 0.11 -0.60 16 10 N -0.70 2.38 5.06 -446.48 -2.26 0.12 16 11 C 0.59 3.14 7.73 86.45 0.67 3.80 16 12 O -0.58 -6.95 14.20 -4.35 -0.06 -7.01 16 13 C -0.08 -0.48 6.89 40.35 0.28 -0.20 16 14 C -0.13 -0.22 10.35 22.57 0.23 0.01 16 15 C -0.23 -0.85 9.37 22.01 0.21 -0.65 16 16 C 0.05 0.21 6.18 41.34 0.26 0.47 16 17 C -0.06 0.16 2.98 71.24 0.21 0.37 16 18 O -0.57 2.04 9.79 -148.98 -1.46 0.59 16 19 Si 0.82 -3.75 31.22 68.60 2.14 -1.61 16 20 N -0.40 -2.91 3.16 -519.70 -1.64 -4.55 16 21 C 0.06 0.34 10.30 127.77 1.32 1.65 16 22 C -0.11 1.16 5.28 30.63 0.16 1.32 16 23 C -0.11 0.77 4.98 30.45 0.15 0.92 16 24 C 0.53 1.10 6.95 87.77 0.61 1.71 16 25 O -0.48 -3.71 17.86 -2.89 -0.05 -3.76 16 26 H 0.10 -0.04 7.45 -2.38 -0.02 -0.05 16 27 H 0.09 -0.25 8.14 -2.39 -0.02 -0.27 16 28 H 0.09 -0.20 8.14 -2.38 -0.02 -0.22 16 29 H 0.45 -3.75 7.70 -92.70 -0.71 -4.46 16 30 H 0.08 -0.20 8.14 -2.39 -0.02 -0.22 16 31 H 0.09 -0.19 8.14 -2.39 -0.02 -0.21 16 32 H 0.06 0.08 8.08 -2.39 -0.02 0.06 16 33 H 0.08 -0.62 7.33 -2.39 -0.02 -0.63 16 34 H 0.08 -0.02 7.65 -2.39 -0.02 -0.04 16 35 H 0.42 -3.82 7.50 -92.71 -0.70 -4.51 16 36 H 0.18 -1.08 7.45 -2.91 -0.02 -1.10 16 37 H 0.15 0.15 6.69 -2.91 -0.02 0.13 16 38 H 0.10 -0.67 7.96 -2.39 -0.02 -0.69 16 39 H 0.41 -5.89 8.74 -74.05 -0.65 -6.54 16 40 H -0.28 0.12 6.87 99.48 0.68 0.80 16 41 H -0.31 -1.57 7.11 99.48 0.71 -0.86 16 42 H 0.07 0.30 8.14 -2.39 -0.02 0.28 16 43 H 0.11 0.42 5.49 -2.38 -0.01 0.41 16 44 H 0.09 0.78 5.93 -2.39 -0.01 0.76 16 45 H 0.10 -1.08 8.14 -2.39 -0.02 -1.10 16 46 H 0.09 -1.27 7.33 -2.39 -0.02 -1.29 16 47 H 0.09 -0.59 8.14 -2.39 -0.02 -0.61 16 48 H 0.09 -0.71 8.14 -2.39 -0.02 -0.72 16 Total: 0.00 -30.51 385.34 -1.65 -32.17 By element: Atomic # 1 Polarization: -20.09 SS G_CDS: -1.00 Total: -21.09 kcal Atomic # 6 Polarization: 7.30 SS G_CDS: 7.46 Total: 14.76 kcal Atomic # 7 Polarization: 1.00 SS G_CDS: -8.62 Total: -7.61 kcal Atomic # 8 Polarization: -14.98 SS G_CDS: -1.64 Total: -16.62 kcal Atomic # 14 Polarization: -3.75 SS G_CDS: 2.14 Total: -1.61 kcal Total: -30.51 -1.65 -32.17 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17849352_10803936.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -20.634 kcal (2) G-P(sol) polarization free energy of solvation -30.515 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -51.149 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.652 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.166 kcal (6) G-S(sol) free energy of system = (1) + (5) -52.800 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.29 seconds