Wall clock time and date at job start Sun Mar 7 2021 15:05:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50695 * 1 3 3 C 1.35453 * 125.56687 * 2 1 4 4 C 1.50706 * 126.06748 * 0.05979 * 3 2 1 5 5 O 1.42897 * 109.47380 * 296.40454 * 4 3 2 6 6 Si 1.86305 * 109.46771 * 56.40306 * 4 3 2 7 7 C 1.39834 * 107.86691 * 180.02562 * 3 2 1 8 8 C 1.50703 * 126.45662 * 180.02562 * 7 3 2 9 9 C 1.37870 * 107.08743 * 359.97438 * 7 3 2 10 10 C 1.46673 * 126.23703 * 180.02562 * 9 7 3 11 11 O 1.21692 * 119.99852 * 0.02562 * 10 9 7 12 12 N 1.34780 * 120.00130 * 179.97438 * 10 9 7 13 13 C 1.46502 * 119.99915 * 180.02562 * 12 10 9 14 14 C 1.53003 * 109.45068 * 205.00391 * 13 12 10 15 15 C 1.53093 * 109.41124 * 179.56686 * 14 13 12 16 16 C 1.52481 * 109.51931 * 59.16975 * 15 14 13 17 17 C 1.52467 * 110.72356 * 301.24139 * 16 15 14 18 18 C 1.52988 * 109.45784 * 84.89986 * 13 12 10 19 19 N 1.46862 * 110.47918 * 63.97622 * 16 15 14 20 20 C 1.34679 * 106.41333 * 118.55833 * 19 16 15 21 21 O 1.21534 * 123.78375 * 180.02562 * 20 19 16 22 22 N 1.33868 * 112.42130 * 0.26796 * 20 19 16 23 23 C 1.46505 * 124.19023 * 179.69093 * 22 20 19 24 24 C 1.34912 * 111.61127 * 359.53698 * 22 20 19 25 25 O 1.21237 * 127.25711 * 180.17944 * 24 22 20 26 26 N 1.35536 * 125.56481 * 180.34217 * 2 1 3 27 27 H 1.09000 * 109.47131 * 94.30958 * 1 2 3 28 28 H 1.08992 * 109.47539 * 214.31296 * 1 2 3 29 29 H 1.09004 * 109.46855 * 334.31437 * 1 2 3 30 30 H 1.08995 * 109.46807 * 176.39908 * 4 3 2 31 31 H 0.96698 * 113.99771 * 59.99364 * 5 4 3 32 32 H 1.48501 * 109.99849 * 63.72890 * 6 4 3 33 33 H 1.48498 * 109.99902 * 185.04955 * 6 4 3 34 34 H 1.08994 * 109.47570 * 269.98097 * 8 7 3 35 35 H 1.09002 * 109.47247 * 29.98807 * 8 7 3 36 36 H 1.09005 * 109.46779 * 149.98316 * 8 7 3 37 37 H 0.96997 * 119.99957 * 359.97438 * 12 10 9 38 38 H 1.08998 * 109.43716 * 324.94702 * 13 12 10 39 39 H 1.08997 * 109.48672 * 59.58569 * 14 13 12 40 40 H 1.09000 * 109.48204 * 299.54547 * 14 13 12 41 41 H 1.08995 * 109.46553 * 299.15574 * 15 14 13 42 42 H 1.09006 * 109.46481 * 179.18599 * 15 14 13 43 43 H 1.09003 * 109.46571 * 178.76939 * 17 16 15 44 44 H 1.08999 * 109.46371 * 298.73308 * 17 16 15 45 45 H 1.08998 * 109.48194 * 300.40921 * 18 13 12 46 46 H 1.09008 * 109.48139 * 60.44320 * 18 13 12 47 47 H 0.96997 * 126.78974 * 298.55446 * 19 16 15 48 48 H 1.08997 * 109.46954 * 0.02747 * 23 22 20 49 49 H 1.09006 * 109.46362 * 120.02433 * 23 22 20 50 50 H 1.09001 * 109.47345 * 240.02487 * 23 22 20 51 51 H 0.97000 * 125.67856 * 0.02562 * 26 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.2948 1.1018 0.0000 4 6 1.8200 2.5321 0.0013 5 8 1.1002 2.7962 -1.2046 6 14 0.7031 2.8143 1.4655 7 6 3.6270 0.6767 -0.0006 8 6 4.8486 1.5592 -0.0003 9 6 3.6122 -0.7019 -0.0004 10 6 4.7859 -1.5816 -0.0003 11 8 5.9048 -1.1031 0.0001 12 7 4.6252 -2.9197 0.0005 13 6 5.7976 -3.7983 0.0011 14 6 5.4213 -5.1505 -0.6079 15 6 6.6497 -6.0641 -0.6167 16 6 7.1546 -6.2526 0.8097 17 6 7.5135 -4.9101 1.4369 18 6 6.2821 -4.0004 1.4381 19 7 6.1485 -6.9475 1.6232 20 6 6.7173 -8.0983 2.0306 21 8 6.1555 -8.9200 2.7280 22 7 7.9725 -8.2331 1.5854 23 6 8.8315 -9.3828 1.8799 24 6 8.3473 -7.1805 0.8294 25 8 9.4172 -7.0120 0.2846 26 7 2.2953 -1.1025 -0.0066 27 1 -0.3633 -0.0772 -1.0248 28 1 -0.3634 -0.8487 0.5792 29 1 -0.3633 0.9262 0.4454 30 1 2.6789 3.2000 0.0655 31 1 0.3211 2.2369 -1.3281 32 1 1.4640 2.6305 2.7275 33 1 0.1315 4.1838 1.4118 34 1 5.1431 1.7724 -1.0278 35 1 4.6220 2.4931 0.5141 36 1 5.6643 1.0502 0.5133 37 1 3.7333 -3.3011 0.0014 38 1 6.5925 -3.3428 -0.5894 39 1 5.0699 -5.0041 -1.6293 40 1 4.6311 -5.6095 -0.0138 41 1 7.4344 -5.6117 -1.2229 42 1 6.3790 -7.0327 -1.0372 43 1 7.8506 -5.0664 2.4616 44 1 8.3107 -4.4413 0.8600 45 1 6.5434 -3.0356 1.8728 46 1 5.4898 -4.4622 2.0274 47 1 5.2519 -6.6386 1.8269 48 1 8.2887 -10.0910 2.5059 49 1 9.1201 -9.8687 0.9477 50 1 9.7247 -9.0441 2.4048 51 1 1.9834 -2.0210 -0.0124 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17849352_12297754.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 15:05:23 Heat of formation + Delta-G solvation = -66.176592 kcal Electronic energy + Delta-G solvation = -35569.060147 eV Core-core repulsion = 30857.290829 eV Total energy + Delta-G solvation = -4711.769318 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 377.183 amu Computer time = 1.39 seconds Orbital eigenvalues (eV) -43.86215 -42.74021 -40.80357 -39.76213 -39.12582 -37.73945 -37.00271 -36.05404 -34.29947 -33.84423 -32.81997 -32.38540 -30.46102 -29.33699 -28.94027 -27.52440 -26.43961 -25.03435 -24.41056 -23.64714 -22.34710 -21.75751 -21.33152 -20.73008 -20.35228 -19.45535 -19.03907 -17.96739 -17.91820 -17.61194 -17.29902 -16.84791 -16.65490 -16.60051 -16.49989 -16.12535 -15.87427 -15.61565 -15.54652 -15.25516 -15.20124 -14.84330 -14.52505 -14.51983 -14.22724 -14.10389 -13.95686 -13.89730 -13.85292 -13.65952 -13.63065 -13.54039 -13.31856 -13.26141 -13.20048 -12.64629 -12.58544 -12.39680 -12.13874 -11.99528 -11.93745 -11.88629 -11.25163 -10.97128 -10.91644 -10.63465 -10.53228 -10.31602 -9.54894 -9.06342 -4.99969 0.33979 0.46727 1.08726 1.19907 1.52595 1.75199 1.81848 1.88710 1.89877 1.93109 2.07460 2.30734 2.73571 3.11677 3.17909 3.43550 3.55550 3.61673 3.68146 3.71690 3.81914 3.87329 3.87755 3.93596 3.98532 4.00513 4.17503 4.20365 4.25192 4.25905 4.28847 4.37196 4.46809 4.49372 4.55898 4.57017 4.59836 4.65862 4.66956 4.68496 4.74716 4.84721 4.91419 4.94733 5.01595 5.17475 5.21620 5.36253 5.60017 5.66920 5.83526 5.88747 6.19273 6.23312 6.35761 6.60740 6.99110 7.06935 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.098 4.098 2 C 0.068 3.932 3 C -0.204 4.204 4 C -0.030 4.030 5 O -0.540 6.540 6 Si 0.664 3.336 7 C -0.047 4.047 8 C -0.095 4.095 9 C -0.064 4.064 10 C 0.593 3.407 11 O -0.519 6.519 12 N -0.731 5.731 13 C 0.144 3.856 14 C -0.124 4.124 15 C -0.109 4.109 16 C 0.123 3.877 17 C -0.111 4.111 18 C -0.127 4.127 19 N -0.716 5.716 20 C 0.702 3.298 21 O -0.540 6.540 22 N -0.580 5.580 23 C 0.084 3.916 24 C 0.531 3.469 25 O -0.455 6.455 26 N -0.534 5.534 27 H 0.089 0.911 28 H 0.081 0.919 29 H 0.088 0.912 30 H 0.114 0.886 31 H 0.371 0.629 32 H -0.255 1.255 33 H -0.251 1.251 34 H 0.071 0.929 35 H 0.061 0.939 36 H 0.083 0.917 37 H 0.393 0.607 38 H 0.099 0.901 39 H 0.084 0.916 40 H 0.071 0.929 41 H 0.097 0.903 42 H 0.083 0.917 43 H 0.081 0.919 44 H 0.096 0.904 45 H 0.083 0.917 46 H 0.067 0.933 47 H 0.439 0.561 48 H 0.098 0.902 49 H 0.079 0.921 50 H 0.079 0.921 51 H 0.416 0.584 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.545 -2.739 -0.920 7.154 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C -0.050 4.050 3 C -0.211 4.211 4 C -0.141 4.141 5 O -0.345 6.345 6 Si 0.565 3.435 7 C -0.055 4.055 8 C -0.152 4.152 9 C -0.175 4.175 10 C 0.382 3.618 11 O -0.394 6.394 12 N -0.382 5.382 13 C 0.040 3.960 14 C -0.162 4.162 15 C -0.148 4.148 16 C 0.032 3.968 17 C -0.150 4.150 18 C -0.165 4.165 19 N -0.382 5.382 20 C 0.403 3.597 21 O -0.413 6.413 22 N -0.327 5.327 23 C -0.057 4.057 24 C 0.317 3.683 25 O -0.323 6.323 26 N -0.131 5.131 27 H 0.107 0.893 28 H 0.100 0.900 29 H 0.106 0.894 30 H 0.131 0.869 31 H 0.218 0.782 32 H -0.180 1.180 33 H -0.175 1.175 34 H 0.090 0.910 35 H 0.080 0.920 36 H 0.102 0.898 37 H 0.227 0.773 38 H 0.117 0.883 39 H 0.103 0.897 40 H 0.090 0.910 41 H 0.115 0.885 42 H 0.102 0.898 43 H 0.099 0.901 44 H 0.114 0.886 45 H 0.102 0.898 46 H 0.086 0.914 47 H 0.284 0.716 48 H 0.117 0.883 49 H 0.098 0.902 50 H 0.098 0.902 51 H 0.253 0.747 Dipole moment (debyes) X Y Z Total from point charges -5.005 -2.088 -0.176 5.426 hybrid contribution -0.413 -0.653 -0.104 0.780 sum -5.418 -2.741 -0.280 6.079 Atomic orbital electron populations 1.20598 0.87340 1.03633 1.03843 1.20205 0.93545 0.85729 1.05567 1.19494 0.92864 0.94862 1.13858 1.24340 1.00439 0.93038 0.96328 1.86544 1.43623 1.63082 1.41274 0.95378 0.86374 0.84953 0.76829 1.19787 0.94785 0.91003 0.99931 1.20408 0.94506 0.97620 1.02696 1.20020 0.82793 0.93932 1.20803 1.16995 0.87574 0.81176 0.76077 1.90852 1.24104 1.74857 1.49626 1.45902 1.09512 1.05781 1.76999 1.21053 0.88631 0.89616 0.96744 1.21795 0.97848 0.93961 1.02616 1.21630 0.99048 1.01550 0.92621 1.21139 0.87162 0.94099 0.94420 1.21655 0.99533 0.91483 1.02299 1.21921 0.97114 1.00686 0.96820 1.45597 1.17363 1.20383 1.54809 1.15937 0.80936 0.82860 0.79975 1.91044 1.65463 1.44815 1.39950 1.46333 1.15133 1.22603 1.48662 1.21920 0.94075 0.86507 1.03181 1.20640 0.88549 0.81852 0.77292 1.90840 1.23466 1.75095 1.42942 1.41717 1.05269 1.08226 1.57915 0.89298 0.90035 0.89414 0.86904 0.78226 1.17953 1.17532 0.90988 0.92026 0.89831 0.77329 0.88295 0.89700 0.91016 0.88482 0.89841 0.90084 0.88578 0.89791 0.91429 0.71622 0.88293 0.90202 0.90194 0.74666 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.60 8.94 36.00 0.32 0.92 16 2 C 0.07 -0.16 6.75 -81.95 -0.55 -0.71 16 3 C -0.20 -0.09 4.67 -105.02 -0.49 -0.58 16 4 C -0.03 -0.01 2.89 36.01 0.10 0.09 16 5 O -0.54 -0.36 12.88 -35.23 -0.45 -0.81 16 6 Si 0.66 -0.46 29.29 -169.99 -4.98 -5.44 16 7 C -0.05 -0.10 6.21 -104.16 -0.65 -0.75 16 8 C -0.10 -0.23 9.53 36.01 0.34 0.12 16 9 C -0.06 -0.03 7.06 -81.98 -0.58 -0.61 16 10 C 0.59 0.48 7.75 -12.85 -0.10 0.38 16 11 O -0.52 -2.24 14.46 5.20 0.08 -2.16 16 12 N -0.73 2.23 5.07 -55.12 -0.28 1.95 16 13 C 0.14 -0.46 2.44 -67.93 -0.17 -0.62 16 14 C -0.12 0.63 5.28 -26.68 -0.14 0.49 16 15 C -0.11 0.41 4.98 -26.95 -0.13 0.27 16 16 C 0.12 -0.29 0.84 -133.10 -0.11 -0.40 16 17 C -0.11 0.28 4.98 -26.96 -0.13 0.14 16 18 C -0.13 0.38 5.38 -26.69 -0.14 0.23 16 19 N -0.72 1.64 5.23 -53.87 -0.28 1.36 16 20 C 0.70 0.79 8.63 -87.82 -0.76 0.03 16 21 O -0.54 -2.56 17.24 5.34 0.09 -2.47 16 22 N -0.58 -0.27 3.01 -128.24 -0.39 -0.66 16 23 C 0.08 -0.09 10.89 59.85 0.65 0.56 16 24 C 0.53 0.24 6.95 -10.72 -0.07 0.16 16 25 O -0.46 -1.41 17.86 5.59 0.10 -1.31 16 26 N -0.53 1.56 5.99 -5.70 -0.03 1.53 16 27 H 0.09 -0.65 8.14 -51.93 -0.42 -1.07 16 28 H 0.08 -0.61 8.14 -51.93 -0.42 -1.04 16 29 H 0.09 -0.60 4.06 -51.93 -0.21 -0.81 16 30 H 0.11 0.15 6.77 -51.93 -0.35 -0.20 16 31 H 0.37 -1.31 7.37 45.56 0.34 -0.97 16 32 H -0.26 -0.63 7.11 56.52 0.40 -0.23 16 33 H -0.25 -0.58 7.11 56.52 0.40 -0.18 16 34 H 0.07 0.18 8.14 -51.93 -0.42 -0.24 16 35 H 0.06 0.08 7.24 -51.93 -0.38 -0.29 16 36 H 0.08 0.29 6.48 -51.93 -0.34 -0.05 16 37 H 0.39 -2.32 7.73 -40.82 -0.32 -2.63 16 38 H 0.10 -0.11 7.58 -51.93 -0.39 -0.51 16 39 H 0.08 -0.44 8.14 -51.93 -0.42 -0.86 16 40 H 0.07 -0.45 7.33 -51.93 -0.38 -0.83 16 41 H 0.10 -0.32 8.14 -51.93 -0.42 -0.75 16 42 H 0.08 -0.30 8.14 -51.93 -0.42 -0.73 16 43 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 44 H 0.10 -0.19 8.14 -51.93 -0.42 -0.62 16 45 H 0.08 -0.07 8.14 -51.93 -0.42 -0.50 16 46 H 0.07 -0.27 7.33 -51.92 -0.38 -0.65 16 47 H 0.44 -1.83 7.70 -40.82 -0.31 -2.15 16 48 H 0.10 -0.10 7.45 -51.93 -0.39 -0.49 16 49 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 50 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 51 H 0.42 -2.66 8.19 -40.82 -0.33 -3.00 16 LS Contribution 404.20 15.07 6.09 6.09 Total: 0.00 -12.75 404.20 -9.96 -22.71 By element: Atomic # 1 Polarization: -13.24 SS G_CDS: -7.29 Total: -20.53 kcal Atomic # 6 Polarization: 2.36 SS G_CDS: -2.61 Total: -0.25 kcal Atomic # 7 Polarization: 5.16 SS G_CDS: -0.98 Total: 4.18 kcal Atomic # 8 Polarization: -6.57 SS G_CDS: -0.19 Total: -6.75 kcal Atomic # 14 Polarization: -0.46 SS G_CDS: -4.98 Total: -5.44 kcal Total LS contribution 6.09 Total: 6.09 kcal Total: -12.75 -9.96 -22.71 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17849352_12297754.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -43.471 kcal (2) G-P(sol) polarization free energy of solvation -12.748 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -56.219 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.958 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.706 kcal (6) G-S(sol) free energy of system = (1) + (5) -66.177 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.39 seconds