Wall clock time and date at job start Sun Mar 7 2021 15:05:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46502 * 1 3 3 C 1.33873 * 124.19491 * 2 1 4 4 O 1.21543 * 123.78882 * 359.96089 * 3 2 1 5 5 N 1.34668 * 112.42210 * 179.69375 * 3 2 1 6 6 C 1.46847 * 106.42112 * 0.27168 * 5 3 2 7 7 C 1.52474 * 110.49025 * 241.43843 * 6 5 3 8 8 C 1.53095 * 109.51486 * 296.01556 * 7 6 5 9 9 C 1.52997 * 109.41704 * 300.83442 * 8 7 6 10 10 N 1.46505 * 109.45661 * 180.42687 * 9 8 7 11 11 C 1.34782 * 119.99899 * 84.89977 * 10 9 8 12 12 O 1.21568 * 119.99874 * 0.02562 * 11 10 9 13 13 C 1.47686 * 119.99834 * 180.02562 * 11 10 9 14 14 C 1.39823 * 120.16617 * 180.02562 * 13 11 10 15 15 F 1.35099 * 120.11044 * 0.02562 * 14 13 11 16 16 C 1.38325 * 119.78200 * 179.97438 * 14 13 11 17 17 C 1.38204 * 120.11224 * 0.02562 * 16 14 13 18 18 C 1.38451 * 120.34174 * 359.97438 * 17 16 14 19 19 C 1.50702 * 119.88929 * 180.02562 * 18 17 16 20 20 O 1.42909 * 109.46833 * 244.99883 * 19 18 17 21 21 Si 1.86299 * 109.47057 * 4.99603 * 19 18 17 22 22 C 1.37857 * 120.22013 * 359.72255 * 18 17 16 23 23 C 1.53006 * 109.57143 * 60.39626 * 9 8 7 24 24 C 1.52472 * 110.48837 * 118.54997 * 6 5 3 25 25 C 1.34918 * 124.19877 * 180.17464 * 2 1 3 26 26 O 1.21232 * 127.25172 * 0.02562 * 25 2 1 27 27 H 1.09005 * 109.47023 * 0.02562 * 1 2 3 28 28 H 1.08992 * 109.47295 * 120.02653 * 1 2 3 29 29 H 1.09002 * 109.46914 * 240.02887 * 1 2 3 30 30 H 0.97003 * 126.79295 * 180.26969 * 5 3 2 31 31 H 1.08996 * 109.46541 * 56.02444 * 7 6 5 32 32 H 1.09001 * 109.46604 * 176.00106 * 7 6 5 33 33 H 1.09002 * 109.48147 * 180.85622 * 8 7 6 34 34 H 1.09002 * 109.48597 * 60.82031 * 8 7 6 35 35 H 1.09002 * 109.45518 * 300.36572 * 9 8 7 36 36 H 0.96995 * 120.00073 * 264.89888 * 10 9 8 37 37 H 1.07995 * 119.93894 * 180.02562 * 16 14 13 38 38 H 1.07999 * 119.82510 * 180.02562 * 17 16 14 39 39 H 1.09002 * 109.47563 * 124.99809 * 19 18 17 40 40 H 0.96697 * 113.99722 * 60.00294 * 20 19 18 41 41 H 1.48499 * 110.00110 * 58.68526 * 21 19 18 42 42 H 1.48502 * 109.99950 * 180.02562 * 21 19 18 43 43 H 1.08002 * 120.06210 * 180.30063 * 22 18 17 44 44 H 1.08997 * 109.48323 * 179.61336 * 23 9 8 45 45 H 1.09009 * 109.47470 * 59.57912 * 23 9 8 46 46 H 1.09004 * 109.46319 * 183.98645 * 24 6 5 47 47 H 1.08997 * 109.46734 * 303.96772 * 24 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2174 1.1073 0.0000 4 8 1.7618 2.2341 -0.0007 5 7 3.5357 0.8325 0.0067 6 6 3.6548 -0.6311 0.0049 7 6 4.3719 -1.1098 1.2625 8 6 5.8074 -0.5778 1.2664 9 6 6.5389 -1.0787 0.0194 10 7 7.9159 -0.5784 0.0275 11 6 8.8720 -1.2476 0.7018 12 8 8.5918 -2.2665 1.3028 13 6 10.2600 -0.7431 0.7104 14 6 11.2547 -1.4348 1.4082 15 9 10.9499 -2.5682 2.0773 16 6 12.5522 -0.9553 1.4105 17 6 12.8643 0.2039 0.7257 18 6 11.8831 0.8927 0.0331 19 6 12.2349 2.1553 -0.7107 20 8 11.5596 3.2639 -0.1130 21 14 14.0754 2.4318 -0.6290 22 6 10.5868 0.4240 0.0163 23 6 5.8206 -0.5736 -1.2336 24 6 4.3851 -1.1056 -1.2466 25 6 2.2234 -1.1159 -0.0034 26 8 1.8377 -2.2652 -0.0073 27 1 -0.3633 1.0277 -0.0005 28 1 -0.3633 -0.5142 -0.8897 29 1 -0.3633 -0.5134 0.8903 30 1 4.2630 1.4745 0.0116 31 1 3.8457 -0.7414 2.1431 32 1 4.3883 -2.1995 1.2787 33 1 6.3242 -0.9329 2.1581 34 1 5.7913 0.5121 1.2652 35 1 6.5489 -2.1686 0.0177 36 1 8.1394 0.2343 -0.4524 37 1 13.3226 -1.4878 1.9484 38 1 13.8789 0.5738 0.7303 39 1 11.9274 2.0612 -1.7522 40 1 11.7858 3.4077 0.8161 41 1 14.7901 1.2713 -1.2188 42 1 14.4352 3.6744 -1.3584 43 1 9.8245 0.9607 -0.5288 44 1 6.3468 -0.9255 -2.1209 45 1 5.8043 0.5163 -1.2287 46 1 4.4019 -2.1954 -1.2660 47 1 3.8682 -0.7345 -2.1315 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17849352_12335834.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 15:05:30 Heat of formation + Delta-G solvation = -119.310212 kcal Electronic energy + Delta-G solvation = -35200.460745 eV Core-core repulsion = 30265.208413 eV Total energy + Delta-G solvation = -4935.252332 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 378.147 amu Computer time = 1.44 seconds Orbital eigenvalues (eV) -49.99755 -43.85940 -41.45392 -40.23004 -39.85342 -39.11568 -37.42056 -37.09213 -36.01451 -34.19725 -32.62836 -32.24880 -32.15453 -30.14939 -28.80515 -26.59622 -25.82137 -24.88548 -24.18287 -23.70756 -22.70638 -21.80045 -21.49881 -20.97773 -19.31720 -19.05580 -18.30534 -18.26830 -17.98313 -17.79774 -17.38017 -16.97801 -16.88206 -16.68063 -16.58633 -16.30914 -16.06566 -15.87758 -15.66451 -15.58276 -15.47651 -15.34123 -14.80411 -14.52032 -14.40169 -14.34739 -14.30012 -13.84868 -13.66911 -13.58252 -13.50999 -13.39032 -13.16270 -13.11865 -12.80202 -12.37289 -12.16158 -12.05688 -11.95967 -11.86786 -11.67857 -11.34689 -11.07059 -10.99100 -10.57246 -10.43473 -10.39002 -10.12267 -9.81060 -4.95617 -0.47702 -0.01258 0.41184 1.11824 1.33130 1.62425 1.68512 1.82430 1.90863 1.99654 2.03692 2.49939 2.76819 3.06979 3.28304 3.36642 3.38878 3.49021 3.59376 3.66541 3.70938 3.92085 3.93770 4.01614 4.06314 4.12261 4.13369 4.27409 4.35782 4.36789 4.39948 4.45775 4.51665 4.59912 4.61554 4.71507 4.74779 4.78509 4.84887 4.85691 4.95341 4.96495 4.96891 5.12914 5.14499 5.16764 5.37739 5.61433 5.71225 5.87524 6.22265 6.37856 6.81227 6.98644 7.07515 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.078 3.922 2 N -0.583 5.583 3 C 0.701 3.299 4 O -0.577 6.577 5 N -0.696 5.696 6 C 0.132 3.868 7 C -0.106 4.106 8 C -0.119 4.119 9 C 0.142 3.858 10 N -0.704 5.704 11 C 0.556 3.444 12 O -0.568 6.568 13 C -0.188 4.188 14 C 0.132 3.868 15 F -0.137 7.137 16 C -0.154 4.154 17 C -0.051 4.051 18 C -0.135 4.135 19 C -0.063 4.063 20 O -0.551 6.551 21 Si 0.764 3.236 22 C -0.024 4.024 23 C -0.114 4.114 24 C -0.107 4.107 25 C 0.529 3.471 26 O -0.486 6.486 27 H 0.097 0.903 28 H 0.088 0.912 29 H 0.086 0.914 30 H 0.450 0.550 31 H 0.078 0.922 32 H 0.088 0.912 33 H 0.061 0.939 34 H 0.088 0.912 35 H 0.076 0.924 36 H 0.416 0.584 37 H 0.165 0.835 38 H 0.167 0.833 39 H 0.120 0.880 40 H 0.397 0.603 41 H -0.283 1.283 42 H -0.303 1.303 43 H 0.161 0.839 44 H 0.096 0.904 45 H 0.095 0.905 46 H 0.093 0.907 47 H 0.090 0.910 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.765 4.559 -1.458 7.493 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.063 4.063 2 N -0.329 5.329 3 C 0.402 3.598 4 O -0.453 6.453 5 N -0.361 5.361 6 C 0.041 3.959 7 C -0.145 4.145 8 C -0.158 4.158 9 C 0.038 3.962 10 N -0.356 5.356 11 C 0.344 3.656 12 O -0.447 6.447 13 C -0.192 4.192 14 C 0.112 3.888 15 F -0.115 7.115 16 C -0.173 4.173 17 C -0.068 4.068 18 C -0.136 4.136 19 C -0.173 4.173 20 O -0.359 6.359 21 Si 0.671 3.329 22 C -0.042 4.042 23 C -0.152 4.152 24 C -0.146 4.146 25 C 0.317 3.683 26 O -0.356 6.356 27 H 0.116 0.884 28 H 0.107 0.893 29 H 0.105 0.895 30 H 0.298 0.702 31 H 0.097 0.903 32 H 0.107 0.893 33 H 0.080 0.920 34 H 0.106 0.894 35 H 0.094 0.906 36 H 0.254 0.746 37 H 0.183 0.817 38 H 0.184 0.816 39 H 0.138 0.862 40 H 0.248 0.752 41 H -0.210 1.210 42 H -0.232 1.232 43 H 0.179 0.821 44 H 0.114 0.886 45 H 0.113 0.887 46 H 0.112 0.888 47 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges 5.441 3.878 -2.054 6.990 hybrid contribution -0.439 -0.194 -0.166 0.508 sum 5.002 3.684 -2.219 6.597 Atomic orbital electron populations 1.22049 0.74118 1.05520 1.04581 1.46454 1.10473 1.07891 1.68130 1.16039 0.83001 0.83636 0.77116 1.91023 1.75975 1.21622 1.56709 1.45502 1.05710 1.07259 1.77635 1.21108 0.92714 0.81392 1.00639 1.21598 0.95667 1.02666 0.94589 1.21834 0.93467 1.02104 0.98379 1.21079 0.79844 0.99721 0.95578 1.45761 1.08080 1.29170 1.52569 1.18275 0.85349 0.83235 0.78777 1.90856 1.83049 1.25937 1.44887 1.20070 0.93211 0.99995 1.05930 1.18229 0.94288 0.83291 0.92997 1.91561 1.93956 1.48332 1.77700 1.21387 0.94328 0.98666 1.02886 1.21367 1.00141 0.92670 0.92661 1.20465 0.93742 0.98686 1.00682 1.25043 1.09850 0.83767 0.98683 1.86499 1.70013 1.47431 1.31924 0.93880 0.72817 0.76693 0.89502 1.21214 0.97343 0.91431 0.94229 1.21756 0.93531 1.02731 0.97191 1.21647 0.95525 1.03045 0.94394 1.21000 0.89072 0.84449 0.73789 1.90820 1.79658 1.18712 1.46391 0.88418 0.89326 0.89535 0.70177 0.90288 0.89315 0.92001 0.89391 0.90600 0.74576 0.81731 0.81607 0.86245 0.75249 1.21025 1.23172 0.82129 0.88555 0.88670 0.88840 0.89113 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 -0.08 10.89 127.77 1.39 1.32 16 2 N -0.58 -1.10 3.01 -796.76 -2.40 -3.50 16 3 C 0.70 2.02 8.63 179.37 1.55 3.57 16 4 O -0.58 -6.01 17.24 -3.85 -0.07 -6.08 16 5 N -0.70 3.23 5.23 -442.72 -2.31 0.92 16 6 C 0.13 -0.55 0.84 2.58 0.00 -0.55 16 7 C -0.11 0.41 4.98 30.45 0.15 0.56 16 8 C -0.12 0.59 5.38 30.62 0.16 0.75 16 9 C 0.14 -0.75 2.44 44.99 0.11 -0.64 16 10 N -0.70 3.61 5.03 -445.54 -2.24 1.37 16 11 C 0.56 1.92 7.73 86.74 0.67 2.59 16 12 O -0.57 -7.43 15.00 -3.93 -0.06 -7.49 16 13 C -0.19 -0.07 5.88 -20.05 -0.12 -0.18 16 14 C 0.13 0.40 7.29 22.67 0.17 0.56 16 15 F -0.14 -1.41 15.55 44.97 0.70 -0.71 16 16 C -0.15 0.60 10.01 22.28 0.22 0.83 16 17 C -0.05 0.41 8.66 22.31 0.19 0.61 16 18 C -0.14 1.05 5.34 -19.90 -0.11 0.94 16 19 C -0.06 0.55 2.80 71.24 0.20 0.75 16 20 O -0.55 4.42 12.83 -148.98 -1.91 2.51 16 21 Si 0.76 -6.31 29.79 68.60 2.04 -4.27 16 22 C -0.02 0.15 9.17 22.52 0.21 0.36 16 23 C -0.11 1.21 5.28 30.63 0.16 1.38 16 24 C -0.11 0.79 4.98 30.45 0.15 0.94 16 25 C 0.53 1.03 6.95 87.77 0.61 1.64 16 26 O -0.49 -3.76 17.86 -2.88 -0.05 -3.81 16 27 H 0.10 -0.06 7.45 -2.38 -0.02 -0.08 16 28 H 0.09 -0.26 8.14 -2.39 -0.02 -0.28 16 29 H 0.09 -0.22 8.14 -2.39 -0.02 -0.24 16 30 H 0.45 -4.15 7.70 -92.71 -0.71 -4.87 16 31 H 0.08 -0.24 8.14 -2.39 -0.02 -0.26 16 32 H 0.09 -0.17 8.14 -2.39 -0.02 -0.19 16 33 H 0.06 0.03 8.14 -2.39 -0.02 0.01 16 34 H 0.09 -0.76 7.33 -2.39 -0.02 -0.78 16 35 H 0.08 0.00 7.58 -2.39 -0.02 -0.01 16 36 H 0.42 -4.83 6.63 -92.71 -0.62 -5.44 16 37 H 0.17 -1.25 8.06 -2.91 -0.02 -1.28 16 38 H 0.17 -2.25 4.88 -2.91 -0.01 -2.26 16 39 H 0.12 -1.05 7.96 -2.39 -0.02 -1.06 16 40 H 0.40 -6.10 8.70 -74.06 -0.64 -6.74 16 41 H -0.28 0.93 7.11 99.48 0.71 1.64 16 42 H -0.30 -0.22 7.11 99.48 0.71 0.49 16 43 H 0.16 -1.87 6.41 -2.91 -0.02 -1.89 16 44 H 0.10 -1.12 8.14 -2.39 -0.02 -1.14 16 45 H 0.09 -1.37 7.33 -2.38 -0.02 -1.39 16 46 H 0.09 -0.56 8.14 -2.38 -0.02 -0.58 16 47 H 0.09 -0.72 8.14 -2.39 -0.02 -0.74 16 Total: 0.00 -31.29 388.18 -1.43 -32.72 By element: Atomic # 1 Polarization: -26.22 SS G_CDS: -0.86 Total: -27.08 kcal Atomic # 6 Polarization: 9.70 SS G_CDS: 5.73 Total: 15.42 kcal Atomic # 7 Polarization: 5.75 SS G_CDS: -6.95 Total: -1.21 kcal Atomic # 8 Polarization: -12.78 SS G_CDS: -2.09 Total: -14.87 kcal Atomic # 9 Polarization: -1.41 SS G_CDS: 0.70 Total: -0.71 kcal Atomic # 14 Polarization: -6.31 SS G_CDS: 2.04 Total: -4.27 kcal Total: -31.29 -1.43 -32.72 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17849352_12335834.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -86.586 kcal (2) G-P(sol) polarization free energy of solvation -31.290 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -117.876 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.435 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.725 kcal (6) G-S(sol) free energy of system = (1) + (5) -119.310 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.44 seconds