Wall clock time and date at job start Sun Mar 7 2021 15:05:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46503 * 1 3 3 C 1.33864 * 124.19279 * 2 1 4 4 O 1.21543 * 123.79115 * 359.97438 * 3 2 1 5 5 N 1.34668 * 112.41977 * 179.73157 * 3 2 1 6 6 C 1.46863 * 106.42728 * 0.26758 * 5 3 2 7 7 C 1.52473 * 110.48385 * 241.45766 * 6 5 3 8 8 C 1.53084 * 109.58133 * 178.66420 * 7 6 5 9 9 C 1.53015 * 109.41595 * 59.14793 * 8 7 6 10 10 N 1.46497 * 109.46622 * 179.51377 * 9 8 7 11 11 C 1.34779 * 119.99880 * 275.03759 * 10 9 8 12 12 O 1.21285 * 120.00053 * 359.97438 * 11 10 9 13 13 C 1.50703 * 119.99882 * 179.97438 * 11 10 9 14 14 C 1.50701 * 109.47011 * 180.02562 * 13 11 10 15 15 C 1.38238 * 119.99607 * 269.72847 * 14 13 11 16 16 C 1.38237 * 119.99882 * 179.76688 * 15 14 13 17 17 C 1.38238 * 119.99802 * 0.50414 * 16 15 14 18 18 C 1.50700 * 120.00285 * 179.72215 * 17 16 15 19 19 O 1.42892 * 109.47645 * 245.02434 * 18 17 16 20 20 Si 1.86305 * 109.46777 * 5.02477 * 18 17 16 21 21 C 1.38237 * 119.99971 * 359.74840 * 17 16 15 22 22 C 1.38233 * 120.00305 * 359.97438 * 21 17 16 23 23 C 1.53009 * 109.50832 * 299.52605 * 9 8 7 24 24 C 1.52464 * 110.48644 * 118.54396 * 6 5 3 25 25 C 1.34916 * 124.19429 * 180.21711 * 2 1 3 26 26 O 1.21232 * 127.25588 * 359.97438 * 25 2 1 27 27 H 1.08994 * 109.47511 * 0.02959 * 1 2 3 28 28 H 1.09004 * 109.46960 * 120.02915 * 1 2 3 29 29 H 1.08998 * 109.47424 * 240.02515 * 1 2 3 30 30 H 0.97002 * 126.79300 * 180.24016 * 5 3 2 31 31 H 1.08992 * 109.45158 * 298.70119 * 7 6 5 32 32 H 1.08998 * 109.45308 * 58.63705 * 7 6 5 33 33 H 1.09000 * 109.47843 * 299.16959 * 8 7 6 34 34 H 1.08994 * 109.47895 * 179.12632 * 8 7 6 35 35 H 1.09006 * 109.46512 * 59.53493 * 9 8 7 36 36 H 0.96994 * 120.00101 * 95.03490 * 10 9 8 37 37 H 1.08996 * 109.46943 * 299.99883 * 13 11 10 38 38 H 1.08999 * 109.46829 * 59.99890 * 13 11 10 39 39 H 1.07998 * 120.00085 * 359.97438 * 15 14 13 40 40 H 1.07995 * 120.00314 * 180.23043 * 16 15 14 41 41 H 1.09002 * 109.47209 * 125.01775 * 18 17 16 42 42 H 0.96705 * 113.99729 * 59.99865 * 19 18 17 43 43 H 1.48505 * 109.99864 * 58.68054 * 20 18 17 44 44 H 1.48500 * 109.99822 * 179.97438 * 20 18 17 45 45 H 1.08006 * 119.99965 * 179.97438 * 21 17 16 46 46 H 1.08000 * 120.00389 * 179.97438 * 22 21 17 47 47 H 1.09003 * 109.47509 * 300.48655 * 23 9 8 48 48 H 1.09000 * 109.47793 * 180.45740 * 23 9 8 49 49 H 1.09000 * 109.45374 * 301.35477 * 24 6 5 50 50 H 1.08995 * 109.45306 * 61.29713 * 24 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2173 1.1073 0.0000 4 8 1.7617 2.2341 -0.0005 5 7 3.5357 0.8325 0.0058 6 6 3.6548 -0.6313 0.0036 7 6 4.3723 -1.1101 1.2609 8 6 4.4557 -2.6387 1.2533 9 6 5.2128 -3.1007 0.0064 10 7 5.3033 -4.5628 0.0040 11 6 6.2958 -5.1777 0.6775 12 8 7.1142 -4.5204 1.2851 13 6 6.3886 -6.6818 0.6755 14 6 7.5767 -7.1129 1.4962 15 6 8.8111 -7.2721 0.8946 16 6 9.9021 -7.6629 1.6483 17 6 9.7563 -7.9045 3.0016 18 6 10.9442 -8.3365 3.8221 19 8 10.7301 -9.6628 4.3088 20 14 12.4760 -8.3037 2.7622 21 6 8.5208 -7.7503 3.6021 22 6 7.4311 -7.3540 2.8496 23 6 4.4679 -2.6339 -1.2459 24 6 4.3844 -1.1053 -1.2485 25 6 2.2233 -1.1159 -0.0042 26 8 1.8376 -2.2653 -0.0082 27 1 -0.3634 1.0276 -0.0005 28 1 -0.3633 -0.5143 -0.8898 29 1 -0.3634 -0.5134 0.8902 30 1 4.2629 1.4744 0.0102 31 1 5.3784 -0.6918 1.2862 32 1 3.8204 -0.7812 2.1413 33 1 3.4494 -3.0575 1.2434 34 1 4.9824 -2.9784 2.1450 35 1 6.2162 -2.6747 0.0121 36 1 4.6490 -5.0884 -0.4822 37 1 5.4792 -7.1025 1.1045 38 1 6.5054 -7.0372 -0.3483 39 1 8.9239 -7.0880 -0.1636 40 1 10.8672 -7.7837 1.1791 41 1 11.0707 -7.6564 4.6645 42 1 10.6093 -10.3227 3.6122 43 1 12.6921 -6.9366 2.2240 44 1 13.6548 -8.7272 3.5599 45 1 8.4069 -7.9395 4.6594 46 1 6.4657 -7.2340 3.3187 47 1 3.4616 -3.0529 -1.2476 48 1 5.0033 -2.9701 -2.1338 49 1 3.8410 -0.7730 -2.1330 50 1 5.3907 -0.6869 -1.2625 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17849352_12335836.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 15:05:34 Heat of formation + Delta-G solvation = -82.397737 kcal Electronic energy + Delta-G solvation = -34217.499146 eV Core-core repulsion = 29597.763816 eV Total energy + Delta-G solvation = -4619.735330 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.172 amu Computer time = 1.38 seconds Orbital eigenvalues (eV) -43.87310 -41.25365 -40.43140 -39.89641 -38.74702 -37.64355 -37.23043 -35.94762 -34.25324 -33.78508 -32.12816 -31.91669 -30.42093 -29.15239 -28.81759 -25.88375 -24.96598 -24.11751 -23.79084 -23.21030 -22.60574 -21.98936 -21.24220 -20.54364 -19.17159 -18.45628 -18.13675 -18.04926 -17.64323 -17.42548 -16.91558 -16.71584 -16.58485 -16.50234 -16.27463 -16.07203 -15.77532 -15.67586 -15.38786 -14.99231 -14.90347 -14.66343 -14.48404 -14.31022 -14.28447 -14.06890 -13.84822 -13.71712 -13.54696 -13.42809 -13.23938 -13.04573 -12.89150 -12.74199 -12.30624 -12.25102 -12.18163 -12.00443 -11.96662 -11.80531 -11.69891 -10.95464 -10.91743 -10.89966 -10.52568 -10.43528 -10.03685 -9.85544 -9.59499 -5.03298 0.26214 0.44017 0.47325 1.12215 1.30053 1.62679 1.69466 1.81746 1.94241 1.99527 2.20443 2.74990 2.83081 3.34392 3.39982 3.51932 3.66227 3.74027 3.82205 3.90126 3.92656 3.97435 4.06277 4.07952 4.13891 4.18647 4.34352 4.36653 4.38359 4.41659 4.48442 4.48985 4.51885 4.54538 4.59436 4.65771 4.70935 4.74379 4.79201 4.87731 4.98435 5.03057 5.04681 5.10940 5.16849 5.25384 5.40005 5.55153 5.55809 5.61760 5.71070 5.88331 6.03941 6.26363 6.61343 6.76556 6.97652 7.32281 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.078 3.922 2 N -0.584 5.584 3 C 0.699 3.301 4 O -0.581 6.581 5 N -0.703 5.703 6 C 0.128 3.872 7 C -0.105 4.105 8 C -0.130 4.130 9 C 0.151 3.849 10 N -0.716 5.716 11 C 0.515 3.485 12 O -0.577 6.577 13 C -0.100 4.100 14 C -0.069 4.069 15 C -0.109 4.109 16 C -0.121 4.121 17 C -0.129 4.129 18 C -0.076 4.076 19 O -0.556 6.556 20 Si 0.782 3.218 21 C -0.110 4.110 22 C -0.117 4.117 23 C -0.126 4.126 24 C -0.106 4.106 25 C 0.529 3.471 26 O -0.469 6.469 27 H 0.093 0.907 28 H 0.091 0.909 29 H 0.087 0.913 30 H 0.452 0.548 31 H 0.104 0.896 32 H 0.072 0.928 33 H 0.075 0.925 34 H 0.060 0.940 35 H 0.080 0.920 36 H 0.416 0.584 37 H 0.125 0.875 38 H 0.135 0.865 39 H 0.145 0.855 40 H 0.143 0.857 41 H 0.099 0.901 42 H 0.395 0.605 43 H -0.291 1.291 44 H -0.298 1.298 45 H 0.120 0.880 46 H 0.129 0.871 47 H 0.081 0.919 48 H 0.097 0.903 49 H 0.085 0.915 50 H 0.109 0.891 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.470 -4.278 -6.857 8.215 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.062 4.062 2 N -0.331 5.331 3 C 0.399 3.601 4 O -0.457 6.457 5 N -0.367 5.367 6 C 0.037 3.963 7 C -0.144 4.144 8 C -0.170 4.170 9 C 0.046 3.954 10 N -0.368 5.368 11 C 0.302 3.698 12 O -0.456 6.456 13 C -0.139 4.139 14 C -0.070 4.070 15 C -0.126 4.126 16 C -0.139 4.139 17 C -0.130 4.130 18 C -0.186 4.186 19 O -0.364 6.364 20 Si 0.688 3.312 21 C -0.128 4.128 22 C -0.135 4.135 23 C -0.164 4.164 24 C -0.145 4.145 25 C 0.317 3.683 26 O -0.339 6.339 27 H 0.112 0.888 28 H 0.109 0.891 29 H 0.105 0.895 30 H 0.299 0.701 31 H 0.122 0.878 32 H 0.091 0.909 33 H 0.094 0.906 34 H 0.079 0.921 35 H 0.098 0.902 36 H 0.253 0.747 37 H 0.143 0.857 38 H 0.153 0.847 39 H 0.162 0.838 40 H 0.160 0.840 41 H 0.117 0.883 42 H 0.245 0.755 43 H -0.219 1.219 44 H -0.227 1.227 45 H 0.138 0.862 46 H 0.147 0.853 47 H 0.100 0.900 48 H 0.115 0.885 49 H 0.104 0.896 50 H 0.128 0.872 Dipole moment (debyes) X Y Z Total from point charges -0.634 -3.224 -5.984 6.827 hybrid contribution -0.576 0.740 0.784 1.222 sum -1.210 -2.484 -5.200 5.889 Atomic orbital electron populations 1.22044 0.74110 1.05397 1.04673 1.46462 1.10443 1.07891 1.68274 1.16094 0.83042 0.83775 0.77160 1.91018 1.76020 1.21829 1.56831 1.45559 1.05917 1.07570 1.77632 1.21202 0.93502 0.80853 1.00710 1.21595 1.02227 0.96302 0.94325 1.21950 1.01818 0.94394 0.98795 1.20884 0.99642 0.80271 0.94613 1.45957 1.30468 1.07340 1.52985 1.20967 0.80166 0.90951 0.77699 1.90741 1.42288 1.68090 1.44458 1.20773 0.98559 0.90829 1.03766 1.19583 0.95111 0.98405 0.93892 1.21249 0.91805 0.98539 1.01046 1.21162 0.99432 1.00240 0.93028 1.20393 0.95889 1.01943 0.94741 1.25194 1.04151 0.86310 1.02946 1.86460 1.95226 1.16461 1.38231 0.93760 0.72849 0.82596 0.81951 1.21078 0.92595 0.98958 1.00139 1.21220 0.99228 0.99152 0.93891 1.21861 1.02315 0.94544 0.97684 1.21647 1.02488 0.96274 0.94077 1.20941 0.88764 0.84583 0.74022 1.90750 1.79361 1.17936 1.45805 0.88779 0.89084 0.89454 0.70117 0.87791 0.90948 0.90631 0.92138 0.90194 0.74726 0.85655 0.84729 0.83766 0.83954 0.88336 0.75476 1.21880 1.22663 0.86224 0.85302 0.90043 0.88463 0.89640 0.87242 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 -0.15 10.89 127.77 1.39 1.24 16 2 N -0.58 -0.66 3.01 -796.76 -2.40 -3.06 16 3 C 0.70 2.44 8.63 179.37 1.55 3.99 16 4 O -0.58 -6.66 17.24 -3.85 -0.07 -6.73 16 5 N -0.70 2.62 5.88 -442.69 -2.60 0.01 16 6 C 0.13 -0.61 1.01 2.58 0.00 -0.61 16 7 C -0.11 0.48 5.10 30.45 0.16 0.64 16 8 C -0.13 0.29 5.25 30.63 0.16 0.45 16 9 C 0.15 -0.67 2.44 45.00 0.11 -0.56 16 10 N -0.72 3.94 5.08 -442.48 -2.25 1.70 16 11 C 0.51 -0.25 7.79 87.66 0.68 0.43 16 12 O -0.58 -5.35 15.70 -3.04 -0.05 -5.39 16 13 C -0.10 0.60 5.83 29.10 0.17 0.77 16 14 C -0.07 -0.02 4.37 -19.86 -0.09 -0.11 16 15 C -0.11 0.01 9.70 22.27 0.22 0.22 16 16 C -0.12 -0.08 8.67 22.27 0.19 0.11 16 17 C -0.13 -0.40 5.35 -19.86 -0.11 -0.51 16 18 C -0.08 -0.18 2.80 71.24 0.20 0.02 16 19 O -0.56 -1.30 12.83 -148.98 -1.91 -3.21 16 20 Si 0.78 -0.12 29.80 68.60 2.04 1.92 16 21 C -0.11 -0.49 9.69 22.27 0.22 -0.28 16 22 C -0.12 -0.32 9.70 22.27 0.22 -0.10 16 23 C -0.13 0.99 5.14 30.62 0.16 1.15 16 24 C -0.11 0.89 5.10 30.44 0.16 1.04 16 25 C 0.53 -0.12 6.53 87.78 0.57 0.46 16 26 O -0.47 -1.20 13.94 -2.88 -0.04 -1.24 16 27 H 0.09 -0.08 7.45 -2.39 -0.02 -0.10 16 28 H 0.09 -0.41 8.14 -2.38 -0.02 -0.43 16 29 H 0.09 -0.33 8.14 -2.39 -0.02 -0.35 16 30 H 0.45 -3.56 8.96 -92.71 -0.83 -4.39 16 31 H 0.10 -0.72 8.14 -2.39 -0.02 -0.74 16 32 H 0.07 -0.22 8.14 -2.39 -0.02 -0.24 16 33 H 0.08 -0.01 6.11 -2.39 -0.01 -0.03 16 34 H 0.06 0.12 8.14 -2.39 -0.02 0.10 16 35 H 0.08 -0.12 7.58 -2.38 -0.02 -0.14 16 36 H 0.42 -4.50 8.60 -92.71 -0.80 -5.30 16 37 H 0.13 -1.25 8.08 -2.39 -0.02 -1.27 16 38 H 0.13 -1.58 8.08 -2.39 -0.02 -1.60 16 39 H 0.14 -0.69 8.06 -2.91 -0.02 -0.71 16 40 H 0.14 -0.54 4.91 -2.91 -0.01 -0.55 16 41 H 0.10 0.44 7.96 -2.39 -0.02 0.42 16 42 H 0.40 -2.46 8.70 -74.05 -0.64 -3.11 16 43 H -0.29 -1.56 7.11 99.48 0.71 -0.86 16 44 H -0.30 -2.07 7.11 99.48 0.71 -1.36 16 45 H 0.12 0.52 8.06 -2.91 -0.02 0.49 16 46 H 0.13 0.01 8.06 -2.91 -0.02 -0.02 16 47 H 0.08 -0.46 6.11 -2.39 -0.01 -0.48 16 48 H 0.10 -1.00 8.14 -2.39 -0.02 -1.02 16 49 H 0.08 -0.71 8.14 -2.39 -0.02 -0.73 16 50 H 0.11 -1.24 8.14 -2.39 -0.02 -1.26 16 Total: 0.00 -28.77 403.55 -2.54 -31.31 By element: Atomic # 1 Polarization: -22.44 SS G_CDS: -1.22 Total: -23.66 kcal Atomic # 6 Polarization: 2.39 SS G_CDS: 5.95 Total: 8.34 kcal Atomic # 7 Polarization: 5.90 SS G_CDS: -7.25 Total: -1.35 kcal Atomic # 8 Polarization: -14.50 SS G_CDS: -2.07 Total: -16.57 kcal Atomic # 14 Polarization: -0.12 SS G_CDS: 2.04 Total: 1.92 kcal Total: -28.77 -2.54 -31.31 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17849352_12335836.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -51.089 kcal (2) G-P(sol) polarization free energy of solvation -28.769 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -79.859 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.539 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.308 kcal (6) G-S(sol) free energy of system = (1) + (5) -82.398 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.38 seconds